git: 8d1e16a2ddc7 - main - science/py-pyteomics: Update to 4.7
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Date: Wed, 21 Feb 2024 15:25:05 UTC
The branch main has been updated by sunpoet:
URL: https://cgit.FreeBSD.org/ports/commit/?id=8d1e16a2ddc7d9158c02871884eb8a8664d6e09e
commit 8d1e16a2ddc7d9158c02871884eb8a8664d6e09e
Author: Po-Chuan Hsieh <sunpoet@FreeBSD.org>
AuthorDate: 2024-02-21 14:45:00 +0000
Commit: Po-Chuan Hsieh <sunpoet@FreeBSD.org>
CommitDate: 2024-02-21 15:07:59 +0000
science/py-pyteomics: Update to 4.7
- Update WWW and clean up pkg-descr
Changes: https://github.com/levitsky/pyteomics/releases
https://pyteomics.readthedocs.io/en/latest/changelog.html
---
science/py-pyteomics/Makefile | 7 ++++---
science/py-pyteomics/distinfo | 6 +++---
science/py-pyteomics/pkg-descr | 2 --
3 files changed, 7 insertions(+), 8 deletions(-)
diff --git a/science/py-pyteomics/Makefile b/science/py-pyteomics/Makefile
index 64e0de36109b..43c79b72d6a2 100644
--- a/science/py-pyteomics/Makefile
+++ b/science/py-pyteomics/Makefile
@@ -1,12 +1,13 @@
PORTNAME= pyteomics
-PORTVERSION= 4.6
+PORTVERSION= 4.7
CATEGORIES= science python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= sunpoet@FreeBSD.org
COMMENT= Python modules for proteomics data analysis
-WWW= https://pyteomics.readthedocs.io/
+WWW= https://pyteomics.readthedocs.io/en/latest/ \
+ https://github.com/levitsky/pyteomics
LICENSE= APACHE20
@@ -23,7 +24,7 @@ TDA_DESC= Target-decoy approach support
UNIMOD_DESC= Unimod database support
XML_DESC= XML support
-DF_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>=0,1:math/py-pandas@${PY_FLAVOR}
+DF_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>=0.17,1:math/py-pandas@${PY_FLAVOR}
GRAPHICS_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}matplotlib>=0:math/py-matplotlib@${PY_FLAVOR}
TDA_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR}
UNIMOD_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml>=0:devel/py-lxml@${PY_FLAVOR} \
diff --git a/science/py-pyteomics/distinfo b/science/py-pyteomics/distinfo
index 4cb721ed18e3..a19eb7280b6f 100644
--- a/science/py-pyteomics/distinfo
+++ b/science/py-pyteomics/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1684104528
-SHA256 (pyteomics-4.6.tar.gz) = a5c2ee4a36b13c388b67b7d426646dd0a5cb46d21263e4ce31503021f3b4d5d7
-SIZE (pyteomics-4.6.tar.gz) = 208133
+TIMESTAMP = 1708449436
+SHA256 (pyteomics-4.7.tar.gz) = 9f3f83da617c9e7576a927f1dd668f0725789384545e3bc1fd53401d829534c2
+SIZE (pyteomics-4.7.tar.gz) = 233773
diff --git a/science/py-pyteomics/pkg-descr b/science/py-pyteomics/pkg-descr
index f2f7b289c4ad..605aba4c6854 100644
--- a/science/py-pyteomics/pkg-descr
+++ b/science/py-pyteomics/pkg-descr
@@ -17,5 +17,3 @@ well-documented set of open tools for the wide proteomics community. One of the
project's key features is Python itself, an open source language increasingly
popular in scientific programming. The main applications of the library are
reproducible statistical data analysis and rapid software prototyping.
-
-See also: https://github.com/levitsky/pyteomics