git: 0fe062bee9e2 - main - biology/gatk: Update 4.2.0.0 -> 4.2.6.0
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Date: Sun, 10 Apr 2022 23:21:54 UTC
The branch main has been updated by yuri:
URL: https://cgit.FreeBSD.org/ports/commit/?id=0fe062bee9e27456d45d17eb11044d6b406b4b27
commit 0fe062bee9e27456d45d17eb11044d6b406b4b27
Author: Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2022-04-10 22:59:14 +0000
Commit: Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2022-04-10 23:21:50 +0000
biology/gatk: Update 4.2.0.0 -> 4.2.6.0
---
biology/gatk/Makefile | 6 +++---
biology/gatk/distinfo | 10 +++++-----
2 files changed, 8 insertions(+), 8 deletions(-)
diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile
index 11e3971e5dab..4c3a2bc0147f 100644
--- a/biology/gatk/Makefile
+++ b/biology/gatk/Makefile
@@ -1,5 +1,5 @@
PORTNAME= gatk
-DISTVERSION= 4.2.0.0
+DISTVERSION= 4.2.6.0
CATEGORIES= biology java
EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX}
@@ -11,7 +11,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE.TXT
BROKEN_FreeBSD_12_powerpc64= fails to build: String index out of range: -1
-BUILD_DEPENDS= gradle62:devel/gradle62
+BUILD_DEPENDS= gradle:devel/gradle
USES= gettext-runtime
USE_GITHUB= yes
@@ -82,7 +82,7 @@ post-extract: # need a separate extract step because the cache is in /tmp, and n
.endif
do-build:
- @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle62 \
+ @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \
--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \
${GRADLE_ARGS} --build-cache localJar
diff --git a/biology/gatk/distinfo b/biology/gatk/distinfo
index 017c83417aa0..1aba6894ba0a 100644
--- a/biology/gatk/distinfo
+++ b/biology/gatk/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1615661028
-SHA256 (gatk-4.2.0.0-deps.tar.gz) = 12d2415904bae017169a3177ecd86d48f4faa7d862c0b24ccd224f0f6a95b221
-SIZE (gatk-4.2.0.0-deps.tar.gz) = 281152285
-SHA256 (broadinstitute-gatk-4.2.0.0_GH0.tar.gz) = 5766f135e372e122ce92c87e604342229228c8ceb98be1e74d52a7039e208e01
-SIZE (broadinstitute-gatk-4.2.0.0_GH0.tar.gz) = 75705393
+TIMESTAMP = 1649626976
+SHA256 (gatk-4.2.6.0-deps.tar.gz) = 8463fb40b969ef29b59663e222b00478aec5704be29ac166706457aa05cf5514
+SIZE (gatk-4.2.6.0-deps.tar.gz) = 545437623
+SHA256 (broadinstitute-gatk-4.2.6.0_GH0.tar.gz) = 6474111fd7686d06d9b6cb358c189739f15f8d720b5ce079fc0e3356e3e76bc2
+SIZE (broadinstitute-gatk-4.2.6.0_GH0.tar.gz) = 92541777