git: c768cdd4fe7d - main - science/massxpert: Update to 6.0.3 and adopt
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Date: Tue, 26 Apr 2022 22:52:54 UTC
The branch main has been updated by salvadore:
URL: https://cgit.FreeBSD.org/ports/commit/?id=c768cdd4fe7da71dfdaca6afd93278c44e2b0243
commit c768cdd4fe7da71dfdaca6afd93278c44e2b0243
Author: Lorenzo Salvadore <salvadore@FreeBSD.org>
AuthorDate: 2022-04-26 20:17:48 +0000
Commit: Lorenzo Salvadore <salvadore@FreeBSD.org>
CommitDate: 2022-04-26 22:51:47 +0000
science/massxpert: Update to 6.0.3 and adopt
Summary:
- Update to 6.0.3
- Remove unneeded dependency on GCC, fixing [1]
- Style improvements
- Adopt
PR: 263541 [1]
Approved by: gerald (mentor)
Differential Revision: https://reviews.freebsd.org/D35072
---
science/massxpert/Makefile | 26 +-
science/massxpert/distinfo | 6 +-
science/massxpert/files/patch-CMakeLists.txt | 40 --
science/massxpert/pkg-plist | 548 +++++++++++++++++----------
4 files changed, 354 insertions(+), 266 deletions(-)
diff --git a/science/massxpert/Makefile b/science/massxpert/Makefile
index 9042cc28d20c..892bbb753a16 100644
--- a/science/massxpert/Makefile
+++ b/science/massxpert/Makefile
@@ -1,32 +1,30 @@
# Created by: Veniamin Gvozdikov <vg@FreeBSD.org>
PORTNAME= massxpert
-DISTVERSION= 3.6.1
-PORTREVISION= 1
+DISTVERSION= 6.0.3
CATEGORIES= science
-MAINTAINER= ports@FreeBSD.org
+MAINTAINER= salvadore@FreeBSD.org
COMMENT= Software suite for (bio)chemists
LICENSE= GPLv3
-LICENSE_FILE= ${WRKSRC}/COPYING
+LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= ${LOCALBASE}/libdata/pkgconfig/pthread-stubs.pc:devel/libpthread-stubs
-LIB_DEPENDS= libpcre.so:devel/pcre \
- libpng.so:graphics/png \
+LIB_DEPENDS= libexpat.so:textproc/expat2 \
+ libfontconfig.so:x11-fonts/fontconfig \
libfreetype.so:print/freetype2 \
- libexpat.so:textproc/expat2 \
- libfontconfig.so:x11-fonts/fontconfig
+ libpcre.so:devel/pcre \
+ libpng.so:graphics/png
-USES= cmake gettext gnome qt:5 tar:bzip2 xorg
+USES= cmake gnome qt:5 tar:bzip2 xorg
USE_GITLAB= yes
GL_SITE= https://salsa.debian.org/
GL_ACCOUNT= debichem-team
-GL_COMMIT= c229f4a1abde3c20b83a90e50f9c5d79104dfa5f
-USE_GCC= yes # build breaks in clang
-USE_XORG= ice sm x11 xau xcb xdmcp xext xrender
+GL_COMMIT= a21ad33eee0314df202146392023dfb3868b7d84
USE_GNOME= glib20
-USE_QT= core gui svg xml widgets buildtools_build qmake_build
-USE_LDCONFIG= yes
+USE_QT= core gui printsupport svg widgets xml buildtools_build \
+ qmake_build
+USE_XORG= ice sm x11 xau xcb xdmcp xext xrender
.include <bsd.port.mk>
diff --git a/science/massxpert/distinfo b/science/massxpert/distinfo
index 9f194b5fbdd0..de7d96f04bdc 100644
--- a/science/massxpert/distinfo
+++ b/science/massxpert/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1617891968
-SHA256 (debichem-team-massxpert-c229f4a1abde3c20b83a90e50f9c5d79104dfa5f_GL0.tar.gz) = c1004dd4de168c29949f43691638c33afbbd63ed7986d86ef3eab4002a56806f
-SIZE (debichem-team-massxpert-c229f4a1abde3c20b83a90e50f9c5d79104dfa5f_GL0.tar.gz) = 17472107
+TIMESTAMP = 1650986428
+SHA256 (debichem-team-massxpert-a21ad33eee0314df202146392023dfb3868b7d84_GL0.tar.gz) = f220a6814a863c30dbf2ddb57c63a0de76c8cab48a89950f198063462d015ba3
+SIZE (debichem-team-massxpert-a21ad33eee0314df202146392023dfb3868b7d84_GL0.tar.gz) = 55868621
diff --git a/science/massxpert/files/patch-CMakeLists.txt b/science/massxpert/files/patch-CMakeLists.txt
deleted file mode 100644
index 0829118314de..000000000000
--- a/science/massxpert/files/patch-CMakeLists.txt
+++ /dev/null
@@ -1,40 +0,0 @@
---- CMakeLists.txt.orig 2016-07-19 13:57:16 UTC
-+++ CMakeLists.txt
-@@ -130,8 +130,8 @@ CONFIGURE_FILE(${CMAKE_SOURCE_DIR}/CMakeTemplates/conf
- # install stuff
-
- # The license file
--INSTALL(FILES COPYING
-- DESTINATION ${MASSXPERT_DOC_DIR})
-+#INSTALL(FILES COPYING
-+# DESTINATION ${MASSXPERT_DOC_DIR})
-
- # The desktop file
- IF(UNIX AND NOT APPLE)
-@@ -142,7 +142,7 @@ ENDIF(UNIX AND NOT APPLE)
- # The manual page
- IF(UNIX AND NOT APPLE)
- INSTALL(FILES massxpert.1
-- DESTINATION ${CMAKE_INSTALL_PREFIX}/share/man/man1)
-+ DESTINATION ${CMAKE_INSTALL_PREFIX}/man/man1)
- ENDIF(UNIX AND NOT APPLE)
-
-
-@@ -169,7 +169,7 @@ IF(${BUILD_DATA})
- # The manual pages(data)
- IF(UNIX AND NOT APPLE)
- INSTALL(FILES massxpert-data.7
-- DESTINATION ${CMAKE_INSTALL_PREFIX}/share/man/man7)
-+ DESTINATION ${CMAKE_INSTALL_PREFIX}/man/man7)
- ENDIF(UNIX AND NOT APPLE)
-
- #################
-@@ -213,6 +213,8 @@ IF(${BUILD_USERMANUAL})
-
- ENDIF(${BUILD_USERMANUAL})
-
-+# Fix build with Qt 5.13
-+set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -DQT_NO_DEPRECATED_WARNINGS=Y")
-
- #############################################################
- # summary
diff --git a/science/massxpert/pkg-plist b/science/massxpert/pkg-plist
index e4002e2c2c02..c2b749b2eb4f 100644
--- a/science/massxpert/pkg-plist
+++ b/science/massxpert/pkg-plist
@@ -1,210 +1,340 @@
bin/massxpert
-man/man1/massxpert.1.gz
-man/man7/massxpert-data.7.gz
-share/applications/massxpert.desktop
-%%DATADIR%%/chem_pad.conf
-%%DATADIR%%/dictionaries/codon-to-protein-1.dic
-%%DATADIR%%/dictionaries/codon-to-protein-3.dic
-%%DATADIR%%/dictionaries/pdb-protein-to-mxp.dic
-%%DATADIR%%/dictionaries/protein-1-to-3.dic
-%%DATADIR%%/dictionaries/protein-3-to-1.dic
-%%DATADIR%%/locales/massxpert_fr.qm
-%%DATADIR%%/pol-chem-defs/dna/adenine.svg
-%%DATADIR%%/pol-chem-defs/dna/biotlink.svg
-%%DATADIR%%/pol-chem-defs/dna/chem_pad.conf
-%%DATADIR%%/pol-chem-defs/dna/cross_linker_dictionary
-%%DATADIR%%/pol-chem-defs/dna/cursor.svg
-%%DATADIR%%/pol-chem-defs/dna/cytosine.svg
-%%DATADIR%%/pol-chem-defs/dna/default-cross-link-vignette.svg
-%%DATADIR%%/pol-chem-defs/dna/default-modif-vignette.svg
-%%DATADIR%%/pol-chem-defs/dna/diphospho.svg
-%%DATADIR%%/pol-chem-defs/dna/dna.xml
-%%DATADIR%%/pol-chem-defs/dna/guanine.svg
-%%DATADIR%%/pol-chem-defs/dna/methyl.svg
-%%DATADIR%%/pol-chem-defs/dna/modification_dictionary
-%%DATADIR%%/pol-chem-defs/dna/monomer_dictionary
-%%DATADIR%%/pol-chem-defs/dna/oxidation.svg
-%%DATADIR%%/pol-chem-defs/dna/phospho.svg
-%%DATADIR%%/pol-chem-defs/dna/ps-adenine.svg
-%%DATADIR%%/pol-chem-defs/dna/ps-cytosine.svg
-%%DATADIR%%/pol-chem-defs/dna/ps-guanine.svg
-%%DATADIR%%/pol-chem-defs/dna/ps-thymine.svg
-%%DATADIR%%/pol-chem-defs/dna/thymine-dimer.svg
-%%DATADIR%%/pol-chem-defs/dna/thymine.svg
-%%DATADIR%%/pol-chem-defs/dna/uracile.svg
-%%DATADIR%%/pol-chem-defs/massxpert-pol-chem-defs-cat
-%%DATADIR%%/pol-chem-defs/nucac/biotlink.svg
-%%DATADIR%%/pol-chem-defs/nucac/chem_pad.conf
-%%DATADIR%%/pol-chem-defs/nucac/cross_linker_dictionary
-%%DATADIR%%/pol-chem-defs/nucac/cursor.svg
-%%DATADIR%%/pol-chem-defs/nucac/dadenine.svg
-%%DATADIR%%/pol-chem-defs/nucac/dcytosine.svg
-%%DATADIR%%/pol-chem-defs/nucac/default-cross-link-vignette.svg
-%%DATADIR%%/pol-chem-defs/nucac/default-modif-vignette.svg
-%%DATADIR%%/pol-chem-defs/nucac/dguanine.svg
-%%DATADIR%%/pol-chem-defs/nucac/diphospho.svg
-%%DATADIR%%/pol-chem-defs/nucac/dthymine.svg
-%%DATADIR%%/pol-chem-defs/nucac/methyl.svg
-%%DATADIR%%/pol-chem-defs/nucac/modification_dictionary
-%%DATADIR%%/pol-chem-defs/nucac/monomer_dictionary
-%%DATADIR%%/pol-chem-defs/nucac/nucac.xml
-%%DATADIR%%/pol-chem-defs/nucac/oxidation.svg
-%%DATADIR%%/pol-chem-defs/nucac/phospho.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-dadenine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-dcytosine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-dguanine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-dthymine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-radenine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-rcytosine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-rguanine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ps-ruracile.svg
-%%DATADIR%%/pol-chem-defs/nucac/radenine.svg
-%%DATADIR%%/pol-chem-defs/nucac/rcytosine.svg
-%%DATADIR%%/pol-chem-defs/nucac/rguanine.svg
-%%DATADIR%%/pol-chem-defs/nucac/ruracile.svg
-%%DATADIR%%/pol-chem-defs/nucac/thymine-dimer.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/acetyl.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/alanine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/arginine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/asparagine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/aspartate.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/cfp-chromophore.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/chem_pad.conf
-%%DATADIR%%/pol-chem-defs/protein-1-letter/cross_linker_dictionary
-%%DATADIR%%/pol-chem-defs/protein-1-letter/cursor.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/cysteine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/default-cross-link-vignette.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/default-modif-vignette.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/disulfidebond-cross-link.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/glutamate.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/glutamine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/glutamylation.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/glycine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/glycylation.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/histidine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/hydroxylation.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/isoleucine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/leucine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/lysine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/methionine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/modification_dictionary
-%%DATADIR%%/pol-chem-defs/protein-1-letter/monomer_dictionary
-%%DATADIR%%/pol-chem-defs/protein-1-letter/oxidation.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/pdb-code-conversion.dic
-%%DATADIR%%/pol-chem-defs/protein-1-letter/phenylalanine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/phospho.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/pka_ph_pi.xml
-%%DATADIR%%/pol-chem-defs/protein-1-letter/proline.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/protein-1-letter.xml
-%%DATADIR%%/pol-chem-defs/protein-1-letter/protonloss.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/serine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/sulfbond.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/sulpho.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/threonine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/tryptophan.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/tyrosine.svg
-%%DATADIR%%/pol-chem-defs/protein-1-letter/valine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/acetyl.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/alanine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/arginine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/asparagine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/aspartate.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/chem_pad.conf
-%%DATADIR%%/pol-chem-defs/protein-3-letters/cross_linker_dictionary
-%%DATADIR%%/pol-chem-defs/protein-3-letters/cursor.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/cysteine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/default-cross-link-vignette.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/default-modif-vignette.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/glutamate.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/glutamine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/glycine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/histidine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/isoleucine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/leucine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/lysine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/methionine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/modification_dictionary
-%%DATADIR%%/pol-chem-defs/protein-3-letters/monomer_dictionary
-%%DATADIR%%/pol-chem-defs/protein-3-letters/oxidation.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/pdb-code-conversion.dic
-%%DATADIR%%/pol-chem-defs/protein-3-letters/phenylalanine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/phospho.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/proline.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/protein-3-letters.xml
-%%DATADIR%%/pol-chem-defs/protein-3-letters/protonloss.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/serine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/sulfbond.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/sulpho.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/threonine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/tryptophan.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/tyrosine.svg
-%%DATADIR%%/pol-chem-defs/protein-3-letters/valine.svg
-%%DATADIR%%/pol-chem-defs/saccharide/allose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/allose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/altrose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/altrose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/arabinose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/arabinose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/chem_pad.conf
-%%DATADIR%%/pol-chem-defs/saccharide/cross_linker_dictionary
-%%DATADIR%%/pol-chem-defs/saccharide/cursor.svg
-%%DATADIR%%/pol-chem-defs/saccharide/default-cross-link-vignette.svg
-%%DATADIR%%/pol-chem-defs/saccharide/default-modif-vignette.svg
-%%DATADIR%%/pol-chem-defs/saccharide/erythrose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/erythrose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/erythrulose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/erythrulose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/fructose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/fructose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/galactose-text.svg
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-%%DATADIR%%/pol-chem-defs/saccharide/glucose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/glucose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/gulose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/gulose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/idose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/idose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/lyxose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/lyxose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/mannose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/mannose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/methyl.svg
-%%DATADIR%%/pol-chem-defs/saccharide/modification_dictionary
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-%%DATADIR%%/pol-chem-defs/saccharide/psicose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/psicose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/ribose-text.svg
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-%%DATADIR%%/pol-chem-defs/saccharide/ribulose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/ribulose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/saccharide.xml
-%%DATADIR%%/pol-chem-defs/saccharide/sorbose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/sorbose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/tagatose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/tagatose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/talose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/talose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/template-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/threose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/threose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/xylose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/xylose.svg
-%%DATADIR%%/pol-chem-defs/saccharide/xylulose-text.svg
-%%DATADIR%%/pol-chem-defs/saccharide/xylulose.svg
-%%DATADIR%%/pol-seqs/17-mer-ps-po-dna-chimera.mxp
-%%DATADIR%%/pol-seqs/beta-2-tubulin.mxp
-%%DATADIR%%/pol-seqs/centrin-2-human.mxp
-%%DATADIR%%/pol-seqs/cerulean-histag.mxp
-%%DATADIR%%/pol-seqs/chicken-telokin.mxp
-%%DATADIR%%/pol-seqs/citrin-fluorescent-protein.mxp
-%%DATADIR%%/pol-seqs/cyan-fluorescent-protein-h148d-histag.mxp
-%%DATADIR%%/pol-seqs/cyan-fluorescent-protein.mxp
-%%DATADIR%%/pol-seqs/horse-myoglobin.mxp
-%%DATADIR%%/pol-seqs/insulin-a-ox.mxp
-%%DATADIR%%/pol-seqs/insulin-b-ox.mxp
-%%DATADIR%%/pol-seqs/kunitz-inhibitor-human.mxp
-%%DATADIR%%/pol-seqs/leu-enkephalin.mxp
-%%DATADIR%%/pol-seqs/protein-1-letter.mxp
-%%DATADIR%%/pol-seqs/protein-3-letters.mxp
-%%DATADIR%%/pol-seqs/tev-protease-his-tag.mxp
-%%DATADIR%%/pol-seqs/yellow-fluorescent-protein.mxp
+share/applications/org.msxpertsuite.massxpert.desktop
+share/icons/hicolor/16x16/apps/massxpert.png
+share/icons/hicolor/32x32/apps/massxpert.png
+share/icons/hicolor/48x48/apps/massxpert.png
+share/icons/hicolor/64x64/apps/massxpert.png
+share/man/man1/massxpert.1.gz
+%%DATADIR%%/data/chemPad.conf
+%%DATADIR%%/data/dictionaries/codon-to-protein-1.dic
+%%DATADIR%%/data/dictionaries/codon-to-protein-3.dic
+%%DATADIR%%/data/dictionaries/pdb-protein-to-mxp.dic
+%%DATADIR%%/data/dictionaries/protein-1-to-3.dic
+%%DATADIR%%/data/dictionaries/protein-3-to-1.dic
+%%DATADIR%%/data/polChemDefs/dna/adenine.svg
+%%DATADIR%%/data/polChemDefs/dna/biotlink.svg
+%%DATADIR%%/data/polChemDefs/dna/chemPad.conf
+%%DATADIR%%/data/polChemDefs/dna/cross_linker_dictionary
+%%DATADIR%%/data/polChemDefs/dna/cursor.svg
+%%DATADIR%%/data/polChemDefs/dna/cytosine.svg
+%%DATADIR%%/data/polChemDefs/dna/default-cross-link-vignette.svg
+%%DATADIR%%/data/polChemDefs/dna/default-modif-vignette.svg
+%%DATADIR%%/data/polChemDefs/dna/diphospho.svg
+%%DATADIR%%/data/polChemDefs/dna/dna.xml
+%%DATADIR%%/data/polChemDefs/dna/guanine.svg
+%%DATADIR%%/data/polChemDefs/dna/methyl.svg
+%%DATADIR%%/data/polChemDefs/dna/modification_dictionary
+%%DATADIR%%/data/polChemDefs/dna/monomer_dictionary
+%%DATADIR%%/data/polChemDefs/dna/oxidation.svg
+%%DATADIR%%/data/polChemDefs/dna/phospho.svg
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