[Bug 199747] [NEW PORT] biology/bcftools

bugzilla-noreply at freebsd.org bugzilla-noreply at freebsd.org
Tue Apr 28 01:38:04 UTC 2015


https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=199747

            Bug ID: 199747
           Summary: [NEW PORT] biology/bcftools
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: freebsd-ports-bugs at FreeBSD.org
          Reporter: cartwright at asu.edu

Created attachment 156059
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=156059&action=edit
patch to add biology/bcftools

BCFtools is a set of utilities that manipulate variant calls in the Variant
Call Format (VCF) and its binary counterpart BCF. All commands work
transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.

It is the companion to the biology/samtools and biology/htslib ports that I
already maintain.

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