git: 76fd22169df5 - main - science/py-oddt: Not install tests
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Date: Fri, 25 Mar 2022 17:28:36 UTC
The branch main has been updated by yuri:
URL: https://cgit.FreeBSD.org/ports/commit/?id=76fd22169df50b612ebe08cd19911f4d31a71e44
commit 76fd22169df50b612ebe08cd19911f4d31a71e44
Author: Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2022-03-25 17:27:03 +0000
Commit: Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2022-03-25 17:28:34 +0000
science/py-oddt: Not install tests
PR: 262759
Reported by: se@
---
science/py-oddt/Makefile | 6 ++++--
science/py-oddt/files/patch-setup.py | 13 +++++++++++++
2 files changed, 17 insertions(+), 2 deletions(-)
diff --git a/science/py-oddt/Makefile b/science/py-oddt/Makefile
index 09450612a8e3..2cda6e2cb6c6 100644
--- a/science/py-oddt/Makefile
+++ b/science/py-oddt/Makefile
@@ -1,5 +1,6 @@
PORTNAME= oddt
DISTVERSION= 0.7
+PORTREVISION= 1
CATEGORIES= science python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -9,13 +10,14 @@ COMMENT= Open Drug Discovery Toolkit
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE
-BUILD_DEPENDS= ${PYNUMPY} \
+PY_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}joblib>=0.9.4:devel/py-joblib@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pandas>=0.19.2:math/py-pandas@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scikit-learn>=0.18:science/py-scikit-learn@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scipy>=0.17:science/py-scipy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR}
-RUN_DEPENDS:= ${BUILD_DEPENDS}
+BUILD_DEPENDS= ${PY_DEPENDS}
+RUN_DEPENDS= ${PY_DEPENDS}
USES= python:3.7+
USE_GITHUB= yes
diff --git a/science/py-oddt/files/patch-setup.py b/science/py-oddt/files/patch-setup.py
new file mode 100644
index 000000000000..ce95f655591f
--- /dev/null
+++ b/science/py-oddt/files/patch-setup.py
@@ -0,0 +1,13 @@
+- same patch as suggested here: https://github.com/oddt/oddt/issues/160
+
+--- setup.py.orig 2022-03-25 17:16:33 UTC
++++ setup.py
+@@ -9,7 +9,7 @@ setup(name='oddt',
+ author_email='mwojcikowski@ibb.waw.pl',
+ url='https://github.com/oddt/oddt',
+ license='BSD',
+- packages=find_packages(),
++ packages=find_packages(exclude=['test*']),
+ package_data={'oddt.scoring.functions': ['NNScore/*.csv',
+ 'RFScore/*.csv',
+ 'PLECscore/*.json',