svn commit: r518334 - in head/biology: pbbam pbcopper pbseqan unanimity
Jason W. Bacon
jwb at FreeBSD.org
Sun Nov 24 15:53:02 UTC 2019
Author: jwb
Date: Sun Nov 24 15:53:00 2019
New Revision: 518334
URL: https://svnweb.freebsd.org/changeset/ports/518334
Log:
biology/unanimity and dependencies: Flag as no longer open source
PacBio now provides unanimity only as a binary package through bioconda.
See https://github.com/PacificBiosciences/ccs.
Modified:
head/biology/pbbam/Makefile
head/biology/pbcopper/Makefile
head/biology/pbseqan/Makefile
head/biology/unanimity/Makefile
Modified: head/biology/pbbam/Makefile
==============================================================================
--- head/biology/pbbam/Makefile Sun Nov 24 15:37:44 2019 (r518333)
+++ head/biology/pbbam/Makefile Sun Nov 24 15:53:00 2019 (r518334)
@@ -5,7 +5,9 @@ DISTVERSION= 0.18.0 # Test with biology/unanimity befo
PORTREVISION= 3
CATEGORIES= biology
-MAINTAINER= jwb at FreeBSD.org
+# As of March 2018, unanimity is no longer open source.
+# See https://github.com/PacificBiosciences/ccs.
+MAINTAINER= ports at FreeBSD.org
COMMENT= PacBio BAM C++ library, with SWIG bindings
LICENSE= BSD3CLAUSE
Modified: head/biology/pbcopper/Makefile
==============================================================================
--- head/biology/pbcopper/Makefile Sun Nov 24 15:37:44 2019 (r518333)
+++ head/biology/pbcopper/Makefile Sun Nov 24 15:53:00 2019 (r518334)
@@ -5,7 +5,9 @@ DISTVERSION= 0.4.1 # Test with biology/unanimity befor
PORTREVISION= 3
CATEGORIES= biology
-MAINTAINER= jwb at FreeBSD.org
+# As of March 2018, unanimity is no longer open source.
+# See https://github.com/PacificBiosciences/ccs.
+MAINTAINER= ports at FreeBSD.org
COMMENT= Core C++ library for Pacific Biosciences tools
LICENSE= BSD3CLAUSE
Modified: head/biology/pbseqan/Makefile
==============================================================================
--- head/biology/pbseqan/Makefile Sun Nov 24 15:37:44 2019 (r518333)
+++ head/biology/pbseqan/Makefile Sun Nov 24 15:53:00 2019 (r518334)
@@ -4,7 +4,9 @@ PORTNAME= pbseqan
DISTVERSION= g20171011
CATEGORIES= biology
-MAINTAINER= jwb at FreeBSD.org
+# As of March 2018, unanimity is no longer open source.
+# See https://github.com/PacificBiosciences/ccs.
+MAINTAINER= ports at FreeBSD.org
COMMENT= Pacific Biosciences patched and stripped down SeqAn
LICENSE= BSD3CLAUSE
Modified: head/biology/unanimity/Makefile
==============================================================================
--- head/biology/unanimity/Makefile Sun Nov 24 15:37:44 2019 (r518333)
+++ head/biology/unanimity/Makefile Sun Nov 24 15:53:00 2019 (r518334)
@@ -6,7 +6,9 @@ DISTVERSION= 3.4.1
PORTREVISION= 3
CATEGORIES= biology
-MAINTAINER= jwb at FreeBSD.org
+# As of March 2018, unanimity is no longer open source.
+# See https://github.com/PacificBiosciences/ccs.
+MAINTAINER= ports at FreeBSD.org
COMMENT= Pacific Biosciences consensus library and applications
BROKEN= unfetchable
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