git: c7b296877cf8 - main - biology/viennarna: Update 2.5.0 -> 2.5.1
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Date: Sun, 31 Jul 2022 08:12:57 UTC
The branch main has been updated by yuri:
URL: https://cgit.FreeBSD.org/ports/commit/?id=c7b296877cf88cf00873673bcdcb5109ab9f3f93
commit c7b296877cf88cf00873673bcdcb5109ab9f3f93
Author: Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2022-07-31 08:09:21 +0000
Commit: Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2022-07-31 08:12:49 +0000
biology/viennarna: Update 2.5.0 -> 2.5.1
Also add test target.
---
biology/viennarna/Makefile | 4 +++-
biology/viennarna/distinfo | 6 +++---
biology/viennarna/pkg-plist | 4 ++--
3 files changed, 8 insertions(+), 6 deletions(-)
diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile
index b3efc36f81f0..31558cd140f9 100644
--- a/biology/viennarna/Makefile
+++ b/biology/viennarna/Makefile
@@ -1,5 +1,5 @@
PORTNAME= viennarna
-DISTVERSION= 2.5.0
+DISTVERSION= 2.5.1
CATEGORIES= biology
MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/
DISTNAME= ViennaRNA-${DISTVERSION}
@@ -25,6 +25,8 @@ GNU_CONFIGURE= yes
CONFIGURE_SHELL= ${PREFIX}/bin/bash
CONFIGURE_ARGS= --enable-shared --disable-static --with-gsl --with-cluster --with-kinwalker --enable-mpfr --without-python --without-python3 --without-perl
+TEST_TARGET= check
+
CONFLICTS_INSTALL= g2 # include/g2.h
INFO= RNAlib
diff --git a/biology/viennarna/distinfo b/biology/viennarna/distinfo
index a39942444d22..2805208fdbc0 100644
--- a/biology/viennarna/distinfo
+++ b/biology/viennarna/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1643064934
-SHA256 (ViennaRNA-2.5.0.tar.gz) = b85544650ee316743173ec9b30497cc4c559f1bfb8f66d16c563f780afd8c0c5
-SIZE (ViennaRNA-2.5.0.tar.gz) = 59332268
+TIMESTAMP = 1659253803
+SHA256 (ViennaRNA-2.5.1.tar.gz) = 05400437cf15595e10b1a25df6c9c48856f356130f9d1e380fa8866b6d27f457
+SIZE (ViennaRNA-2.5.1.tar.gz) = 58088049
diff --git a/biology/viennarna/pkg-plist b/biology/viennarna/pkg-plist
index 4bb410abf849..d05270d41c73 100644
--- a/biology/viennarna/pkg-plist
+++ b/biology/viennarna/pkg-plist
@@ -17,6 +17,7 @@ bin/RNAforester
bin/RNAheat
bin/RNAinverse
bin/RNAlocmin
+bin/RNAmultifold
bin/RNApaln
bin/RNAparconv
bin/RNApdist
@@ -27,7 +28,6 @@ bin/RNApvmin
bin/RNAsnoop
bin/RNAsubopt
bin/RNAup
-bin/RNAmultifold
bin/b2ct
bin/ct2db
bin/kinwalker
@@ -138,7 +138,7 @@ include/ViennaRNA/plotting/RNApuzzler/RNApuzzler.h
include/ViennaRNA/plotting/RNApuzzler/RNAturtle.h
include/ViennaRNA/plotting/alignments.h
include/ViennaRNA/plotting/layouts.h
-include/ViennaRNA/plotting/naview.h
+include/ViennaRNA/plotting/naview/naview.h
include/ViennaRNA/plotting/probabilities.h
include/ViennaRNA/plotting/structures.h
include/ViennaRNA/plotting/utils.h