svn commit: r478089 - head/biology/unanimity
Jason W. Bacon
jwb at FreeBSD.org
Sat Aug 25 22:54:55 UTC 2018
Author: jwb
Date: Sat Aug 25 22:54:54 2018
New Revision: 478089
URL: https://svnweb.freebsd.org/changeset/ports/478089
Log:
biology/unanimity: Upgrade to latest release, soften dep version requirements
Approved by: jrm (mentor)
Differential Revision: https://reviews.freebsd.org/D16902
Modified:
head/biology/unanimity/Makefile
head/biology/unanimity/distinfo
Modified: head/biology/unanimity/Makefile
==============================================================================
--- head/biology/unanimity/Makefile Sat Aug 25 21:38:00 2018 (r478088)
+++ head/biology/unanimity/Makefile Sat Aug 25 22:54:54 2018 (r478089)
@@ -1,9 +1,9 @@
# $FreeBSD$
-PORTNAME= unanimity
-DISTVERSION= g20180307
-PORTREVISION= 1
-CATEGORIES= biology
+PORTNAME= unanimity
+DISTVERSIONPREFIX= v
+DISTVERSION= 3.1.0
+CATEGORIES= biology
MAINTAINER= jwb at FreeBSD.org
COMMENT= Pacific Biosciences consensus library and applications
@@ -14,16 +14,15 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
BROKEN_aarch64= fails to compile: mmintrin.h:47:5: use of undeclared identifier '__builtin_ia32_emms'; did you mean '__builtin_isless'?
# Sensitive to dependency versions, use latest commit for everything
-BUILD_DEPENDS= pbseqan==g20171002:biology/pbseqan \
- pbbam==g20180416:biology/pbbam \
- pbcopper==g20180413:biology/pbcopper
+BUILD_DEPENDS= pbseqan>=g20171002:biology/pbseqan \
+ pbbam>=g20180416:biology/pbbam \
+ pbcopper>=g20180413:biology/pbcopper
LIB_DEPENDS= libhts.so:biology/htslib \
libboost_regex.so:devel/boost-libs
USES= cmake pkgconfig python
USE_GITHUB= yes
GH_ACCOUNT= PacificBiosciences
-GH_TAGNAME= 6f11a13e1472b8c00337ba8c5e94bf83bdab31d6
CMAKE_ARGS+= -DHTSLIB_INCLUDE_DIRS:STRING=${LOCALBASE}/include/htslib \
-DHTSLIB_LIBRARIES:STRING="-L${LOCALBASE}/lib -lhts" \
Modified: head/biology/unanimity/distinfo
==============================================================================
--- head/biology/unanimity/distinfo Sat Aug 25 21:38:00 2018 (r478088)
+++ head/biology/unanimity/distinfo Sat Aug 25 22:54:54 2018 (r478089)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1524324354
-SHA256 (PacificBiosciences-unanimity-g20180307-6f11a13e1472b8c00337ba8c5e94bf83bdab31d6_GH0.tar.gz) = 20ed61c46afcfe86403a564136b96f909149208c51fde16f608e924ad4c59e38
-SIZE (PacificBiosciences-unanimity-g20180307-6f11a13e1472b8c00337ba8c5e94bf83bdab31d6_GH0.tar.gz) = 6492231
+TIMESTAMP = 1534907295
+SHA256 (PacificBiosciences-unanimity-v3.1.0_GH0.tar.gz) = 355866bd3f83bf1f7c322269c01d3c2f943e30942455741d6e802b0ad3f89912
+SIZE (PacificBiosciences-unanimity-v3.1.0_GH0.tar.gz) = 6493202
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