From nobody Sun Oct 29 22:57:47 2023 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4SJWyM3fq9z4yKYQ; Sun, 29 Oct 2023 22:57:47 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4SJWyM2jSrz4qjD; Sun, 29 Oct 2023 22:57:47 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1698620267; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=J3SJUaxSaezjHd6d1BhtOy7Hb4Qpk4IiKMStRHq8/3A=; b=yo99wYPVKx5l12WNP6siQLh/B6feuB5PwrOwqrVZZq6cipwY5we7lGvTUNl0PQ5+UlsteN hY2pQa5jChGsBNAaKM7NSaZ3OL4N+b0/Bh0APHn6jBktlNrV4TeVHrBsmBsZR6XxZLR8ax R9m6HeKTwG8oN5XLloWIdNXx2sQuP4KHqoR2ROlD0AMujhpXBLbC3od3DGOo5GL9Z0NhC7 r6j8dJBGZuspQ4kM27VrojLuo0cliC9TAimvuPvkcSH/pC+wZdGixkKUbX3S3vfB9pDocz swZC95T0YR9esbeps13NYShWp0nD7PUKuWWmaMcRDNozRv0kF/3VX6efJmY2Cw== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1698620267; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=J3SJUaxSaezjHd6d1BhtOy7Hb4Qpk4IiKMStRHq8/3A=; b=FV+/k+VFU58YG2eBQRPRjq49+MT+TnKWqhIpvqx5OwD2YkxTcUVF89iZKStDXnnvmZuCsN FGNufMKlYB5OXTO+mtBq1EyodFgalrR7GgmbbNXHcrsWmDCkei+yA6Uu9xqW0/Uh08iGe9 KIuW1dmV4XGz9odHcoupbW+OCk5Vz/UsFv3aoWxBK54p8Wd3p9MKa/NYZM5pDfJQBm5G01 zdtc4nR/I1CTK9XDDlRYI4SqKN216Lw8yXMfvpZcrmv1hgToYGk1PrNiegi7VCSbBudMen MnQpOwRjnMloblsirrXoj3csx29HFTURHEkfSJZiMlEBm58YCLqxv6QLC16k0A== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1698620267; a=rsa-sha256; cv=none; b=Glou307pvL00e4X6PJrEjDxPy9NqvLoHZJXIbJkYyDekc8mqB/tDunCtorN8OlL/qjNtH3 zB4TxKeok7i038TU0JCxkX8rC5wgTVmCVDzdl49Qwwp8qTFLS+BDe/9pwU0PAIBSi7KdN+ AVZ3BGEdc8JcZNUebaYv/endQA1i8jNdmKGYBe0ALiREeb/2UWeKA9e4vpBWyBRB6YNSqA 5ggknT+/+SBVZQsdolqzql5seonQeL24VjvBYRaET1X0jYS85yrxDutFrAjBY0HsS+HWXV 1wUJRHu94ZDHdMNIKbUN0d7lGzICQukZjfMTytRyF8RWe1jlqfjHXbFS2dVQpQ== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4SJWyM1gZQzx2H; Sun, 29 Oct 2023 22:57:47 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 39TMvlPI030085; Sun, 29 Oct 2023 22:57:47 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 39TMvl0f030082; Sun, 29 Oct 2023 22:57:47 GMT (envelope-from git) Date: Sun, 29 Oct 2023 22:57:47 GMT Message-Id: <202310292257.39TMvl0f030082@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Muhammad Moinur Rahman Subject: git: 23253ea43f81 - main - biology/emboss: Optionize mysql support List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: bofh X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 23253ea43f819c9d3f5a32109a5086064908c04e Auto-Submitted: auto-generated The branch main has been updated by bofh: URL: https://cgit.FreeBSD.org/ports/commit/?id=23253ea43f819c9d3f5a32109a5086064908c04e commit 23253ea43f819c9d3f5a32109a5086064908c04e Author: Muhammad Moinur Rahman AuthorDate: 2023-10-29 19:32:37 +0000 Commit: Muhammad Moinur Rahman CommitDate: 2023-10-29 22:53:39 +0000 biology/emboss: Optionize mysql support The port builds fine without mysql and as MySQL57 is reaching end of life so optionize MYSQL so that other flavors can be used and still there is an available pkg for this port. Approved by: portmgr (blanket) --- biology/emboss/Makefile | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/biology/emboss/Makefile b/biology/emboss/Makefile index e5362ab34681..11b6b6c99fb0 100644 --- a/biology/emboss/Makefile +++ b/biology/emboss/Makefile @@ -1,6 +1,6 @@ PORTNAME= emboss PORTVERSION= 6.6.0 -PORTREVISION= 6 +PORTREVISION= 7 CATEGORIES= biology MASTER_SITES= ftp://emboss.open-bio.org/pub/EMBOSS/ DISTNAME= ${PORTNAME:tu}-${PORTVERSION} @@ -17,8 +17,7 @@ BUILD_DEPENDS= clustalw:biology/clustalw \ LIB_DEPENDS= libgd.so:graphics/gd \ libpng.so:graphics/png -USES= gmake libtool iconv mysql pgsql ssl -IGNORE_WITH_MYSQL= 80 +USES= gmake libtool iconv localbase:ldflags pgsql ssl USE_SUBMAKE= yes CONFLICTS= qmail-ldap digest @@ -29,16 +28,18 @@ GNU_CONFIGURE= yes USE_LDCONFIG= yes SUB_FILES= pkg-message emboss-shell SUB_LIST= PREFIX=${PREFIX} DATADIR=${DATADIR} -LDFLAGS+= -L${LOCALBASE}/lib CONFIGURE_ARGS+=${ICONV_CONFIGURE_ARG} INSTALL_TARGET= install-strip DOCSDIR= ${PREFIX}/share/${PORTNAME:tu}/doc DATADIR= ${PREFIX}/share/${PORTNAME:tu} -OPTIONS_DEFINE= DOCS X11 +OPTIONS_DEFINE= DOCS MYSQL X11 OPTIONS_DEFAULT= X11 + DOCS_CONFIGURE_ON= --with-docroot=${DOCSDIR} +MYSQL_USES= mysql +MYSQL_VARS= IGNORE_WITH_MYSQL=80 X11_USES= motif xorg X11_USE= XORG=x11 X11_LIB_DEPENDS= libgd.so:graphics/gd \