ports/148264: math/R: Error: segfault from C stack overflow

[David Wolfskill]

The following reply was made to PR ports/148264; it has been noted by GNATS.

From: David Wolfskill <david at catwhisker.org>
To: FreeBSD-gnats-submit at FreeBSD.org, freebsd-ports-bugs at FreeBSD.org
Cc:  
Subject: Re: ports/148264: math/R: Error: segfault from C stack overflow
Date: Wed, 30 Jun 2010 16:08:03 -0700

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 I believe this update may be of interest.
 
 After applying the following patch:
 
 diff -ru R/Makefile R/Makefile
 --- R/Makefile	2010-05-31 05:31:45.000000000 -0700
 +++ R/Makefile	2010-06-30 15:09:30.000000000 -0700
 @@ -11,8 +11,7 @@
  .else
  PORTNAME=3D	R
  .endif
 -PORTVERSION=3D	2.11.0
 -PORTREVISION=3D	1
 +PORTVERSION=3D	2.11.1
  CATEGORIES=3D	math lang
  MASTER_SITES=3D	http://cran.r-project.org/src/base/R-2/ \
  		ftp://cran.r-project.org/pub/R/src/base/R-2/ \
 diff -ru R/distinfo R/distinfo
 --- R/distinfo	2010-04-27 12:51:30.000000000 -0700
 +++ R/distinfo	2010-06-30 15:12:30.000000000 -0700
 @@ -1,3 +1,3 @@
 -MD5 (R-2.11.0.tar.gz) =3D c6c1e866299f533617750889c729bfb3
 -SHA256 (R-2.11.0.tar.gz) =3D 9b2a1769cdf21ad00500cbc0a1f7e09c872681d2ca0ea=
 592e7692f15ff980a43
 -SIZE (R-2.11.0.tar.gz) =3D 19779908
 +MD5 (R-2.11.1.tar.gz) =3D 7421108ade3e9223263394b9bbe277ce
 +SHA256 (R-2.11.1.tar.gz) =3D 48c1b96426f5b588763652b0b633cadccf410bae34300=
 c22fd40524662bc23bb
 +SIZE (R-2.11.1.tar.gz) =3D 19729300
 
 
 and rebuilding math/R, using the just-built R 2.11.1 did, in fact, avoid
 the "Error: segfault from C stack overflow" condition; I was able to
 create all of the plots without incident.
 
 There may be other issues with 2.11.1, or there may be issues with
 environments other than FreeBSD/i386 stable/7; I have not tested that.
 But the above patch does appear to be sufficient to update the port from
 2.11.0_1 to 2.11.1, and the resulting executable and associated
 libraries appear to work.
 
 Peace,
 david
 --=20
 David H. Wolfskill				david at catwhisker.org
 Depriving a girl or boy of an opportunity for education is evil.
 
 See http://www.catwhisker.org/~david/publickey.gpg for my public key.
 
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