git: 8b579e248ab0 - main - biology/paml: Update to 4.10.10

The branch main has been updated by jrm:

URL: https://cgit.FreeBSD.org/ports/commit/?id=8b579e248ab006fc8fd4869a89fefad5fd0e4837

commit 8b579e248ab006fc8fd4869a89fefad5fd0e4837
Author:     Joseph Mingrone <jrm@FreeBSD.org>
AuthorDate: 2026-02-19 15:45:59 +0000
Commit:     Joseph Mingrone <jrm@FreeBSD.org>
CommitDate: 2026-02-19 16:08:51 +0000

    biology/paml: Update to 4.10.10
    
    Release notes:  https://github.com/abacus-gene/paml/releases/tag/v4.10.10
    Sponsored by:   The FreeBSD Foundation
---
 biology/paml/Makefile  | 2 +-
 biology/paml/distinfo  | 6 +++---
 biology/paml/pkg-plist | 7 +++++++
 3 files changed, 11 insertions(+), 4 deletions(-)

diff --git a/biology/paml/Makefile b/biology/paml/Makefile
index 4a6375689d5e..aee6e6d4c6cb 100644
--- a/biology/paml/Makefile
+++ b/biology/paml/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=	paml
 DISTVERSIONPREFIX=	v
-DISTVERSION=	4.10.9
+DISTVERSION=	4.10.10
 CATEGORIES=	biology
 
 MAINTAINER=	jrm@FreeBSD.org
diff --git a/biology/paml/distinfo b/biology/paml/distinfo
index 7dd47591a370..d949ab331862 100644
--- a/biology/paml/distinfo
+++ b/biology/paml/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1747232666
-SHA256 (abacus-gene-paml-v4.10.9_GH0.tar.gz) = 19ca9d484d729324748b9c86453e4c8f4a1fa79ad6fa3ac7cdbfaa7d0bfb8c22
-SIZE (abacus-gene-paml-v4.10.9_GH0.tar.gz) = 3920159
+TIMESTAMP = 1771514671
+SHA256 (abacus-gene-paml-v4.10.10_GH0.tar.gz) = 173e8754ad78000371099a96910f2c72b03a7b7b13c717405dc23385ae2f2c0f
+SIZE (abacus-gene-paml-v4.10.10_GH0.tar.gz) = 3835148
diff --git a/biology/paml/pkg-plist b/biology/paml/pkg-plist
index 02f053d2563e..f839843890b2 100644
--- a/biology/paml/pkg-plist
+++ b/biology/paml/pkg-plist
@@ -111,6 +111,13 @@ bin/yn00
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/brown.trees
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/codeml.ctl
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/codonml.ctl
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/combine-mcmc/README.txt
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/combine-mcmc/to_combine/mcmc_1.txt
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/combine-mcmc/to_combine/mcmc_21.txt
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/combine-mcmc/to_combine/mcmc_3.txt
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/combine-mcmc/to_combine/mcmc_5.txt
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/combine-mcmc/wrong_file/mcmc_4.txt
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/dating-cross-bracing/README.txt
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/dNdSGene1.nuc
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/dat/MtZoa.dat
 %%PORTEXAMPLES%%%%EXAMPLESDIR%%/dat/cpREV10.dat