svn commit: r391503 - head/biology/seqtools
Kurt Jaeger
pi at FreeBSD.org
Tue Jul 7 14:17:53 UTC 2015
Author: pi
Date: Tue Jul 7 14:17:51 2015
New Revision: 391503
URL: https://svnweb.freebsd.org/changeset/ports/391503
Log:
biology/seqtools: 4.34.1 -> 4.35
- Blixem bug fix in sorting features, RT 473624
- Compilation of the seqtools in parallel, RT 467905
- Fix bug with sorting by similarity/identity to first sequence (RT:473624)
- Fix an error compiling with multiple threads (RT:467905)
Modified:
head/biology/seqtools/Makefile
head/biology/seqtools/distinfo
Modified: head/biology/seqtools/Makefile
==============================================================================
--- head/biology/seqtools/Makefile Tue Jul 7 11:48:02 2015 (r391502)
+++ head/biology/seqtools/Makefile Tue Jul 7 14:17:51 2015 (r391503)
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= seqtools
-PORTVERSION= 4.34.1
+PORTVERSION= 4.35
CATEGORIES= biology
MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/seqtools/PRODUCTION/
@@ -17,8 +17,8 @@ USES= execinfo pkgconfig
GNU_CONFIGURE= yes
USE_GCC= any
USE_GNOME= gtk20
-CFLAGS= -I${LOCALBASE}/include
-LDFLAGS= -L${LOCALBASE}/lib -lexecinfo -lcurl -lsqlite3 -lm
+CFLAGS+= -I${LOCALBASE}/include
+LDFLAGS+= -L${LOCALBASE}/lib -lexecinfo -lcurl -lsqlite3 -lm
MAKE_JOBS_UNSAFE= yes
OPTIONS_DEFINE= DOCS
Modified: head/biology/seqtools/distinfo
==============================================================================
--- head/biology/seqtools/distinfo Tue Jul 7 11:48:02 2015 (r391502)
+++ head/biology/seqtools/distinfo Tue Jul 7 14:17:51 2015 (r391503)
@@ -1,2 +1,2 @@
-SHA256 (seqtools-4.34.1.tar.gz) = 77c383d151fd19faa2d24aa3444d4d19527464d0823b58d5a40857fd494a595a
-SIZE (seqtools-4.34.1.tar.gz) = 3267808
+SHA256 (seqtools-4.35.tar.gz) = 3465c40527a1a7255209f66d88275afa7e3b17f831fa833c5f8bf94c7a913d9d
+SIZE (seqtools-4.35.tar.gz) = 5594161
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