svn commit: r548989 - in head: biology/py-multiqc devel/py-fbprophet devel/py-importlab graphics/py-descartes graphics/py-geomdl graphics/py-mpl-scatter-density graphics/py-pyrsgis graphics/py-scik...
Antoine Brodin
antoine at FreeBSD.org
Sat Sep 19 14:15:48 UTC 2020
Author: antoine
Date: Sat Sep 19 14:15:42 2020
New Revision: 548989
URL: https://svnweb.freebsd.org/changeset/ports/548989
Log:
Unbreak bulk -a
Modified:
head/biology/py-multiqc/Makefile
head/devel/py-fbprophet/Makefile
head/devel/py-importlab/Makefile
head/graphics/py-descartes/Makefile
head/graphics/py-geomdl/Makefile
head/graphics/py-mpl-scatter-density/Makefile
head/graphics/py-pyrsgis/Makefile
head/graphics/py-scikit-image/Makefile
head/math/py-colormath/Makefile
head/math/py-matplotlib-scalebar/Makefile
head/math/py-matplotlib/Makefile
head/math/py-networkx/Makefile
head/math/py-networkx1/Makefile
head/math/py-python-louvain/Makefile
head/math/vtk6/Makefile
head/misc/py-gluoncv/Makefile
head/science/gnudatalanguage/Makefile
head/science/py-OpenFermion/Makefile
head/science/py-geometric/Makefile
head/science/py-lifelines/Makefile
head/science/py-obspy/Makefile
head/science/py-phono3py/Makefile
head/science/py-phonopy/Makefile
head/science/py-pyteomics/Makefile
head/science/py-scikit-fuzzy/Makefile
Modified: head/biology/py-multiqc/Makefile
==============================================================================
--- head/biology/py-multiqc/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/biology/py-multiqc/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -26,7 +26,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}spectra>=0.0.10:graphics/py-spectra@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}colormath>0:math/py-colormath@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist concurrent distutils
NO_ARCH= yes
Modified: head/devel/py-fbprophet/Makefile
==============================================================================
--- head/devel/py-fbprophet/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/devel/py-fbprophet/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -13,7 +13,7 @@ COMMENT= Forecasting time series data based on an addi
LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/LICENSE
-USES= compiler:c11 python
+USES= compiler:c11 python:3.6+
USE_PYTHON= autoplist distutils
BUILD_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}pystan>2.14:math/py-pystan@${PY_FLAVOR}
Modified: head/devel/py-importlab/Makefile
==============================================================================
--- head/devel/py-importlab/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/devel/py-importlab/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -16,7 +16,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}networkx>=0:math/py-networkx@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}six>=0:devel/py-six@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist concurrent distutils
NO_ARCH= yes
Modified: head/graphics/py-descartes/Makefile
==============================================================================
--- head/graphics/py-descartes/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/graphics/py-descartes/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -14,7 +14,7 @@ LICENSE= BSD3CLAUSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}matplotlib>=0.98:math/py-matplotlib@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist concurrent distutils
NO_ARCH= yes
Modified: head/graphics/py-geomdl/Makefile
==============================================================================
--- head/graphics/py-geomdl/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/graphics/py-geomdl/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -15,12 +15,10 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}six>=1.9.0:devel/py-six@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}numpy>=1.15.4:math/py-numpy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}matplotlib>=2.2.3:math/py-matplotlib@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}plotly>0:graphics/py-plotly@${PY_FLAVOR} \
- ${PY_TYPING}
-py27_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}backports.functools_lru_cache>=1.5:devel/py-backports.functools_lru_cache@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}plotly>0:graphics/py-plotly@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>=3.6.0:devel/py-pytest@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist distutils
NO_ARCH= yes
Modified: head/graphics/py-mpl-scatter-density/Makefile
==============================================================================
--- head/graphics/py-mpl-scatter-density/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/graphics/py-mpl-scatter-density/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -17,7 +17,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}fast-histogram>=0.3:misc/py-fast-histogram@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}matplotlib>=2.0:math/py-matplotlib@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils autoplist
NO_ARCH= yes
Modified: head/graphics/py-pyrsgis/Makefile
==============================================================================
--- head/graphics/py-pyrsgis/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/graphics/py-pyrsgis/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -17,7 +17,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}gdal>=0:graphics/p
${PYTHON_PKGNAMEPREFIX}matplotlib-scalebar>=0:math/py-matplotlib-scalebar@${PY_FLAVOR} \
${PYNUMPY}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist distutils
NO_ARCH= yes
Modified: head/graphics/py-scikit-image/Makefile
==============================================================================
--- head/graphics/py-scikit-image/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/graphics/py-scikit-image/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -27,7 +27,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}PyWavelets>=0.4:math/py-PyWavelets@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}cloudpickle>=0.2.1:devel/py-cloudpickle@${PY_FLAVOR}
-USES= cpe python
+USES= cpe python:3.6+
USE_GITHUB= yes
USE_PYTHON= autoplist concurrent distutils cython cython_run
Modified: head/math/py-colormath/Makefile
==============================================================================
--- head/math/py-colormath/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/math/py-colormath/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -16,7 +16,7 @@ LICENSE= BSD2CLAUSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.9.2,1:math/py-numpy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}networkx>=1.9.1:math/py-networkx@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist distutils
.include <bsd.port.mk>
Modified: head/math/py-matplotlib-scalebar/Makefile
==============================================================================
--- head/math/py-matplotlib-scalebar/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/math/py-matplotlib-scalebar/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -15,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}matplotlib>=0:math/py-matplotlib@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist distutils
NO_ARCH= yes
Modified: head/math/py-matplotlib/Makefile
==============================================================================
--- head/math/py-matplotlib/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/math/py-matplotlib/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -33,7 +33,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}certifi>=0.10:security/py-certifi@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}kiwisolver>=1.0.0:math/py-kiwisolver@${PY_FLAVOR}
-USES= compiler:c++11-lib gettext gnome localbase pkgconfig python shebangfix uniquefiles:dirs
+USES= compiler:c++11-lib gettext gnome localbase pkgconfig python:3.6+ shebangfix uniquefiles:dirs
USE_PYTHON= distutils
OPTIONS_DEFINE= EXAMPLES \
Modified: head/math/py-networkx/Makefile
==============================================================================
--- head/math/py-networkx/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/math/py-networkx/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -18,7 +18,7 @@ RUN_DEPENDS:= ${PYTHON_PKGNAMEPREFIX}decorator>=4.1.0:
# ${PY_SPHINX} \
# ${PYTHON_PKGNAMEPREFIX}docutils>=0.12:textproc/py-docutils@${PY_FLAVOR}
-USES= python shebangfix zip
+USES= python:3.6+ shebangfix zip
USE_PYTHON= autoplist concurrent distutils
SHEBANG_GLOB= *.py
NO_ARCH= yes
Modified: head/math/py-networkx1/Makefile
==============================================================================
--- head/math/py-networkx1/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/math/py-networkx1/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -17,7 +17,7 @@ LICENSE= BSD3CLAUSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}decorator>=3.4.0:devel/py-decorator@${PY_FLAVOR}
-USES= python shebangfix
+USES= python:3.6+ shebangfix
USE_PYTHON= autoplist concurrent distutils
NO_ARCH= yes
Modified: head/math/py-python-louvain/Makefile
==============================================================================
--- head/math/py-python-louvain/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/math/py-python-louvain/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -14,7 +14,7 @@ LICENSE= BSD3CLAUSE
RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}networkx>0:math/py-networkx@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils concurrent autoplist
NO_ARCH= yes
Modified: head/math/vtk6/Makefile
==============================================================================
--- head/math/vtk6/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/math/vtk6/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -3,7 +3,7 @@
PORTNAME= vtk
PORTVERSION= 6.2.0
-PORTREVISION= 12
+PORTREVISION= 13
CATEGORIES= math graphics
MASTER_SITES= http://www.vtk.org/files/release/${VTK_SHORT_VER}/
PKGNAMESUFFIX= 6
@@ -173,7 +173,7 @@ CMAKE_ARGS+= -DVTK_WRAP_PYTHON:BOOL=ON \
-DModule_vtkRenderingMatplotlib:BOOL=ON \
-DModule_vtkPythonInterpreter:BOOL=ON
PLIST_SUB+= PYTHON=""
-RUN_DEPENDS+= ${PYTHON_SITELIBDIR}/matplotlib/__init__.py:math/py-matplotlib@${PY_FLAVOR}
+RUN_DEPENDS+= ${PYTHON_SITELIBDIR}/matplotlib/__init__.py:math/py-matplotlib2@${PY_FLAVOR}
.else
CMAKE_ARGS+= -DVTK_WRAP_PYTHON:BOOL=OFF
PLIST_SUB+= PYTHON="@comment "
Modified: head/misc/py-gluoncv/Makefile
==============================================================================
--- head/misc/py-gluoncv/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/misc/py-gluoncv/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -23,7 +23,7 @@ PY_DEPENDS= ${PYNUMPY} \
BUILD_DEPENDS= ${PY_DEPENDS}
RUN_DEPENDS= ${PY_DEPENDS}
-USES= compiler:c11 python localbase
+USES= compiler:c11 python:3.6+ localbase
USE_GITHUB= yes
GH_ACCOUNT= dmlc
GH_PROJECT= gluon-cv
Modified: head/science/gnudatalanguage/Makefile
==============================================================================
--- head/science/gnudatalanguage/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/gnudatalanguage/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -4,7 +4,7 @@
PORTNAME= gnudatalanguage
PORTVERSION= 0.9.9
DISTVERSIONPREFIX= v
-PORTREVISION= 13
+PORTREVISION= 14
CATEGORIES= science lang
.if defined(BUILD_PYTHON_MODULE)
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -112,7 +112,7 @@ NETCDF_CMAKE_OFF= -DNETCDF:BOOL=NO
PYTHON_USES= python:2.7
PYTHON_BUILD_DEPENDS= ${PYNUMPY}
PYTHON_RUN_DEPENDS= ${PYNUMPY} \
- ${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}matplotlib2>0:math/py-matplotlib2@${PY_FLAVOR}
PYTHON_CMAKE_ON= -DPYTHON:BOOL=YES -DPYTHONVERSION:STRING="${PYTHON_VER}"
PYTHON_CMAKE_OFF= -DPYTHON:BOOL=NO
Modified: head/science/py-OpenFermion/Makefile
==============================================================================
--- head/science/py-OpenFermion/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-OpenFermion/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -12,7 +12,6 @@ COMMENT= Electronic structure package for quantum comp
LICENSE= APACHE20
LICENSE_FILE= ${WRKSRC}/LICENSE
-py27_BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}future>0:devel/py-future@${PY_FLAVOR}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}cvxopt>0:math/py-cvxopt@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}future>0:devel/py-future@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}h5py>=2.8:science/py-h5py@${PY_FLAVOR} \
@@ -22,7 +21,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}cvxopt>0:math/py-c
${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR} \
${PYNUMPY}
-USES= python
+USES= python:3.6+
USE_GITHUB= yes
GH_ACCOUNT= quantumlib
USE_PYTHON= distutils autoplist
Modified: head/science/py-geometric/Makefile
==============================================================================
--- head/science/py-geometric/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-geometric/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -15,7 +15,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}networkx>0:math/py-networkx@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils concurrent autoplist
NO_ARCH= yes
Modified: head/science/py-lifelines/Makefile
==============================================================================
--- head/science/py-lifelines/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-lifelines/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -20,7 +20,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}bottleneck>=1.0:math/py-bottleneck@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}autograd>=1.2:math/py-autograd@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist distutils
NO_ARCH= yes
Modified: head/science/py-obspy/Makefile
==============================================================================
--- head/science/py-obspy/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-obspy/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -22,7 +22,7 @@ BUILD_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}sqlalchemy10>=0:databases/py-sqlalchemy10@${PY_FLAVOR}
RUN_DEPENDS:= ${BUILD_DEPENDS}
-USES= fortran python shebangfix zip
+USES= fortran python:3.6+ shebangfix zip
SHEBANG_FILES= obspy/taup/tests/data/TauP_test_data/gendata.sh
USE_LDCONFIG= yes
LDFLAGS+= -shared
Modified: head/science/py-phono3py/Makefile
==============================================================================
--- head/science/py-phono3py/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-phono3py/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -25,7 +25,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}phonopy>=1.13.2:science/py-phonopy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
-USES= blaslapack:openblas localbase python
+USES= blaslapack:openblas localbase python:3.6+
USE_PYTHON= distutils cython autoplist
.include <bsd.port.mk>
Modified: head/science/py-phonopy/Makefile
==============================================================================
--- head/science/py-phonopy/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-phonopy/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -21,7 +21,7 @@ BUILD_DEPENDS= ${PY_DEPENDS}
RUN_DEPENDS= ${PY_DEPENDS}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}nose>0:devel/py-nose@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils cython autoplist
do-test:
Modified: head/science/py-pyteomics/Makefile
==============================================================================
--- head/science/py-pyteomics/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-pyteomics/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -11,7 +11,7 @@ COMMENT= Python modules for proteomics data analysis
LICENSE= APACHE20
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist concurrent distutils
NO_ARCH= yes
Modified: head/science/py-scikit-fuzzy/Makefile
==============================================================================
--- head/science/py-scikit-fuzzy/Makefile Sat Sep 19 14:10:08 2020 (r548988)
+++ head/science/py-scikit-fuzzy/Makefile Sat Sep 19 14:15:42 2020 (r548989)
@@ -19,7 +19,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}scipy>=0.9.0:science/py-scipy@${PY_FLAVOR}
BUILD_DEPENDS= ${RUN_DEPENDS}
-USES= python
+USES= python:3.6+
USE_PYTHON= autoplist distutils
NO_ARCH= yes
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