git: a06965636b73 - main - biology/biolibc-tools: Update to 0.1.4
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Date: Tue, 13 Dec 2022 00:50:08 UTC
The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=a06965636b7360863524462378326b7145eaebb4
commit a06965636b7360863524462378326b7145eaebb4
Author: Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2022-12-13 00:47:59 +0000
Commit: Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2022-12-13 00:47:59 +0000
biology/biolibc-tools: Update to 0.1.4
Add deromanize subcommand to convert Roman numeral chromosome IDs
fastx-stats: Report standard deviation for read length
Changes: https://github.com/auerlab/biolibc-tools/releases
---
biology/biolibc-tools/Makefile | 3 +--
biology/biolibc-tools/distinfo | 6 +++---
biology/biolibc-tools/pkg-plist | 2 ++
3 files changed, 6 insertions(+), 5 deletions(-)
diff --git a/biology/biolibc-tools/Makefile b/biology/biolibc-tools/Makefile
index d61b832c18c2..93145af3ed79 100644
--- a/biology/biolibc-tools/Makefile
+++ b/biology/biolibc-tools/Makefile
@@ -1,6 +1,5 @@
PORTNAME= biolibc-tools
-DISTVERSION= 0.1.3
-PORTREVISION= 1
+DISTVERSION= 0.1.4
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
diff --git a/biology/biolibc-tools/distinfo b/biology/biolibc-tools/distinfo
index c74c87b2dc3e..0b136ea2f5eb 100644
--- a/biology/biolibc-tools/distinfo
+++ b/biology/biolibc-tools/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1654951264
-SHA256 (auerlab-biolibc-tools-0.1.3_GH0.tar.gz) = 0d5d983ea84e2aa8b23a4954b06f0f7b2eee033b570bf593d75a1196989b985e
-SIZE (auerlab-biolibc-tools-0.1.3_GH0.tar.gz) = 27735
+TIMESTAMP = 1670785195
+SHA256 (auerlab-biolibc-tools-0.1.4_GH0.tar.gz) = aeecef87eecc3179cf033200b75be323737b46bc31ed6828d6524ce765bd8924
+SIZE (auerlab-biolibc-tools-0.1.4_GH0.tar.gz) = 28878
diff --git a/biology/biolibc-tools/pkg-plist b/biology/biolibc-tools/pkg-plist
index f936b1acd1cf..4325c450f37b 100644
--- a/biology/biolibc-tools/pkg-plist
+++ b/biology/biolibc-tools/pkg-plist
@@ -1,5 +1,6 @@
bin/blt
libexec/biolibc-tools/chrom-lens
+libexec/biolibc-tools/deromanize
libexec/biolibc-tools/ensemblid2gene
libexec/biolibc-tools/extract-seq
libexec/biolibc-tools/fasta2seq
@@ -13,6 +14,7 @@ libexec/biolibc-tools/uniq-seqs.awk
libexec/biolibc-tools/vcf-downsample
libexec/biolibc-tools/vcf-search
man/man1/blt-chrom-lens.1.gz
+man/man1/blt-deromanize.1.gz
man/man1/blt-ensemblid2gene.1.gz
man/man1/blt-extract-seq.1.gz
man/man1/blt-fasta2seq.1.gz