svn commit: r522687 - head/biology/py-macs2
Jason W. Bacon
jwb at FreeBSD.org
Sat Jan 11 14:20:01 UTC 2020
Author: jwb
Date: Sat Jan 11 14:20:00 2020
New Revision: 522687
URL: https://svnweb.freebsd.org/changeset/ports/522687
Log:
biology/py-macs2: Upgrade to 2.2.6
Bug fixes and performance improvements
Now require python 3.6+
Reported by: portscout
Modified:
head/biology/py-macs2/Makefile
head/biology/py-macs2/distinfo (contents, props changed)
Modified: head/biology/py-macs2/Makefile
==============================================================================
--- head/biology/py-macs2/Makefile Sat Jan 11 13:49:12 2020 (r522686)
+++ head/biology/py-macs2/Makefile Sat Jan 11 14:20:00 2020 (r522687)
@@ -1,28 +1,25 @@
# $FreeBSD$
-PORTNAME= macs2
-PORTVERSION= 2.1.0.p20170505
-PORTREVISION= 3
-CATEGORIES= biology python
-PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+PORTNAME= macs2
+DISTVERSIONPREFIX= v
+DISTVERSION= 2.2.6
+CATEGORIES= biology python
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= jwb at FreeBSD.org
-COMMENT= Analysis of chromatin immunoprecipitation (ChIP) sequences
+COMMENT= Identify transcription factor binding sites
LICENSE= BSD3CLAUSE
-LICENSE_FILE= ${WRKSRC}/COPYING
+LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= ${PYNUMPY}
-USES= python:2.7
+USES= python:3.6+
USE_PYTHON= autoplist concurrent cython distutils
USE_GITHUB= yes
GH_ACCOUNT= taoliu
GH_PROJECT= MACS
-GH_TAGNAME= 6946b2f
-
-PYSETUP= setup_w_cython.py
post-stage:
${STRIP_CMD} \
Modified: head/biology/py-macs2/distinfo
==============================================================================
--- head/biology/py-macs2/distinfo Sat Jan 11 13:49:12 2020 (r522686)
+++ head/biology/py-macs2/distinfo Sat Jan 11 14:20:00 2020 (r522687)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1512241922
-SHA256 (taoliu-MACS-2.1.0.p20170505-6946b2f_GH0.tar.gz) = c6e4fb8b69b955134399fcdfc075cea5fbc29fabbc46cc4e9acdedeb1174fcfd
-SIZE (taoliu-MACS-2.1.0.p20170505-6946b2f_GH0.tar.gz) = 159560613
+TIMESTAMP = 1578626999
+SHA256 (taoliu-MACS-v2.2.6_GH0.tar.gz) = 7c51561787d15d85370b11c9121e4ab7174ce11cfde36043b9ee95de8451db3a
+SIZE (taoliu-MACS-v2.2.6_GH0.tar.gz) = 133721230
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