ports/171115: [Update]biology/py-biopython:update to 1.60
Wen Heping
wen at FreeBSD.org
Mon Aug 27 12:10:05 UTC 2012
>Number: 171115
>Category: ports
>Synopsis: [Update]biology/py-biopython:update to 1.60
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: update
>Submitter-Id: current-users
>Arrival-Date: Mon Aug 27 12:10:04 UTC 2012
>Closed-Date:
>Last-Modified:
>Originator: Wen Heping
>Release: FreeBSD-Head
>Organization:
FreeBSD
>Environment:
>Description:
- Update to 1.60
>How-To-Repeat:
>Fix:
--- Makefile.orig 2012-08-27 15:39:19.000000000 +0800
+++ Makefile 2012-08-27 11:29:53.000000000 +0800
@@ -2,11 +2,11 @@
# Date created: 28 July 2000
# Whom: Johann Visagie <johann at egenetics.com>
#
-# $FreeBSD: head/biology/py-biopython/Makefile 300895 2012-07-14 12:56:14Z beat $
+# $FreeBSD: ports/biology/py-biopython/Makefile,v 1.33 2012/03/06 06:40:50 wen Exp $
#
PORTNAME= biopython
-PORTVERSION= 1.59
+PORTVERSION= 1.60
CATEGORIES= biology python
MASTER_SITES= http://www.biopython.org/DIST/
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
--- distinfo.orig 2012-08-27 15:39:19.000000000 +0800
+++ distinfo 2012-08-27 11:30:11.000000000 +0800
@@ -1,2 +1,2 @@
-SHA256 (biopython-1.59.tar.gz) = 588abf55de3d8e4deac611a0f810a9c5d9ce7e5868d3064f79efe6cabd18cacb
-SIZE (biopython-1.59.tar.gz) = 8577492
+SHA256 (biopython-1.60.tar.gz) = 73a2e6d700c8735832b6fc15dd08a9baa4136b072ff18760b9d22f563579d733
+SIZE (biopython-1.60.tar.gz) = 9501707
--- pkg-plist.orig 2012-08-27 15:39:19.000000000 +0800
+++ pkg-plist 2012-08-27 19:26:03.000000000 +0800
@@ -1,12 +1,3 @@
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.pyc
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-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy/CelFile.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy/CelFile.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy/CelFile.pyo
@@ -46,9 +37,6 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/Generic.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/Generic.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/Generic.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/__init__.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/AlignIO/ClustalIO.py
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%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/AlignIO/ClustalIO.pyo
@@ -73,6 +61,9 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/AlignIO/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/AlignIO/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/AlignIO/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/__init__.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Alphabet/IUPAC.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Alphabet/IUPAC.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Alphabet/IUPAC.pyo
@@ -109,13 +100,13 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/CAPS/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/CAPS/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/CAPS/__init__.pyo
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-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/cluster.so
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Cluster/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Compass/__init__.py
@@ -238,8 +229,8 @@
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%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez/DTDs/mathml2.dtd
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez/DTDs/mathml2-qname-1.mod
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez/DTDs/mathmlsetup.ent
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez/DTDs/mmlalias.ent
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Entrez/DTDs/mmlextra.ent
@@ -301,21 +292,21 @@
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%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/FSSP/fssp_rec.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/FSSP/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/FSSP/__init__.pyc
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%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/File.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/General.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/General.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/General.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/GeneralPoint.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/GeneralPoint.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/GeneralPoint.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/General.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/General.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/General.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GA/Crossover/Point.py
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@@ -367,15 +358,15 @@
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-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.py
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%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Record.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Record.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/Scanner.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/GenBank/__init__.pyc
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@@ -412,18 +403,18 @@
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@@ -457,13 +448,13 @@
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@@ -491,15 +482,15 @@
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@@ -515,12 +506,12 @@
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@@ -694,6 +658,10 @@
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-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsage.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsage.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsageIndices.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsageIndices.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsageIndices.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsage.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsage.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/CodonUsage.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/IsoelectricPoint.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/IsoelectricPoint.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/IsoelectricPoint.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/MeltingTemp.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/MeltingTemp.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/MeltingTemp.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParam.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParam.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParam.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParamData.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParamData.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParamData.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParam.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParam.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/ProtParam.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/lcc.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/lcc.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils/lcc.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Seq.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Seq.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Seq.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Sequencing/Ace.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Sequencing/Ace.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Sequencing/Ace.pyo
@@ -1004,44 +1020,47 @@
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/UniGene/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/UniGene/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/UniGene/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/__init__.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/dnal.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/dnal.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/dnal.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/__init__.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/__init__.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/__init__.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/psw.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/psw.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise/psw.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/bgzf.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/bgzf.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/bgzf.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/__init__.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/__init__.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/__init__.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/cpairwise2.so
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/kNN.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/kNN.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/kNN.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/pairwise2.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/pairwise2.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/pairwise2.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.so
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/_py3k.pyo
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/triefind.py
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/triefind.pyc
%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/triefind.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/BioSeq.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/BioSeq.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/BioSeq.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/BioSeqDatabase.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/BioSeqDatabase.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/BioSeqDatabase.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/DBUtils.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/DBUtils.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/DBUtils.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/Loader.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/Loader.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/Loader.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/__init__.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/__init__.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/trie.so
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/PKG-INFO
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/SOURCES.txt
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/dependency_links.txt
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/native_libs.txt
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/not-zip-safe
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/top_level.txt
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Affy
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align/Applications
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Align
@@ -1099,6 +1118,7 @@
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Restriction/_Update
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Restriction
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SCOP
+ at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SVDSuperimposer
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqIO
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/SeqUtils
@@ -1111,12 +1131,5 @@
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/UniGene
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio/Wise
@dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/Bio
- at dirrm %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/BioSQL
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/SOURCES.txt
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/PKG-INFO
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/dependency_links.txt
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/native_libs.txt
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/not-zip-safe
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/top_level.txt
>Release-Note:
>Audit-Trail:
>Unformatted:
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