From nobody Sat Oct 28 11:52:57 2023 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4SHdFj5lBNz4ymN8; Sat, 28 Oct 2023 11:52:57 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4SHdFj4szCz4YXB; Sat, 28 Oct 2023 11:52:57 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1698493977; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=GVQYUd6J5aXq1yBNjnOjwcWVfFTklrrp/8sG1HLED1Y=; b=alAg+WxLlG0dzk5GZtrK2lOm+5EPlH42eRBcRr+zqrctjv7y9aRkaOr42n0T3bNqqCFw1Y CsV/M1hnlWaAHRlwXgDerrr7slhNxJ9q0Pq+pzclon7s14oHfkoSw8lI97fMMS03rAoXl9 RiPp3TOmZz3W96/9f5yMlr5QTX/7u5/wNYFh7L3B2de7S2U6Q50RZm+8XZsxPmXzluR172 oXh32cTnCofKBQDfWW4BKLI1wDGTpXivqAfePpnOZ/eXOwd4JfJU7L0clBPNdRCTNkm5UG mkLDQcAQPsVyILCjbvXA3OlyFYKxdm2oFbQwrbieOxuhDft9NLxg67/dFbwiRA== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1698493977; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=GVQYUd6J5aXq1yBNjnOjwcWVfFTklrrp/8sG1HLED1Y=; b=U8e0wQlUlWKD1nN0a2f0D6E7EcHiLbVuMaoHUEQzrWPxuPHhmC1skqWKNamCqckNnEXYMw Y+NoqHmQBgzhNo8dIZDq9n56ayP7pDIE2Stx6lheYFgjbbnwV+OWqXqIFWfGVKqGSocPoy xQb92mrwwFi5JPd1HLpWZr3lfTEnaigFYmm7s7xORIN0yjInoMo/oS86M+FkMtPcM7BQUJ 0ZOwOkFMtr0yuFO4CeVHjlUENxl/qaQoujeh/mMsphQ2mdOtlOjCRtfpdRvWoUbNERrBI1 o7Nq83Ehj25EoT7tC3MS7RT+yyeaJGSKvUs5YLBHz8H3gxabVXfwVjn9NdnJLw== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1698493977; a=rsa-sha256; cv=none; b=hm+0VQ29IqV44KF5IfG/iCpL9H5i99HCk6Tx80uYSraUXNa9cqyJdLK/TOSUojAdytzmHx wGSv89kEFG1Nx8z4kV+HkZzknenUxeNtUJtgfMkfJEQd6XAJVPaZPiGKvNIC7Amtzsz+Ve RmmLq1N0DTW+jD8oyxeDv/WK1M5p3qihRY+ViDKpUQlE63J9YaSKFNNrhmFsNyeIs/eku2 3dnT3nu2mta8RYLm67VW0WDdqExyOV1ISHIAhmQSZGubD5BLtKSQhECN2tudZyy0S8BnTg b0qSzwj2UDF8/6v5zY6ZobrjlVvSyejvAcICVrM7zH0jbXOYoDg/9ZtBqYdnqA== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4SHdFj3xqbzv9r; Sat, 28 Oct 2023 11:52:57 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 39SBqvas026685; Sat, 28 Oct 2023 11:52:57 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 39SBqvrV026682; Sat, 28 Oct 2023 11:52:57 GMT (envelope-from git) Date: Sat, 28 Oct 2023 11:52:57 GMT Message-Id: <202310281152.39SBqvrV026682@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: "Jason W. Bacon" Subject: git: b95124399e62 - main - biology/fastq-trim: Update to 0.1.3 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jwb X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: b95124399e624a235d0206c395541adddbba82a8 Auto-Submitted: auto-generated The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=b95124399e624a235d0206c395541adddbba82a8 commit b95124399e624a235d0206c395541adddbba82a8 Author: Jason W. Bacon AuthorDate: 2023-10-28 11:34:21 +0000 Commit: Jason W. Bacon CommitDate: 2023-10-28 11:34:21 +0000 biology/fastq-trim: Update to 0.1.3 fastq-scum: Add zstd and lz4 support Add low_qual_base_count update for paired end reads Clean up and expand final output format A few other minor improvements Updates for latest libxtend API Improvements to test script Changes: https://github.com/auerlab/fastq-trim/releases --- biology/fastq-trim/Makefile | 2 +- biology/fastq-trim/distinfo | 6 +++--- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/biology/fastq-trim/Makefile b/biology/fastq-trim/Makefile index 828e068b28c6..e318ef55a7fb 100644 --- a/biology/fastq-trim/Makefile +++ b/biology/fastq-trim/Makefile @@ -1,5 +1,5 @@ PORTNAME= fastq-trim -DISTVERSION= 0.1.2 +DISTVERSION= 0.1.3 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/fastq-trim/distinfo b/biology/fastq-trim/distinfo index 2a1f9a93383f..ab3a1f310215 100644 --- a/biology/fastq-trim/distinfo +++ b/biology/fastq-trim/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1670785537 -SHA256 (outpaddling-fastq-trim-0.1.2_GH0.tar.gz) = 9b265aa6cc410a20479ff60d7fd5aa02c9a89c57624290887df4b9129aa1a70c -SIZE (outpaddling-fastq-trim-0.1.2_GH0.tar.gz) = 29796 +TIMESTAMP = 1698152145 +SHA256 (outpaddling-fastq-trim-0.1.3_GH0.tar.gz) = ae40371ee7898308fef5eb20018bb5a8f5022e67307eccfac3d23084cdc0a093 +SIZE (outpaddling-fastq-trim-0.1.3_GH0.tar.gz) = 30596