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Thu, 14 Apr 2022 17:08:25 GMT (envelope-from git) Date: Thu, 14 Apr 2022 17:08:25 GMT Message-Id: <202204141708.23EH8PaJ037987@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 141e15dbe548 - main - science/tinker: Update 8.10.1 -> 8.10.2 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 141e15dbe548b454165b617856aeda003c41eddf Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1649956105; 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mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=141e15dbe548b454165b617856aeda003c41eddf commit 141e15dbe548b454165b617856aeda003c41eddf Author: Yuri Victorovich AuthorDate: 2022-04-14 16:26:53 +0000 Commit: Yuri Victorovich CommitDate: 2022-04-14 17:08:20 +0000 science/tinker: Update 8.10.1 -> 8.10.2 Reported by: portscout --- science/tinker/Makefile | 4 +++- science/tinker/distinfo | 6 +++--- science/tinker/files/patch-make_Makefile | 14 +------------- science/tinker/pkg-plist | 6 ++---- 4 files changed, 9 insertions(+), 21 deletions(-) diff --git a/science/tinker/Makefile b/science/tinker/Makefile index c4d0cbbccfd8..9f8fd995244e 100644 --- a/science/tinker/Makefile +++ b/science/tinker/Makefile @@ -1,7 +1,7 @@ # Created by: Glenn Johnson PORTNAME= tinker -DISTVERSION= 8.10.1 +DISTVERSION= 8.10.2 CATEGORIES= science MASTER_SITES= https://dasher.wustl.edu/tinker/downloads/ @@ -56,6 +56,8 @@ FFLAGS+= -mfancy-math-387 -malign-double post-extract: @${RM} ${BUILD_WRKSRC}/*.c @${RM} ${WRKSRC}/other/eopbend.orig + # remove bundled linux libraries + @${RM} ${WRKSRC}/lib/linux/* post-patch: @${REINPLACE_CMD} -i '' 's|\.\./bin/|${STAGEDIR}${PREFIX}/bin/|' ${BUILD_WRKSRC}/../bench/bench*.run diff --git a/science/tinker/distinfo b/science/tinker/distinfo index 20d4da117165..a4b276b6d825 100644 --- a/science/tinker/distinfo +++ b/science/tinker/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1633966955 -SHA256 (tinker-8.10.1.tar.gz) = 4687d60cc44c83462a15639920c4a7fe551aec6b41f295c93962d83bf4ef4f2b -SIZE (tinker-8.10.1.tar.gz) = 65197637 +TIMESTAMP = 1649951980 +SHA256 (tinker-8.10.2.tar.gz) = 7481769f3d61f81ab98e6a0950520693a6d078c4048998f388efb72c20adde40 +SIZE (tinker-8.10.2.tar.gz) = 72009856 diff --git a/science/tinker/files/patch-make_Makefile b/science/tinker/files/patch-make_Makefile index e0aa7a7b9650..6d1bf05440b7 100644 --- a/science/tinker/files/patch-make_Makefile +++ b/science/tinker/files/patch-make_Makefile @@ -1,17 +1,5 @@ ---- make/Makefile.orig 2021-09-29 02:42:24 UTC +--- make/Makefile.orig 2022-01-13 23:40:10 UTC +++ make/Makefile -@@ -87,9 +87,9 @@ APBS_LIBS = -lapbsmainroutines -lapbs -lmaloc -lapbsbl - F77 = gfortran - F77FLAGS = -c - #OPTFLAGS = -Ofast -march=native -fopenmp --OPTFLAGS = -Ofast -mssse3 -fopenmp -+OPTFLAGS = -Ofast $(PORT_SIMD_FLAGS) -fopenmp - #OPTFLAGS = -Og -fbacktrace -fcheck=bounds -Wunused -Wmaybe-uninitialized --LIBDIR = -L. -L$(TINKER_LIBDIR)/macos -+#LIBDIR = -L. -L$(TINKER_LIBDIR)/macos - LIBS = - LIBFLAGS = -crusv - RANLIB = ranlib -c @@ -803,136 +803,136 @@ listing: cat *.f *.c > tinker.txt diff --git a/science/tinker/pkg-plist b/science/tinker/pkg-plist index a38ac3839d4f..cb3939f54c62 100644 --- a/science/tinker/pkg-plist +++ b/science/tinker/pkg-plist @@ -63,7 +63,6 @@ bin/xyzint bin/xyzmol2 bin/xyzpdb %%DATADIR%%/params/0README -%%DATADIR%%/params/amber14sb.prm %%DATADIR%%/params/amber94.prm %%DATADIR%%/params/amber96.prm %%DATADIR%%/params/amber98.prm @@ -82,7 +81,6 @@ bin/xyzpdb %%DATADIR%%/params/charmm22.prm %%DATADIR%%/params/charmm22cmap.prm %%DATADIR%%/params/dang.prm -%%DATADIR%%/params/hippo19.prm %%DATADIR%%/params/hoch.prm %%DATADIR%%/params/iwater.prm %%DATADIR%%/params/mm2.prm @@ -91,7 +89,6 @@ bin/xyzpdb %%DATADIR%%/params/mmff.prm %%DATADIR%%/params/oplsaa.prm %%DATADIR%%/params/oplsaal.prm -%%DATADIR%%/params/oplsaam.prm %%DATADIR%%/params/oplsua.prm %%DATADIR%%/params/smoothaa.prm %%DATADIR%%/params/smoothua.prm @@ -201,7 +198,8 @@ bin/xyzpdb %%DATADIR%%/test/salt.key %%DATADIR%%/test/salt.log %%DATADIR%%/test/salt.run -%%DATADIR%%/test/water.key +%%DATADIR%%/test/water.amoeba +%%DATADIR%%/test/water.hippo %%DATADIR%%/test/water.log %%DATADIR%%/test/water.pot %%DATADIR%%/test/water.run