svn commit: r543011 - in head/biology: . rubygem-bio-old-biofetch-emulator
Sunpoet Po-Chuan Hsieh
sunpoet at FreeBSD.org
Fri Jul 24 07:08:07 UTC 2020
Author: sunpoet
Date: Fri Jul 24 07:08:05 2020
New Revision: 543011
URL: https://svnweb.freebsd.org/changeset/ports/543011
Log:
Add rubygem-bio-old-biofetch-emulator 1.0.0
bio-old-biofetch-emulator emulates Bio::Fetch object in BioRuby as if
discontinued BioRuby BioFetch server were still alive. It overrides methods and
objects in Bio::Fetch, and if the old BioRuby BioFetch server's URL is given, it
intercepts all requests and converts them into existing web services such as
TogoWS, KEGG REST API, NCBI E-Utilities, and GenomeNet(genome.jp).
WWW: https://github.com/ngoto/bioruby-old-biofetch-emulator
Added:
head/biology/rubygem-bio-old-biofetch-emulator/
head/biology/rubygem-bio-old-biofetch-emulator/Makefile (contents, props changed)
head/biology/rubygem-bio-old-biofetch-emulator/distinfo (contents, props changed)
head/biology/rubygem-bio-old-biofetch-emulator/pkg-descr (contents, props changed)
Modified:
head/biology/Makefile
Modified: head/biology/Makefile
==============================================================================
--- head/biology/Makefile Fri Jul 24 07:08:00 2020 (r543010)
+++ head/biology/Makefile Fri Jul 24 07:08:05 2020 (r543011)
@@ -149,6 +149,7 @@
SUBDIR += ruby-bio
SUBDIR += rubygem-bio
SUBDIR += rubygem-bio-executables
+ SUBDIR += rubygem-bio-old-biofetch-emulator
SUBDIR += samtools
SUBDIR += scrm
SUBDIR += seaview
Added: head/biology/rubygem-bio-old-biofetch-emulator/Makefile
==============================================================================
--- /dev/null 00:00:00 1970 (empty, because file is newly added)
+++ head/biology/rubygem-bio-old-biofetch-emulator/Makefile Fri Jul 24 07:08:05 2020 (r543011)
@@ -0,0 +1,22 @@
+# Created by: Po-Chuan Hsieh <sunpoet at FreeBSD.org>
+# $FreeBSD$
+
+PORTNAME= bio-old-biofetch-emulator
+PORTVERSION= 1.0.0
+CATEGORIES= biology rubygems
+MASTER_SITES= RG
+
+MAINTAINER= sunpoet at FreeBSD.org
+COMMENT= Emulate Bio::Fetch object
+
+LICENSE= MIT
+LICENSE_FILE= ${WRKSRC}/LICENSE.txt
+
+RUN_DEPENDS= rubygem-bio>=1.4.2:biology/rubygem-bio
+
+USES= gem
+USE_RUBY= yes
+
+NO_ARCH= yes
+
+.include <bsd.port.mk>
Added: head/biology/rubygem-bio-old-biofetch-emulator/distinfo
==============================================================================
--- /dev/null 00:00:00 1970 (empty, because file is newly added)
+++ head/biology/rubygem-bio-old-biofetch-emulator/distinfo Fri Jul 24 07:08:05 2020 (r543011)
@@ -0,0 +1,3 @@
+TIMESTAMP = 1595416509
+SHA256 (rubygem/bio-old-biofetch-emulator-1.0.0.gem) = 2cebae441cd8d680cbf76df5301b7d45a3d086974cdc016b9148a15dfb8b6d8b
+SIZE (rubygem/bio-old-biofetch-emulator-1.0.0.gem) = 11264
Added: head/biology/rubygem-bio-old-biofetch-emulator/pkg-descr
==============================================================================
--- /dev/null 00:00:00 1970 (empty, because file is newly added)
+++ head/biology/rubygem-bio-old-biofetch-emulator/pkg-descr Fri Jul 24 07:08:05 2020 (r543011)
@@ -0,0 +1,7 @@
+bio-old-biofetch-emulator emulates Bio::Fetch object in BioRuby as if
+discontinued BioRuby BioFetch server were still alive. It overrides methods and
+objects in Bio::Fetch, and if the old BioRuby BioFetch server's URL is given, it
+intercepts all requests and converts them into existing web services such as
+TogoWS, KEGG REST API, NCBI E-Utilities, and GenomeNet(genome.jp).
+
+WWW: https://github.com/ngoto/bioruby-old-biofetch-emulator
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