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Tue, 12 Dec 2023 21:14:19 GMT (envelope-from git) Date: Tue, 12 Dec 2023 21:14:19 GMT Message-Id: <202312122114.3BCLEJc3088798@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 5e276b8b14bd - main - science/py-nibabel: Fix the failing test List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 5e276b8b14bdcb637637955eab78baf76e435297 Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=5e276b8b14bdcb637637955eab78baf76e435297 commit 5e276b8b14bdcb637637955eab78baf76e435297 Author: Yuri Victorovich AuthorDate: 2023-12-12 20:50:32 +0000 Commit: Yuri Victorovich CommitDate: 2023-12-12 21:14:13 +0000 science/py-nibabel: Fix the failing test --- science/py-nibabel/Makefile | 1 + science/py-nibabel/files/patch-fix-tests | 37 ++++++++++++++++++++++++++++++++ 2 files changed, 38 insertions(+) diff --git a/science/py-nibabel/Makefile b/science/py-nibabel/Makefile index 3fbc19195c17..90dbc234add4 100644 --- a/science/py-nibabel/Makefile +++ b/science/py-nibabel/Makefile @@ -1,5 +1,6 @@ PORTNAME= nibabel DISTVERSION= 5.2.0 +PORTREVISION= 1 CATEGORIES= science python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/science/py-nibabel/files/patch-fix-tests b/science/py-nibabel/files/patch-fix-tests new file mode 100644 index 000000000000..1a3db66036b6 --- /dev/null +++ b/science/py-nibabel/files/patch-fix-tests @@ -0,0 +1,37 @@ +- fix for the failing test from https://github.com/nipy/nibabel/issues/1285#issuecomment-1852612513 + +diff --git nibabel/pkg_info.py nibabel/pkg_info.py +index 7e816939..7232806a 100644 +--- nibabel/pkg_info.py ++++ nibabel/pkg_info.py +@@ -1,6 +1,7 @@ + from __future__ import annotations + + import sys ++from contextlib import suppress + from subprocess import run + + from packaging.version import Version +@@ -102,14 +103,16 @@ def pkg_commit_hash(pkg_path: str | None = None) -> tuple[str, str]: + ver = Version(__version__) + if ver.local is not None and ver.local.startswith('g'): + return 'installation', ver.local[1:8] +- # maybe we are in a repository +- proc = run( +- ('git', 'rev-parse', '--short', 'HEAD'), +- capture_output=True, +- cwd=pkg_path, +- ) +- if proc.stdout: +- return 'repository', proc.stdout.decode().strip() ++ # maybe we are in a repository, but consider that we may not have git ++ with suppress(FileNotFoundError): ++ proc = run( ++ ('git', 'rev-parse', '--short', 'HEAD'), ++ capture_output=True, ++ cwd=pkg_path, ++ ) ++ if proc.stdout: ++ return 'repository', proc.stdout.decode().strip() ++ + return '(none found)', ''