svn commit: r476726 - in head: . science science/xdrawchem science/xdrawchem/files
Yuri Victorovich
yuri at FreeBSD.org
Thu Aug 9 08:13:12 UTC 2018
Author: yuri
Date: Thu Aug 9 08:13:10 2018
New Revision: 476726
URL: https://svnweb.freebsd.org/changeset/ports/476726
Log:
Re-add port: science/xdrawchem: Two-dimensional molecule drawing program
Added:
head/science/xdrawchem/
- copied from r323747, head/biology/xdrawchem/
Deleted:
head/science/xdrawchem/files/
Modified:
head/MOVED
head/science/Makefile
head/science/xdrawchem/Makefile
head/science/xdrawchem/distinfo
head/science/xdrawchem/pkg-descr
head/science/xdrawchem/pkg-plist
Modified: head/MOVED
==============================================================================
--- head/MOVED Thu Aug 9 08:01:28 2018 (r476725)
+++ head/MOVED Thu Aug 9 08:13:10 2018 (r476726)
@@ -4423,7 +4423,6 @@ audio/mpeglib_artsplug||2013-07-26|Has expired: Depend
audio/prokyon3||2013-07-26|Has expired: Depends on Qt 3.x
audio/xmms-kde||2013-07-26|Has expired: Depends on Qt 3.x
audio/yammi||2013-07-26|Has expired: Depends on Qt 3.x
-biology/xdrawchem||2013-07-26|Has expired: Depends on Qt 3.x
cad/opencascade-tutorial||2013-07-26|Has expired: Depends on Qt 3.x
cad/vipec||2013-07-26|Has expired: Depends on Qt 3.x
chinese/kde3-i18n-zh_CN||2013-07-26|Has expired: Depends on Qt 3.x
Modified: head/science/Makefile
==============================================================================
--- head/science/Makefile Thu Aug 9 08:01:28 2018 (r476725)
+++ head/science/Makefile Thu Aug 9 08:13:10 2018 (r476726)
@@ -247,6 +247,7 @@
SUBDIR += vmd
SUBDIR += voro++
SUBDIR += xcrysden
+ SUBDIR += xdrawchem
SUBDIR += xfce4-equake-plugin
SUBDIR += xmakemol
Modified: head/science/xdrawchem/Makefile
==============================================================================
--- head/biology/xdrawchem/Makefile Fri Jul 26 19:14:50 2013 (r323747)
+++ head/science/xdrawchem/Makefile Thu Aug 9 08:13:10 2018 (r476726)
@@ -1,37 +1,26 @@
-# Created by: trevor
# $FreeBSD$
PORTNAME= xdrawchem
-PORTVERSION= 1.9.9
-PORTREVISION= 11
-CATEGORIES= biology
-MASTER_SITES= SF
+DISTVERSION= 1.10.2-1
+CATEGORIES= science
-MAINTAINER= hemi at puresimplicity.net
-COMMENT= Chemical drawing program
+MAINTAINER= yuri at FreeBSD.org
+COMMENT= Two-dimensional molecule drawing program
-LIB_DEPENDS= openbabel:${PORTSDIR}/science/openbabel
+LICENSE= GPLv2
+LICENSE_FILE= ${WRKSRC}/doc/GPL.txt
-GNU_CONFIGURE= yes
-USE_GMAKE= yes
-USE_QT_VER= 3
+LIB_DEPENDS= libopenbabel.so:science/openbabel
-CONFIGURE_ENV= QTINCDIR="${LOCALBASE}/include" \
- QTLIBDIR="${LOCALBASE}/lib"
-LDFLAGS+= -lm
+USES= qmake qt:5
+USE_GITHUB= yes
+GH_ACCOUNT= bryanherger
+USE_QT= core gui network printsupport widgets xml buildtools_build
+USE_GL= gl
-MAKE_ARGS+= LDFLAGS+="-lqt-mt ${PTHREAD_LIBS}"
+WRKSRC_SUBDIR= ${PORTNAME}-qt5
-.include <bsd.port.pre.mk>
+post-install:
+ @${STRIP_CMD} ${STAGEDIR}${PREFIX}/bin/${PORTNAME}
-.if ${ARCH}==sparc64
-BROKEN= does not compile on ${ARCH}
-.endif
-
-post-patch:
- @${REINPLACE_CMD} -e \
- 's|malloc\.h|stdlib.h|g' ${WRKSRC}/xdrawchem/application_ob.cpp
- @${REINPLACE_CMD} -e \
- 's|lround|(long int)rint|g' ${WRKSRC}/xdrawchem/*.cpp
-
-.include <bsd.port.post.mk>
+.include <bsd.port.mk>
Modified: head/science/xdrawchem/distinfo
==============================================================================
--- head/biology/xdrawchem/distinfo Fri Jul 26 19:14:50 2013 (r323747)
+++ head/science/xdrawchem/distinfo Thu Aug 9 08:13:10 2018 (r476726)
@@ -1,2 +1,3 @@
-SHA256 (xdrawchem-1.9.9.tar.gz) = 33e45ee8b937ba4ea77fb28adca66195943715a941039a95d0a4bed09d4cf9e3
-SIZE (xdrawchem-1.9.9.tar.gz) = 982481
+TIMESTAMP = 1533775206
+SHA256 (bryanherger-xdrawchem-1.10.2-1_GH0.tar.gz) = 009b525e570cd79b3e59880877871e258071fecdef6c397d7533f3920faa9a7e
+SIZE (bryanherger-xdrawchem-1.10.2-1_GH0.tar.gz) = 2888990
Modified: head/science/xdrawchem/pkg-descr
==============================================================================
--- head/biology/xdrawchem/pkg-descr Fri Jul 26 19:14:50 2013 (r323747)
+++ head/science/xdrawchem/pkg-descr Thu Aug 9 08:13:10 2018 (r476726)
@@ -1,10 +1,8 @@
-from the Web page and the Freshmeat listing:
-
XDrawChem is a program for drawing chemical structures in two
-dimensions. It comes with a library of amino acids and nucleic
-acids. It can read and write MDL Molfiles, read and write CML
+dimensions. It comes with a library of amino acids and nucleic
+acids. It can read and write MDL Molfiles, read and write CML
(Chemical Markup Language), read (some?) ChemDraw XML and binary
-files, and export to EPS. It can predict 13C NMR and simple IR
-spectra. It works under Unix or Windows.
+files, and export to EPS. It can predict 13C NMR and simple IR
+spectra. It works under Unix or Windows.
-WWW: http://xdrawchem.sourceforge.net
+WWW: https://www.woodsidelabs.com/chemistry/xdrawchem.php
Modified: head/science/xdrawchem/pkg-plist
==============================================================================
--- head/biology/xdrawchem/pkg-plist Fri Jul 26 19:14:50 2013 (r323747)
+++ head/science/xdrawchem/pkg-plist Thu Aug 9 08:13:10 2018 (r476726)
@@ -1,10 +1,17 @@
bin/xdrawchem
%%DATADIR%%/6ring_boat.cml
+%%DATADIR%%/6ring_boat.png
%%DATADIR%%/6ring_chair.cml
+%%DATADIR%%/6ring_chair.png
+%%DATADIR%%/CMakeLists.txt
+%%DATADIR%%/COPYRIGHT.txt
+%%DATADIR%%/GPL.txt
+%%DATADIR%%/HISTORY.txt
%%DATADIR%%/adenine.cml
%%DATADIR%%/alanine.cml
%%DATADIR%%/anthracene.cml
%%DATADIR%%/arginine.cml
+%%DATADIR%%/arrowtool.png
%%DATADIR%%/asparagine.cml
%%DATADIR%%/aspartic_acid.cml
%%DATADIR%%/back.xpm
@@ -13,17 +20,26 @@ bin/xdrawchem
%%DATADIR%%/biotin.cml
%%DATADIR%%/biphenyl.cml
%%DATADIR%%/boc.cml
+%%DATADIR%%/boldtool.png
+%%DATADIR%%/brackettool.png
%%DATADIR%%/caslist.txt
+%%DATADIR%%/chaintool.png
+%%DATADIR%%/copytool.png
+%%DATADIR%%/curvearrowtool.png
+%%DATADIR%%/cuttool.png
%%DATADIR%%/cyclobutane.cml
+%%DATADIR%%/cyclobutane.png
%%DATADIR%%/cycloheptane.cml
%%DATADIR%%/cyclohexane.cml
%%DATADIR%%/cyclohexane.png
%%DATADIR%%/cyclooctane.cml
%%DATADIR%%/cyclopentadiene-sp.cml
%%DATADIR%%/cyclopentadiene.cml
+%%DATADIR%%/cyclopentadiene.png
%%DATADIR%%/cyclopentane.cml
%%DATADIR%%/cyclopentane.png
%%DATADIR%%/cyclopropane.cml
+%%DATADIR%%/cyclopropane.png
%%DATADIR%%/cysteine.cml
%%DATADIR%%/cytosine.cml
%%DATADIR%%/d-fructose.cml
@@ -31,6 +47,7 @@ bin/xdrawchem
%%DATADIR%%/dabcyl.cml
%%DATADIR%%/dabsyl.cml
%%DATADIR%%/dansyl.cml
+%%DATADIR%%/dashtool.png
%%DATADIR%%/deoxyribose.cml
%%DATADIR%%/doc/COPYRIGHT.txt
%%DATADIR%%/doc/GPL.txt
@@ -38,6 +55,9 @@ bin/xdrawchem
%%DATADIR%%/doc/arrowtool.png
%%DATADIR%%/doc/boldtool.png
%%DATADIR%%/doc/brackettool.png
+%%DATADIR%%/doc/cb.png
+%%DATADIR%%/doc/cbf.png
+%%DATADIR%%/doc/cbh.png
%%DATADIR%%/doc/cinna.png
%%DATADIR%%/doc/color_pulldown.png
%%DATADIR%%/doc/copytool.png
@@ -78,7 +98,15 @@ bin/xdrawchem
%%DATADIR%%/doc/toolmenu.html
%%DATADIR%%/doc/underlinetool.png
%%DATADIR%%/doc/uptool.png
+%%DATADIR%%/downtool.png
%%DATADIR%%/edans.cml
+%%DATADIR%%/editcut.png
+%%DATADIR%%/editpaste.png
+%%DATADIR%%/erasetool.png
+%%DATADIR%%/filenew.png
+%%DATADIR%%/fileopen.png
+%%DATADIR%%/fileprint.png
+%%DATADIR%%/filesave.png
%%DATADIR%%/fmoc.cml
%%DATADIR%%/forward.xpm
%%DATADIR%%/glutamic_acid.cml
@@ -91,26 +119,56 @@ bin/xdrawchem
%%DATADIR%%/imidazole.png
%%DATADIR%%/indole.cml
%%DATADIR%%/isoleucine.cml
+%%DATADIR%%/italictool.png
+%%DATADIR%%/justifycentertool.png
+%%DATADIR%%/justifylefttool.png
+%%DATADIR%%/justifyrighttool.png
+%%DATADIR%%/lassotool.png
%%DATADIR%%/leucine.cml
+%%DATADIR%%/line1.png
+%%DATADIR%%/line2.png
+%%DATADIR%%/line3.png
+%%DATADIR%%/line4.png
+%%DATADIR%%/line5.png
+%%DATADIR%%/linetool.png
%%DATADIR%%/lysine.cml
+%%DATADIR%%/mag_minus.png
+%%DATADIR%%/mag_plus.png
%%DATADIR%%/methionine.cml
%%DATADIR%%/naphthalene.cml
%%DATADIR%%/nitrophenylalanine.cml
+%%DATADIR%%/pastetool.png
%%DATADIR%%/phenylalanine.cml
%%DATADIR%%/proline.cml
%%DATADIR%%/purine.cml
%%DATADIR%%/pyrimidine.cml
%%DATADIR%%/retro.txt
%%DATADIR%%/ribose.cml
+%%DATADIR%%/ringtool.png
+%%DATADIR%%/selecttool.png
%%DATADIR%%/serine.cml
%%DATADIR%%/statine.cml
%%DATADIR%%/steroid.cml
+%%DATADIR%%/subscript.png
+%%DATADIR%%/superscript.png
+%%DATADIR%%/sym_1e.png
+%%DATADIR%%/sym_2e.png
+%%DATADIR%%/sym_2e_line.png
+%%DATADIR%%/sym_delta_minus.png
+%%DATADIR%%/sym_delta_plus.png
+%%DATADIR%%/sym_minus.png
+%%DATADIR%%/sym_plus.png
+%%DATADIR%%/symboltool.png
+%%DATADIR%%/texttool.png
%%DATADIR%%/threonine.cml
%%DATADIR%%/thymine.cml
%%DATADIR%%/tryptophan.cml
%%DATADIR%%/tyrosine.cml
+%%DATADIR%%/underlinetool.png
+%%DATADIR%%/uptool.png
%%DATADIR%%/uracil.cml
%%DATADIR%%/valine.cml
+%%DATADIR%%/wavytool.png
%%DATADIR%%/xdrawchem-icon.png
%%DATADIR%%/xdrawchem_da.qm
%%DATADIR%%/xdrawchem_de.qm
@@ -122,5 +180,3 @@ bin/xdrawchem
%%DATADIR%%/xdrawchem_pl.qm
%%DATADIR%%/xdrawchem_ru.qm
%%DATADIR%%/xdrawchemrc
- at dirrm %%DATADIR%%/doc
- at dirrm %%DATADIR%%
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