svn commit: r498729 - in head/biology: . py-xenaPython

Yuri Victorovich yuri at FreeBSD.org
Fri Apr 12 17:01:12 UTC 2019


Author: yuri
Date: Fri Apr 12 17:01:10 2019
New Revision: 498729
URL: https://svnweb.freebsd.org/changeset/ports/498729

Log:
  New port: biology/py-xenaPython: API for Xena Hub to access genetic information shared through the hub

Added:
  head/biology/py-xenaPython/
  head/biology/py-xenaPython/Makefile   (contents, props changed)
  head/biology/py-xenaPython/distinfo   (contents, props changed)
  head/biology/py-xenaPython/pkg-descr   (contents, props changed)
Modified:
  head/biology/Makefile

Modified: head/biology/Makefile
==============================================================================
--- head/biology/Makefile	Fri Apr 12 16:47:41 2019	(r498728)
+++ head/biology/Makefile	Fri Apr 12 17:01:10 2019	(r498729)
@@ -123,6 +123,7 @@
     SUBDIR += py-orange3-single-cell
     SUBDIR += py-pyfaidx
     SUBDIR += py-pysam
+    SUBDIR += py-xenaPython
     SUBDIR += pycogent
     SUBDIR += pyfasta
     SUBDIR += python-nexus

Added: head/biology/py-xenaPython/Makefile
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/py-xenaPython/Makefile	Fri Apr 12 17:01:10 2019	(r498729)
@@ -0,0 +1,19 @@
+# $FreeBSD$
+
+PORTNAME=	xenaPython
+DISTVERSION=	1.0.10
+CATEGORIES=	biology python
+MASTER_SITES=	CHEESESHOP
+PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER=	yuri at FreeBSD.org
+COMMENT=	API for Xena Hub to access genetic information shared through the hub
+
+LICENSE=	APACHE20
+
+USES=		python
+USE_PYTHON=	distutils autoplist
+
+NO_ARCH=	yes
+
+.include <bsd.port.mk>

Added: head/biology/py-xenaPython/distinfo
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/py-xenaPython/distinfo	Fri Apr 12 17:01:10 2019	(r498729)
@@ -0,0 +1,3 @@
+TIMESTAMP = 1555087462
+SHA256 (xenaPython-1.0.10.tar.gz) = 1ace9085ef603a4099977e5319fce59251c8853327ddb59b84e8e3065cd80052
+SIZE (xenaPython-1.0.10.tar.gz) = 11062

Added: head/biology/py-xenaPython/pkg-descr
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/py-xenaPython/pkg-descr	Fri Apr 12 17:01:10 2019	(r498729)
@@ -0,0 +1,9 @@
+Python API for Xena Hub.
+
+Xena Hub is a Java-based server software installed on the clients' servers
+that hosts their genomic data in order to share it with others. Using this
+Python API and other browsers that are part of the UC Santa Cruz Xena project,
+it is possible to easily access a wide variety of genomic information shared by
+a large number of researchers.
+
+WWW: https://github.com/ucscXena/xenaPython


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