git: 746a50b935da - main - biology/atac-seq: Update to 0.3.0
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Date: Thu, 05 Mar 2026 12:44:16 UTC
The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=746a50b935da1b888b10c57ee0789a39903814ce
commit 746a50b935da1b888b10c57ee0789a39903814ce
Author: Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2026-03-05 12:43:27 +0000
Commit: Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2026-03-05 12:43:27 +0000
biology/atac-seq: Update to 0.3.0
Add biology/fasda-utils to metaport depends
---
biology/atac-seq/Makefile | 9 ++++++---
biology/atac-seq/distinfo | 2 +-
2 files changed, 7 insertions(+), 4 deletions(-)
diff --git a/biology/atac-seq/Makefile b/biology/atac-seq/Makefile
index d24e8007fcf1..a35f746a21ec 100644
--- a/biology/atac-seq/Makefile
+++ b/biology/atac-seq/Makefile
@@ -1,6 +1,8 @@
PORTNAME= atac-seq
-DISTVERSION= 0.2.0
-PORTREVISION= 1
+# Update major version only if the metaport is overhauled
+# Update minor version when adding or removing dependencies
+# Update revision for all other changes
+DISTVERSION= 0.3.0
CATEGORIES= biology python
MASTER_SITES= # empty
@@ -20,6 +22,7 @@ RUN_DEPENDS= sra-tools>0:biology/sra-tools \
samtools>0:biology/samtools \
${PYTHON_PKGNAMEPREFIX}macs2>0:biology/py-macs2@${PY_FLAVOR} \
fasda>0:biology/fasda \
+ fasda-utils>0:biology/fasda-utils \
peak-classifier>0:biology/peak-classifier \
webbrowser>0:www/webbrowser \
curl>0:ftp/curl
@@ -28,7 +31,7 @@ USES= metaport python
.include <bsd.port.options.mk>
-.if ${OPSYS} != FreeBSD
+.if ${OPSYS} != FreeBSD || ${OSVERSION} >= 1302509
RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}MACS3>0:biology/py-macs3@${PY_FLAVOR}
.endif
diff --git a/biology/atac-seq/distinfo b/biology/atac-seq/distinfo
index 968e68a80fb0..7ab5dc3a527d 100644
--- a/biology/atac-seq/distinfo
+++ b/biology/atac-seq/distinfo
@@ -1 +1 @@
-TIMESTAMP = 1704902712
+TIMESTAMP = 1772714589