git: 0ba58a1a6f87 - main - biology/{,py-}libnuml: Update 1.1.4 -> 1.1.5

From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Thu, 07 Apr 2022 20:19:09 UTC
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=0ba58a1a6f87fc4d316f0e7a8045d9ca59d1dd0d

commit 0ba58a1a6f87fc4d316f0e7a8045d9ca59d1dd0d
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2022-04-07 18:48:54 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2022-04-07 20:19:03 +0000

    biology/{,py-}libnuml: Update 1.1.4 -> 1.1.5
    
    Reported by:    portscout
---
 biology/libnuml/Makefile                      |  6 ++++--
 biology/libnuml/distinfo                      |  6 +++---
 biology/libnuml/pkg-plist                     |  2 +-
 biology/py-libnuml/Makefile                   |  2 +-
 biology/py-libnuml/distinfo                   |  6 +++---
 biology/py-libnuml/files/patch-CMakeLists.txt | 11 +----------
 6 files changed, 13 insertions(+), 20 deletions(-)

diff --git a/biology/libnuml/Makefile b/biology/libnuml/Makefile
index 617d791e588c..56062ab85d87 100644
--- a/biology/libnuml/Makefile
+++ b/biology/libnuml/Makefile
@@ -1,7 +1,6 @@
 PORTNAME=	libnuml
 DISTVERSIONPREFIX=	v
-DISTVERSION=	1.1.4
-PORTREVISION=	1
+DISTVERSION=	1.1.5
 CATEGORIES=	biology devel
 
 MAINTAINER=	yuri@FreeBSD.org
@@ -22,6 +21,9 @@ GH_PROJECT=	NuML
 WRKSRC_SUBDIR=	${PORTNAME}
 
 post-install:
+	# no need to install LICENSE, README, VERSION
 	@${RM} -r ${STAGEDIR}${DATADIR}
+	# workaround for https://github.com/NuML/NuML/issues/26
+	${RM} -r ${STAGEDIR}${PREFIX}/share/cmake
 
 .include <bsd.port.mk>
diff --git a/biology/libnuml/distinfo b/biology/libnuml/distinfo
index 6d10a1bca0ea..7d529a2e56e3 100644
--- a/biology/libnuml/distinfo
+++ b/biology/libnuml/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1632027367
-SHA256 (NuML-NuML-v1.1.4_GH0.tar.gz) = 18e8f6d9b0c261f34123bc2e1bd601730993d63fb53f7434b5901b1059aa9109
-SIZE (NuML-NuML-v1.1.4_GH0.tar.gz) = 3419841
+TIMESTAMP = 1649355866
+SHA256 (NuML-NuML-v1.1.5_GH0.tar.gz) = ae67c85d9323f855856a17685ed3e542e90350f25df1c7d727009ee998fe63e2
+SIZE (NuML-NuML-v1.1.5_GH0.tar.gz) = 3424995
diff --git a/biology/libnuml/pkg-plist b/biology/libnuml/pkg-plist
index 44b188050119..89899b1c7f36 100644
--- a/biology/libnuml/pkg-plist
+++ b/biology/libnuml/pkg-plist
@@ -41,4 +41,4 @@ lib/cmake/numl-static-config.cmake
 lib/libnuml-static.a
 lib/libnuml.so
 lib/libnuml.so.1
-lib/libnuml.so.1.1.4
+lib/libnuml.so.1.1.5
diff --git a/biology/py-libnuml/Makefile b/biology/py-libnuml/Makefile
index 8c84750f95e5..8aabbe9f3b4b 100644
--- a/biology/py-libnuml/Makefile
+++ b/biology/py-libnuml/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=	libnuml
 DISTVERSIONPREFIX=	v
-DISTVERSION=	1.1.4
+DISTVERSION=	1.1.5
 CATEGORIES=	biology devel
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
diff --git a/biology/py-libnuml/distinfo b/biology/py-libnuml/distinfo
index 6d10a1bca0ea..a88df120ea47 100644
--- a/biology/py-libnuml/distinfo
+++ b/biology/py-libnuml/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1632027367
-SHA256 (NuML-NuML-v1.1.4_GH0.tar.gz) = 18e8f6d9b0c261f34123bc2e1bd601730993d63fb53f7434b5901b1059aa9109
-SIZE (NuML-NuML-v1.1.4_GH0.tar.gz) = 3419841
+TIMESTAMP = 1649356300
+SHA256 (NuML-NuML-v1.1.5_GH0.tar.gz) = ae67c85d9323f855856a17685ed3e542e90350f25df1c7d727009ee998fe63e2
+SIZE (NuML-NuML-v1.1.5_GH0.tar.gz) = 3424995
diff --git a/biology/py-libnuml/files/patch-CMakeLists.txt b/biology/py-libnuml/files/patch-CMakeLists.txt
index 4c2147149b24..e5cecbcf8ec9 100644
--- a/biology/py-libnuml/files/patch-CMakeLists.txt
+++ b/biology/py-libnuml/files/patch-CMakeLists.txt
@@ -1,4 +1,4 @@
---- CMakeLists.txt.orig	2021-04-29 08:24:05 UTC
+--- CMakeLists.txt.orig	2022-04-06 09:17:15 UTC
 +++ CMakeLists.txt
 @@ -62,6 +62,7 @@ ADD_CUSTOM_COMMAND(	
      OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/libnuml_wrap.cpp
@@ -20,12 +20,3 @@
  endif()
  
  
-@@ -153,7 +154,7 @@ endif()
- #
- set(PYTHON_PACKAGE_INSTALL_DIR)
- if (UNIX OR CYGWIN) 
--  execute_process(COMMAND "${PYTHON_EXECUTABLE}" -c "import sys;import platform; sys.stdout.write(platform.python_version()[:3])"
-+  execute_process(COMMAND "${PYTHON_EXECUTABLE}" -c "import sys;import platform; sys.stdout.write(platform.python_version().rsplit('.', 1)[0])"
-     OUTPUT_VARIABLE PYTHON_VERSION)
-   set(PYTHON_PACKAGE_INSTALL_DIR ${CMAKE_INSTALL_LIBDIR}/python${PYTHON_VERSION}/site-packages)
- else()