git: 2650106a619a - main - biology/bifrost: Update to 1.3.0
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Date: Wed, 11 Oct 2023 12:31:59 UTC
The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=2650106a619a359d18835139e863a3ff45bb3b2e
commit 2650106a619a359d18835139e863a3ff45bb3b2e
Author: Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2023-10-11 12:29:33 +0000
Commit: Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2023-10-11 12:31:57 +0000
biology/bifrost: Update to 1.3.0
Performance and memory efficiency improvements
A few new features
Note: New index format incompatible with previous versions
Changes: https://github.com/pmelsted/bifrost/releases
Reported by: portscout
---
biology/bifrost/Makefile | 3 +--
biology/bifrost/distinfo | 6 +++---
biology/bifrost/pkg-plist | 2 +-
3 files changed, 5 insertions(+), 6 deletions(-)
diff --git a/biology/bifrost/Makefile b/biology/bifrost/Makefile
index 197f58a662dc..35c43c9b7e5b 100644
--- a/biology/bifrost/Makefile
+++ b/biology/bifrost/Makefile
@@ -1,7 +1,6 @@
PORTNAME= bifrost
DISTVERSIONPREFIX= v
-DISTVERSION= 1.2.1
-PORTREVISION= 1
+DISTVERSION= 1.3.0
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
diff --git a/biology/bifrost/distinfo b/biology/bifrost/distinfo
index f92944f13d87..0a993415bfa1 100644
--- a/biology/bifrost/distinfo
+++ b/biology/bifrost/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1688397139
-SHA256 (pmelsted-bifrost-v1.2.1_GH0.tar.gz) = fe93080ef3ea71ff009fc206b5c17dd40fbfd18293000621a83d7d947dfedf1a
-SIZE (pmelsted-bifrost-v1.2.1_GH0.tar.gz) = 905438
+TIMESTAMP = 1696948677
+SHA256 (pmelsted-bifrost-v1.3.0_GH0.tar.gz) = 621dd590a28dd61347d319ee5320718ebac3c9da356b058b8776677ce463c197
+SIZE (pmelsted-bifrost-v1.3.0_GH0.tar.gz) = 349405
diff --git a/biology/bifrost/pkg-plist b/biology/bifrost/pkg-plist
index 7d555618743c..9b4f28081aa5 100644
--- a/biology/bifrost/pkg-plist
+++ b/biology/bifrost/pkg-plist
@@ -38,9 +38,9 @@ include/bifrost/UnitigIterator.hpp
include/bifrost/UnitigIterator.tcc
include/bifrost/UnitigMap.hpp
include/bifrost/UnitigMap.tcc
+include/bifrost/fastmod.h
include/bifrost/getRSS.h
include/bifrost/kseq.h
-include/bifrost/libdivide.h
include/bifrost/libpopcnt.h
include/bifrost/minHashIterator.hpp
include/bifrost/roaring.h