git: 0fe062bee9e2 - main - biology/gatk: Update 4.2.0.0 -> 4.2.6.0

From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Sun, 10 Apr 2022 23:21:54 UTC
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=0fe062bee9e27456d45d17eb11044d6b406b4b27

commit 0fe062bee9e27456d45d17eb11044d6b406b4b27
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2022-04-10 22:59:14 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2022-04-10 23:21:50 +0000

    biology/gatk: Update 4.2.0.0 -> 4.2.6.0
---
 biology/gatk/Makefile |  6 +++---
 biology/gatk/distinfo | 10 +++++-----
 2 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile
index 11e3971e5dab..4c3a2bc0147f 100644
--- a/biology/gatk/Makefile
+++ b/biology/gatk/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	gatk
-DISTVERSION=	4.2.0.0
+DISTVERSION=	4.2.6.0
 CATEGORIES=	biology java
 EXTRACT_ONLY=	${DISTNAME}${EXTRACT_SUFX}
 
@@ -11,7 +11,7 @@ LICENSE_FILE=	${WRKSRC}/LICENSE.TXT
 
 BROKEN_FreeBSD_12_powerpc64=	fails to build: String index out of range: -1
 
-BUILD_DEPENDS=	gradle62:devel/gradle62
+BUILD_DEPENDS=	gradle:devel/gradle
 
 USES=		gettext-runtime
 USE_GITHUB=	yes
@@ -82,7 +82,7 @@ post-extract: # need a separate extract step because the cache is in /tmp, and n
 .endif
 
 do-build:
-	@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle62 \
+	@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \
 		--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \
 		${GRADLE_ARGS} --build-cache localJar
 
diff --git a/biology/gatk/distinfo b/biology/gatk/distinfo
index 017c83417aa0..1aba6894ba0a 100644
--- a/biology/gatk/distinfo
+++ b/biology/gatk/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1615661028
-SHA256 (gatk-4.2.0.0-deps.tar.gz) = 12d2415904bae017169a3177ecd86d48f4faa7d862c0b24ccd224f0f6a95b221
-SIZE (gatk-4.2.0.0-deps.tar.gz) = 281152285
-SHA256 (broadinstitute-gatk-4.2.0.0_GH0.tar.gz) = 5766f135e372e122ce92c87e604342229228c8ceb98be1e74d52a7039e208e01
-SIZE (broadinstitute-gatk-4.2.0.0_GH0.tar.gz) = 75705393
+TIMESTAMP = 1649626976
+SHA256 (gatk-4.2.6.0-deps.tar.gz) = 8463fb40b969ef29b59663e222b00478aec5704be29ac166706457aa05cf5514
+SIZE (gatk-4.2.6.0-deps.tar.gz) = 545437623
+SHA256 (broadinstitute-gatk-4.2.6.0_GH0.tar.gz) = 6474111fd7686d06d9b6cb358c189739f15f8d720b5ce079fc0e3356e3e76bc2
+SIZE (broadinstitute-gatk-4.2.6.0_GH0.tar.gz) = 92541777