git: 193567cc9e20 - main - biology/samtools: Update to 1.16.1

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From: Jason W. Bacon <jwb_at_FreeBSD.org>
Date: Thu, 05 Jan 2023 23:21:36 UTC
The branch main has been updated by jwb:

URL: https://cgit.FreeBSD.org/ports/commit/?id=193567cc9e20e9ecb305506d92f522fc77dd18e4

commit 193567cc9e20e9ecb305506d92f522fc77dd18e4
Author:     Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2023-01-05 23:17:34 +0000
Commit:     Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2023-01-05 23:17:34 +0000

    biology/samtools: Update to 1.16.1
    
    New "reference" subcommand to extract CRAM features (1.16)
    Numerous minor enhancements and bug fixes
    
    Changes: https://github.com/samtools/samtools/releases
---
 biology/samtools/Makefile  | 2 +-
 biology/samtools/distinfo  | 6 +++---
 biology/samtools/pkg-plist | 1 +
 3 files changed, 5 insertions(+), 4 deletions(-)

diff --git a/biology/samtools/Makefile b/biology/samtools/Makefile
index cbdfaa3b607b..64b06bff07e8 100644
--- a/biology/samtools/Makefile
+++ b/biology/samtools/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	samtools
-DISTVERSION=	1.15
+DISTVERSION=	1.16.1
 CATEGORIES=	biology
 
 MAINTAINER=	jwb@FreeBSD.org
diff --git a/biology/samtools/distinfo b/biology/samtools/distinfo
index 19439fbc44f5..d0c7b4cbb765 100644
--- a/biology/samtools/distinfo
+++ b/biology/samtools/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1645831653
-SHA256 (samtools-samtools-1.15_GH0.tar.gz) = 5109a17f221b36291e4bc3ad68a00c28515d4f20a16b4e23806055661ca0df31
-SIZE (samtools-samtools-1.15_GH0.tar.gz) = 4970205
+TIMESTAMP = 1672094602
+SHA256 (samtools-samtools-1.16.1_GH0.tar.gz) = 70a7f358088929272d8c22d6063290ac8420f5351fba237a99fe17851a45d8be
+SIZE (samtools-samtools-1.16.1_GH0.tar.gz) = 4992787
diff --git a/biology/samtools/pkg-plist b/biology/samtools/pkg-plist
index aafc040158e0..1d228254f042 100644
--- a/biology/samtools/pkg-plist
+++ b/biology/samtools/pkg-plist
@@ -48,6 +48,7 @@ man/man1/samtools-merge.1.gz
 man/man1/samtools-mpileup.1.gz
 man/man1/samtools-phase.1.gz
 man/man1/samtools-quickcheck.1.gz
+man/man1/samtools-reference.1.gz
 man/man1/samtools-reheader.1.gz
 man/man1/samtools-rmdup.1.gz
 man/man1/samtools-samples.1.gz