ports/135251: [PATCH]math/R : update to 2.9.0, miscellaneous fixes
bf
bf2006a at yahoo.com
Thu Jun 4 11:00:12 UTC 2009
>Number: 135251
>Category: ports
>Synopsis: [PATCH]math/R : update to 2.9.0, miscellaneous fixes
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: sw-bug
>Submitter-Id: current-users
>Arrival-Date: Thu Jun 04 11:00:11 UTC 2009
>Closed-Date:
>Last-Modified:
>Originator: bf
>Release: 8-CURRENT amd64
>Organization:
-
>Environment:
>Description:
Update to 2.9.0. Add ICU,THREADS options. Sort related options and option
handling. Fix WITHOUT_NLS. Fix plist for WITH_DVI_MANUALS. Partially fix
NOPORTDOCS. Fix build when a threaded Tk is used. Switch to USE_TK. More
cleanup to follow later.
Prodded by: Wen Heping (who also submitted a patch, independently)
>How-To-Repeat:
>Fix:
Patch attached with submission follows:
diff -ruN R.orig/Makefile R/Makefile
--- R.orig/Makefile 2009-01-22 05:56:59.000000000 -0500
+++ R/Makefile 2009-06-04 06:15:05.000000000 -0400
@@ -7,8 +7,7 @@
#
PORTNAME= R
-PORTVERSION= 2.8.1
-PORTREVISION= 1
+PORTVERSION= 2.9.0
CATEGORIES= math lang
MASTER_SITES= http://cran.r-project.org/src/base/R-2/ \
ftp://cran.r-project.org/pub/R/src/base/R-2/ \
@@ -32,17 +31,20 @@
MAINTAINER= bf2006a at yahoo.com
COMMENT= A language for statistical computing and graphics
-OPTIONS= ATLAS "Use ATLAS instead of BLAS/LAPACK" off \
- TCLTK "Use Tcl/Tk (for the tcltk package)" on \
- JPEG "Enable the jpeg() graphics device" on \
- PNG "Enable the png() graphics device" on \
- X11 "Enable the X11() graphics device" on \
- GHOSTSCRIPT "Enable the [dev2]bitmap() graphics devices" on \
- PCRE_PORT "Use PCRE port instead of bundled source" on \
- DVI_MANUALS "Install DVI manuals (requires TeX)" off \
- PDF_MANUALS "Install PDF manuals (requires TeX)" off \
- INFO_MANUALS "Install GNU info manuals" on \
- LETTER_PAPER "Use US Letter paper" off
+OPTIONS= ATLAS "Use ATLAS instead of BLAS/LAPACK" off \
+ GHOSTSCRIPT "Enable the [dev2]bitmap() graphics devices" on \
+ ICU "Improve collation in multibyte locales with ICU" on \
+ JPEG "Enable the jpeg() graphics device" on \
+ LETTER_PAPER "Use US Letter paper" off \
+ NLS "Build with NLS support" on \
+ PCRE_PORT "Use PCRE port instead of bundled source" on \
+ PNG "Enable the png() graphics device" on \
+ TCLTK "Use Tcl/Tk (for the tcltk package)" on \
+ THREADS "Build a multithreaded R" on \
+ X11 "Enable the X11() graphics device" on \
+ DVI_MANUALS "Install DVI manuals (requires TeX)" off \
+ INFO_MANUALS "Install GNU info manuals" on \
+ PDF_MANUALS "Install PDF manuals (requires TeX)" off
MAN1= R.1 Rscript.1
@@ -54,7 +56,6 @@
GNU_CONFIGURE= yes
USE_ICONV= yes
USE_PERL5= yes
-USE_GETTEXT= yes
CONFIGURE_ENV= INSTALL_DATA="${INSTALL} ${COPY} ${_SHROWNGRP} -m 644"
CONFIGURE_ARGS= --enable-R-shlib --with-system-bzlib --with-system-zlib \
@@ -62,14 +63,6 @@
.include <bsd.port.pre.mk>
-.ifndef WITHOUT_NLS
-USE_GETTEXT= yes
-PLIST_SUB+= NLS=""
-.else
-CONFIGURE_ARGS+=--disable-nls
-PLIST_SUB+= NLS="@comment "
-.endif
-
.if defined(WITH_ATLAS)
LIB_DEPENDS+= atlas.2:${PORTSDIR}/math/atlas
CONFIGURE_ARGS+=--with-blas="-lf77blas -latlas"
@@ -83,14 +76,15 @@
CONFIGURE_ARGS+=--with-blas="-lblas" --with-lapack="-llapack -lblas"
.endif
-.if defined(WITHOUT_TCLTK)
-CONFIGURE_ARGS+=--without-tcltk
-PLIST_SUB+= TCLTK="@comment "
+.if !defined(WITHOUT_GHOSTSCRIPT)
+USE_GHOSTSCRIPT_RUN=yes
+.endif
+
+.if defined(WITHOUT_ICU)
+CONFIGURE_ARGS+=--without-ICU
.else
-LIB_DEPENDS+= tcl85:${PORTSDIR}/lang/tcl85 \
- tk85:${PORTSDIR}/x11-toolkits/tk85
-CONFIGURE_ARGS+=--with-tcltk
-PLIST_SUB+= TCLTK=""
+LIB_DEPENDS+= icui18n:${PORTSDIR}/devel/icu
+CONFIGURE_ARGS+=--with-ICU
.endif
.if defined(WITHOUT_JPEG)
@@ -100,6 +94,25 @@
CONFIGURE_ARGS+=--with-jpeglib
.endif
+.if defined(WITH_LETTER_PAPER)
+CONFIGURE_ENV+= R_PAPERSIZE=letter
+.endif
+
+.if !defined(WITHOUT_NLS)
+USE_GETTEXT= yes
+PLIST_SUB+= NLS=""
+.else
+CONFIGURE_ARGS+=--disable-nls
+PLIST_SUB+= NLS="@comment "
+.endif
+
+.if defined(WITHOUT_PCRE_PORT)
+CONFIGURE_ARGS+=--without-system-pcre
+.else
+LIB_DEPENDS+= pcre.0:${PORTSDIR}/devel/pcre
+CONFIGURE_ARGS+=--with-system-pcre
+.endif
+
.if defined(WITHOUT_PNG)
CONFIGURE_ARGS+=--without-libpng
.else
@@ -107,6 +120,22 @@
CONFIGURE_ARGS+=--with-libpng
.endif
+.if defined(WITHOUT_TCLTK)
+CONFIGURE_ARGS+=--without-tcltk
+PLIST_SUB+= TCLTK="@comment "
+.else
+USE_TK = 83+
+.include "${PORTSDIR}/Mk/bsd.tcl.mk"
+CONFIGURE_ARGS+=--with-tcltk
+PLIST_SUB+= TCLTK=""
+.endif
+
+.if defined(WITHOUT_THREADS)
+CONFIGURE_ARGS+=--disable-threads
+.else
+CONFIGURE_ARGS+=--enable-threads=posix
+.endif
+
.if defined(WITHOUT_X11)
CONFIGURE_ARGS+=--without-x
PLIST_SUB+= X11="@comment "
@@ -116,17 +145,6 @@
PLIST_SUB+= X11=""
.endif
-.if !defined(WITHOUT_GHOSTSCRIPT)
-USE_GHOSTSCRIPT_RUN=yes
-.endif
-
-.if defined(WITHOUT_PCRE_PORT)
-CONFIGURE_ARGS+=--without-system-pcre
-.else
-LIB_DEPENDS+= pcre.0:${PORTSDIR}/devel/pcre
-CONFIGURE_ARGS+=--with-system-pcre
-.endif
-
.if defined(WITH_DVI_MANUALS) && !defined(NOPORTDOCS)
BUILD_DEPENDS+= pdflatex:${PORTSDIR}/print/teTeX-base
ALL_TARGET+= dvi
@@ -136,28 +154,32 @@
PLIST_SUB+= DVI_MANUAL="@comment "
.endif
-.if defined(WITHOUT_PDF_MANUALS) && !defined(NOPORTDOCS)
-PLIST_SUB+= PDF_MANUAL="@comment "
-.else
-PLIST_SUB+= PDF_MANUAL=""
-BUILD_DEPENDS+= pdflatex:${PORTSDIR}/print/teTeX-base
-ALL_TARGET+= pdf
-INSTALL_TARGET+= install-pdf
-.endif
-
.if defined(WITH_INFO_MANUALS) && !defined(NOPORTDOCS)
ALL_TARGET+= info
INFO= R-FAQ R-admin R-data R-exts R-intro R-lang
.endif
-.if defined(WITH_LETTER_PAPER)
-CONFIGURE_ENV+= R_PAPERSIZE=letter
+.if defined(WITH_PDF_MANUALS) && !defined(NOPORTDOCS)
+PLIST_SUB+= PDF_MANUAL=""
+BUILD_DEPENDS+= pdflatex:${PORTSDIR}/print/teTeX-base
+ALL_TARGET+= pdf
+INSTALL_TARGET+= install-pdf
+.else
+PLIST_SUB+= PDF_MANUAL="@comment "
.endif
post-patch:
@${REINPLACE_CMD} -e 's|(libdir)/pkgconfig|(prefix)/libdata/pkgconfig|g' \
${WRKSRC}/src/nmath/standalone/Makefile.in \
${WRKSRC}/src/unix/Makefile.in
+ @${REINPLACE_CMD} -e "s|-lpthread|${PTHREAD_LIBS}|g" ${WRKSRC}/configure
+.if defined(WITHOUT_NLS)
+ (cd ${WRKSRC}/src/library/Recommended; \
+ for tarfile in *.tgz *.tar.gz ; do \
+ ${TAR} -czf temptgz --exclude='*/po/*' @$$tarfile ; \
+ ${MV} temptgz $$tarfile ; \
+ done)
+.endif
regression-test: build
@(cd ${WRKSRC}; ${MAKE} check)
diff -ruN R.orig/distinfo R/distinfo
--- R.orig/distinfo 2009-01-07 20:07:42.000000000 -0500
+++ R/distinfo 2009-06-04 06:15:05.000000000 -0400
@@ -1,3 +1,3 @@
-MD5 (R-2.8.1.tar.gz) = acd40621b8942a2464daa2f9cef3273d
-SHA256 (R-2.8.1.tar.gz) = ab488af73ce7a4f2057afcf0e725be96c9ae37f8721143004397b91928ecfa60
-SIZE (R-2.8.1.tar.gz) = 16585380
+MD5 (R-2.9.0.tar.gz) = a5b79a2bc1372136cda4674b5f46d146
+SHA256 (R-2.9.0.tar.gz) = f2de4b710feabf0395ee3503befc69332b78ed6b159e959e93bc086a1a8ad818
+SIZE (R-2.9.0.tar.gz) = 18423754
diff -ruN R.orig/files/patch-configure R/files/patch-configure
--- R.orig/files/patch-configure 1969-12-31 19:00:00.000000000 -0500
+++ R/files/patch-configure 2009-06-04 06:15:05.000000000 -0400
@@ -0,0 +1,12 @@
+#extra linker flags for threaded tk
+--- configure.orig 2009-06-03 19:08:21.000000000 -0400
++++ configure 2009-06-03 19:48:48.000000000 -0400
+@@ -43400,7 +43400,7 @@
+ ## Part 2. Try finding the tk library.
+ if test -n "${TK_CONFIG}"; then
+ . ${TK_CONFIG}
+- TCLTK_LIBS="${TCLTK_LIBS} ${TK_LIB_SPEC} ${TK_XLIBSW}"
++ TCLTK_LIBS="${TCLTK_LIBS} ${TK_LIB_SPEC} ${TK_XLIBSW} ${TCL_LD_FLAGS}"
+ else
+
+ { echo "$as_me:$LINENO: checking for Tk_Init in -ltk" >&5
diff -ruN R.orig/pkg-plist R/pkg-plist
--- R.orig/pkg-plist 2008-12-14 20:05:52.000000000 -0500
+++ R/pkg-plist 2009-06-04 06:15:05.000000000 -0400
@@ -29,6 +29,7 @@
lib/R/bin/libtool
lib/R/bin/mkinstalldirs
lib/R/bin/pager
+lib/R/bin/rtags
lib/R/etc/Makeconf
lib/R/etc/Renviron
lib/R/etc/ldpaths
@@ -710,6 +711,443 @@
lib/R/library/MASS/scripts/ch14.R
lib/R/library/MASS/scripts/ch15.R
lib/R/library/MASS/scripts/ch16.R
+lib/R/library/Matrix/CONTENTS
+lib/R/library/Matrix/Copyrights
+lib/R/library/Matrix/DESCRIPTION
+lib/R/library/Matrix/Doxyfile
+lib/R/library/Matrix/INDEX
+lib/R/library/Matrix/Meta/Rd.rds
+lib/R/library/Matrix/Meta/data.rds
+lib/R/library/Matrix/Meta/hsearch.rds
+lib/R/library/Matrix/Meta/nsInfo.rds
+lib/R/library/Matrix/Meta/package.rds
+lib/R/library/Matrix/Meta/vignette.rds
+lib/R/library/Matrix/NAMESPACE
+lib/R/library/Matrix/R-ex/BunchKaufman-methods.R
+lib/R/library/Matrix/R-ex/CAex.R
+lib/R/library/Matrix/R-ex/CHMfactor-class.R
+lib/R/library/Matrix/R-ex/Cholesky-class.R
+lib/R/library/Matrix/R-ex/Cholesky.R
+lib/R/library/Matrix/R-ex/CsparseMatrix-class.R
+lib/R/library/Matrix/R-ex/Diagonal.R
+lib/R/library/Matrix/R-ex/Hilbert.R
+lib/R/library/Matrix/R-ex/KNex.R
+lib/R/library/Matrix/R-ex/LU-class.R
+lib/R/library/Matrix/R-ex/Matrix-class.R
+lib/R/library/Matrix/R-ex/Matrix.R
+lib/R/library/Matrix/R-ex/MatrixFactorization-class.R
+lib/R/library/Matrix/R-ex/RsparseMatrix-class.R
+lib/R/library/Matrix/R-ex/Schur-class.R
+lib/R/library/Matrix/R-ex/Schur.R
+lib/R/library/Matrix/R-ex/Subassign-methods.R
+lib/R/library/Matrix/R-ex/TsparseMatrix-class.R
+lib/R/library/Matrix/R-ex/USCounties.R
+lib/R/library/Matrix/R-ex/Xtrct-methods.R
+lib/R/library/Matrix/R-ex/all-methods.R
+lib/R/library/Matrix/R-ex/all.equal-methods.R
+lib/R/library/Matrix/R-ex/atomicVector-class.R
+lib/R/library/Matrix/R-ex/band.R
+lib/R/library/Matrix/R-ex/bandSparse.R
+lib/R/library/Matrix/R-ex/bdiag.R
+lib/R/library/Matrix/R-ex/cBind.R
+lib/R/library/Matrix/R-ex/chol.R
+lib/R/library/Matrix/R-ex/colSums.R
+lib/R/library/Matrix/R-ex/dMatrix-class.R
+lib/R/library/Matrix/R-ex/ddenseMatrix-class.R
+lib/R/library/Matrix/R-ex/ddiMatrix-class.R
+lib/R/library/Matrix/R-ex/denseMatrix-class.R
+lib/R/library/Matrix/R-ex/dgCMatrix-class.R
+lib/R/library/Matrix/R-ex/dgTMatrix-class.R
+lib/R/library/Matrix/R-ex/diagonalMatrix-class.R
+lib/R/library/Matrix/R-ex/dpoMatrix-class.R
+lib/R/library/Matrix/R-ex/drop0.R
+lib/R/library/Matrix/R-ex/dsCMatrix-class.R
+lib/R/library/Matrix/R-ex/dsRMatrix-class.R
+lib/R/library/Matrix/R-ex/dsparseMatrix-class.R
+lib/R/library/Matrix/R-ex/dsyMatrix-class.R
+lib/R/library/Matrix/R-ex/dtCMatrix-class.R
+lib/R/library/Matrix/R-ex/dtRMatrix-class-def.R
+lib/R/library/Matrix/R-ex/dtpMatrix-class.R
+lib/R/library/Matrix/R-ex/dtrMatrix-class.R
+lib/R/library/Matrix/R-ex/expand.R
+lib/R/library/Matrix/R-ex/expm.R
+lib/R/library/Matrix/R-ex/externalFormats.R
+lib/R/library/Matrix/R-ex/facmul.R
+lib/R/library/Matrix/R-ex/forceSymmetric.R
+lib/R/library/Matrix/R-ex/image-methods.R
+lib/R/library/Matrix/R-ex/index-class.R
+lib/R/library/Matrix/R-ex/is.na-methods.R
+lib/R/library/Matrix/R-ex/kronecker-methods.R
+lib/R/library/Matrix/R-ex/ldenseMatrix-class.R
+lib/R/library/Matrix/R-ex/ldiMatrix-class.R
+lib/R/library/Matrix/R-ex/lgeMatrix-class.R
+lib/R/library/Matrix/R-ex/lsparseMatrix-classes.R
+lib/R/library/Matrix/R-ex/lsyMatrix-class.R
+lib/R/library/Matrix/R-ex/ltrMatrix-class.R
+lib/R/library/Matrix/R-ex/lu.R
+lib/R/library/Matrix/R-ex/nMatrix-class.R
+lib/R/library/Matrix/R-ex/ndenseMatrix-class.R
+lib/R/library/Matrix/R-ex/nearPD.R
+lib/R/library/Matrix/R-ex/ngeMatrix-class.R
+lib/R/library/Matrix/R-ex/nnzero.R
+lib/R/library/Matrix/R-ex/norm.R
+lib/R/library/Matrix/R-ex/nsparseMatrix-classes.R
+lib/R/library/Matrix/R-ex/nsyMatrix-class.R
+lib/R/library/Matrix/R-ex/ntrMatrix-class.R
+lib/R/library/Matrix/R-ex/number-class.R
+lib/R/library/Matrix/R-ex/pMatrix-class.R
+lib/R/library/Matrix/R-ex/printSpMatrix.R
+lib/R/library/Matrix/R-ex/rcond.R
+lib/R/library/Matrix/R-ex/replValue-class.R
+lib/R/library/Matrix/R-ex/spMatrix.R
+lib/R/library/Matrix/R-ex/sparseLU-class.R
+lib/R/library/Matrix/R-ex/sparseMatrix-class.R
+lib/R/library/Matrix/R-ex/sparseMatrix.R
+lib/R/library/Matrix/R-ex/sparseQR-class.R
+lib/R/library/Matrix/R-ex/sparseVector-class.R
+lib/R/library/Matrix/R-ex/symmetricMatrix-class.R
+lib/R/library/Matrix/R-ex/symmpart.R
+lib/R/library/Matrix/R-ex/tcrossprod.R
+lib/R/library/Matrix/R-ex/triangularMatrix-class.R
+lib/R/library/Matrix/R-ex/unpack.R
+lib/R/library/Matrix/R-ex/unused-classes.R
+lib/R/library/Matrix/R-ex/xtabs.R
+lib/R/library/Matrix/R/Matrix
+lib/R/library/Matrix/R/Matrix.rdb
+lib/R/library/Matrix/R/Matrix.rdx
+lib/R/library/Matrix/data/CAex.R
+lib/R/library/Matrix/data/KNex.R
+lib/R/library/Matrix/data/USCounties.R
+lib/R/library/Matrix/doc/Announce.txt
+lib/R/library/Matrix/doc/Comparisons.R
+lib/R/library/Matrix/doc/Comparisons.Rnw
+lib/R/library/Matrix/doc/Comparisons.pdf
+lib/R/library/Matrix/doc/DSC2009_abstract.txt
+lib/R/library/Matrix/doc/Design-issues.R
+lib/R/library/Matrix/doc/Design-issues.Rnw
+lib/R/library/Matrix/doc/Design-issues.pdf
+lib/R/library/Matrix/doc/Intro2Matrix.R
+lib/R/library/Matrix/doc/Intro2Matrix.Rnw
+lib/R/library/Matrix/doc/Intro2Matrix.pdf
+lib/R/library/Matrix/doc/Introduction.R
+lib/R/library/Matrix/doc/Introduction.Rnw
+lib/R/library/Matrix/doc/Introduction.pdf
+lib/R/library/Matrix/doc/Matrix.bib
+lib/R/library/Matrix/doc/UFsparse/AMD.txt
+lib/R/library/Matrix/doc/UFsparse/CHOLMOD.txt
+lib/R/library/Matrix/doc/UFsparse/COLAMD.txt
+lib/R/library/Matrix/doc/UFsparse/SPQR.txt
+lib/R/library/Matrix/doc/UFsparse/UFconfig.txt
+lib/R/library/Matrix/doc/UFsparse/UserGuides.txt
+lib/R/library/Matrix/doc/index.html
+lib/R/library/Matrix/doc/myVignette.sty
+lib/R/library/Matrix/doc/sparseModels.R
+lib/R/library/Matrix/doc/sparseModels.Rnw
+lib/R/library/Matrix/doc/sparseModels.pdf
+lib/R/library/Matrix/external/CAex_slots.rda
+lib/R/library/Matrix/external/KNex_slots.rda
+lib/R/library/Matrix/external/USCounties_slots.rda
+lib/R/library/Matrix/external/lund_a.mtx
+lib/R/library/Matrix/external/lund_a.rsa
+lib/R/library/Matrix/external/pores_1.mtx
+lib/R/library/Matrix/external/test3comp.rda
+lib/R/library/Matrix/external/utm300.rua
+lib/R/library/Matrix/help/AnIndex
+lib/R/library/Matrix/help/BunchKaufman-methods
+lib/R/library/Matrix/help/CAex
+lib/R/library/Matrix/help/CHMfactor-class
+lib/R/library/Matrix/help/Cholesky
+lib/R/library/Matrix/help/Cholesky-class
+lib/R/library/Matrix/help/CsparseMatrix-class
+lib/R/library/Matrix/help/Diagonal
+lib/R/library/Matrix/help/Hilbert
+lib/R/library/Matrix/help/KNex
+lib/R/library/Matrix/help/LU-class
+lib/R/library/Matrix/help/Matrix
+lib/R/library/Matrix/help/Matrix-class
+lib/R/library/Matrix/help/MatrixFactorization-class
+lib/R/library/Matrix/help/RsparseMatrix-class
+lib/R/library/Matrix/help/Schur
+lib/R/library/Matrix/help/Schur-class
+lib/R/library/Matrix/help/SparseM-conv
+lib/R/library/Matrix/help/Subassign-methods
+lib/R/library/Matrix/help/TsparseMatrix-class
+lib/R/library/Matrix/help/USCounties
+lib/R/library/Matrix/help/Xtrct-methods
+lib/R/library/Matrix/help/all-methods
+lib/R/library/Matrix/help/all.equal-methods
+lib/R/library/Matrix/help/atomicVector-class
+lib/R/library/Matrix/help/band
+lib/R/library/Matrix/help/bandSparse
+lib/R/library/Matrix/help/bdiag
+lib/R/library/Matrix/help/cBind
+lib/R/library/Matrix/help/chol
+lib/R/library/Matrix/help/colSums
+lib/R/library/Matrix/help/compMatrix-class
+lib/R/library/Matrix/help/dMatrix-class
+lib/R/library/Matrix/help/ddenseMatrix-class
+lib/R/library/Matrix/help/ddiMatrix-class
+lib/R/library/Matrix/help/denseMatrix-class
+lib/R/library/Matrix/help/dgCMatrix-class
+lib/R/library/Matrix/help/dgRMatrix-class
+lib/R/library/Matrix/help/dgTMatrix-class
+lib/R/library/Matrix/help/dgeMatrix-class
+lib/R/library/Matrix/help/diagonalMatrix-class
+lib/R/library/Matrix/help/dpoMatrix-class
+lib/R/library/Matrix/help/drop0
+lib/R/library/Matrix/help/dsCMatrix-class
+lib/R/library/Matrix/help/dsRMatrix-class
+lib/R/library/Matrix/help/dsparseMatrix-class
+lib/R/library/Matrix/help/dsyMatrix-class
+lib/R/library/Matrix/help/dtCMatrix-class
+lib/R/library/Matrix/help/dtRMatrix-class-def
+lib/R/library/Matrix/help/dtpMatrix-class
+lib/R/library/Matrix/help/dtrMatrix-class
+lib/R/library/Matrix/help/expand
+lib/R/library/Matrix/help/expm
+lib/R/library/Matrix/help/externalFormats
+lib/R/library/Matrix/help/facmul
+lib/R/library/Matrix/help/forceSymmetric
+lib/R/library/Matrix/help/generalMatrix-class
+lib/R/library/Matrix/help/image-methods
+lib/R/library/Matrix/help/index-class
+lib/R/library/Matrix/help/is.na-methods
+lib/R/library/Matrix/help/isSymmetric-methods
+lib/R/library/Matrix/help/kronecker-methods
+lib/R/library/Matrix/help/ldenseMatrix-class
+lib/R/library/Matrix/help/ldiMatrix-class
+lib/R/library/Matrix/help/lgeMatrix-class
+lib/R/library/Matrix/help/lsparseMatrix-classes
+lib/R/library/Matrix/help/lsyMatrix-class
+lib/R/library/Matrix/help/ltrMatrix-class
+lib/R/library/Matrix/help/lu
+lib/R/library/Matrix/help/nMatrix-class
+lib/R/library/Matrix/help/ndenseMatrix-class
+lib/R/library/Matrix/help/nearPD
+lib/R/library/Matrix/help/ngeMatrix-class
+lib/R/library/Matrix/help/nnzero
+lib/R/library/Matrix/help/norm
+lib/R/library/Matrix/help/nsparseMatrix-classes
+lib/R/library/Matrix/help/nsyMatrix-class
+lib/R/library/Matrix/help/ntrMatrix-class
+lib/R/library/Matrix/help/number-class
+lib/R/library/Matrix/help/pMatrix-class
+lib/R/library/Matrix/help/printSpMatrix
+lib/R/library/Matrix/help/qr-methods
+lib/R/library/Matrix/help/rcond
+lib/R/library/Matrix/help/replValue-class
+lib/R/library/Matrix/help/spMatrix
+lib/R/library/Matrix/help/sparseLU-class
+lib/R/library/Matrix/help/sparseMatrix
+lib/R/library/Matrix/help/sparseMatrix-class
+lib/R/library/Matrix/help/sparseQR-class
+lib/R/library/Matrix/help/sparseVector-class
+lib/R/library/Matrix/help/symmetricMatrix-class
+lib/R/library/Matrix/help/symmpart
+lib/R/library/Matrix/help/tcrossprod
+lib/R/library/Matrix/help/triangularMatrix-class
+lib/R/library/Matrix/help/unpack
+lib/R/library/Matrix/help/unused-classes
+lib/R/library/Matrix/help/xtabs
+lib/R/library/Matrix/html/00Index.html
+lib/R/library/Matrix/html/BunchKaufman-methods.html
+lib/R/library/Matrix/html/CAex.html
+lib/R/library/Matrix/html/CHMfactor-class.html
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lib/R/library/grid/R-ex/grid.show.viewport.R
lib/R/library/grid/R-ex/grid.text.R
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lib/R/library/grid/help/grid.rect
lib/R/library/grid/help/grid.refresh
lib/R/library/grid/help/grid.remove
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lib/R/library/grid/help/grid.segments
lib/R/library/grid/help/grid.set
lib/R/library/grid/help/grid.show.layout
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lib/R/library/grid/help/unit.length
lib/R/library/grid/help/unit.pmin
lib/R/library/grid/help/unit.rep
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lib/R/library/grid/help/validDetails
lib/R/library/grid/help/viewport
lib/R/library/grid/help/viewports
@@ -4181,6 +4640,7 @@
lib/R/library/grid/html/grid.rect.html
lib/R/library/grid/html/grid.refresh.html
lib/R/library/grid/html/grid.remove.html
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lib/R/library/grid/html/grid.segments.html
lib/R/library/grid/html/grid.set.html
lib/R/library/grid/html/grid.show.layout.html
@@ -4201,6 +4661,7 @@
lib/R/library/grid/html/unit.length.html
lib/R/library/grid/html/unit.pmin.html
lib/R/library/grid/html/unit.rep.html
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lib/R/library/grid/html/validDetails.html
lib/R/library/grid/html/viewport.html
lib/R/library/grid/html/viewports.html
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lib/R/library/grid/latex/grid.rect.tex
lib/R/library/grid/latex/grid.refresh.tex
lib/R/library/grid/latex/grid.remove.tex
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lib/R/library/grid/latex/grid.segments.tex
lib/R/library/grid/latex/grid.set.tex
lib/R/library/grid/latex/grid.show.layout.tex
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lib/R/library/grid/latex/unit.pmin.tex
lib/R/library/grid/latex/unit.rep.tex
lib/R/library/grid/latex/unit.tex
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lib/R/library/grid/latex/validDetails.tex
lib/R/library/grid/latex/viewport.tex
lib/R/library/grid/latex/viewports.tex
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lib/R/library/lattice/R-ex/packet.panel.default.R
lib/R/library/lattice/R-ex/panel.bwplot.R
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lib/R/library/lattice/R-ex/panel.violin.R
lib/R/library/lattice/R-ex/panel.xyplot.R
lib/R/library/lattice/R-ex/print.trellis.R
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lib/R/library/lattice/help/panel.parallel
lib/R/library/lattice/help/panel.qqmath
lib/R/library/lattice/help/panel.qqmathline
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lib/R/library/lattice/help/panel.stripplot
lib/R/library/lattice/help/panel.superpose
lib/R/library/lattice/help/panel.violin
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lib/R/library/lattice/html/panel.parallel.html
lib/R/library/lattice/html/panel.qqmath.html
lib/R/library/lattice/html/panel.qqmathline.html
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lib/R/library/lattice/html/panel.stripplot.html
lib/R/library/lattice/html/panel.superpose.html
lib/R/library/lattice/html/panel.violin.html
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lib/R/library/lattice/latex/panel.parallel.tex
lib/R/library/lattice/latex/panel.qqmath.tex
lib/R/library/lattice/latex/panel.qqmathline.tex
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lib/R/library/lattice/latex/panel.stripplot.tex
lib/R/library/lattice/latex/panel.superpose.tex
lib/R/library/lattice/latex/panel.violin.tex
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lib/R/library/methods/NAMESPACE
lib/R/library/methods/R-ex/GenericFunctions.R
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lib/R/library/methods/R-ex/NextMethod.R
lib/R/library/methods/R-ex/RClassUtils.R
lib/R/library/methods/R-ex/RMethodUtils.R
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lib/R/library/methods/R-ex/callGeneric.R
lib/R/library/methods/R-ex/canCoerce.R
lib/R/library/methods/R-ex/cbind2.R
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lib/R/library/methods/R-ex/dotsMethods.R
lib/R/library/methods/R-ex/findMethods.R
lib/R/library/methods/R-ex/getClass.R
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lib/R/library/methods/R-ex/method.skeleton.R
lib/R/library/methods/R-ex/new.R
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lib/R/library/methods/R-ex/promptClass.R
lib/R/library/methods/R-ex/representation.R
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lib/R/library/methods/R-ex/setClass.R
lib/R/library/methods/R-ex/setClassUnion.R
lib/R/library/methods/R-ex/setGeneric.R
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lib/R/library/methods/R-ex/showMethods.R
lib/R/library/methods/R-ex/slot.R
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lib/R/library/methods/R-ex/validObject.R
lib/R/library/methods/R/methods
lib/R/library/methods/R/methods.rdb
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lib/R/library/methods/help/canCoerce
lib/R/library/methods/help/cbind2
lib/R/library/methods/help/classRepresentation-class
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lib/R/library/methods/help/dotsMethods
lib/R/library/methods/help/findClass
lib/R/library/methods/help/findMethods
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lib/R/library/methods/help/methods-package
lib/R/library/methods/help/new
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lib/R/library/methods/help/promptClass
lib/R/library/methods/help/promptMethods
lib/R/library/methods/help/representation
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lib/R/library/methods/help/setClass
lib/R/library/methods/help/setClassUnion
lib/R/library/methods/help/setGeneric
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lib/R/library/methods/help/slot
lib/R/library/methods/help/substituteDirect
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lib/R/library/methods/help/validObject
lib/R/library/methods/help/zBasicFunsList
lib/R/library/methods/html/00Index.html
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lib/R/library/methods/html/cbind2.html
lib/R/library/methods/html/classRepresentation-class.html
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lib/R/library/methods/html/dotsMethods.html
lib/R/library/methods/html/findClass.html
lib/R/library/methods/html/findMethods.html
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lib/R/library/methods/html/methods-package.html
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lib/R/library/methods/html/promptClass.html
lib/R/library/methods/html/promptMethods.html
lib/R/library/methods/html/representation.html
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lib/R/library/methods/html/setClass.html
lib/R/library/methods/html/setClassUnion.html
lib/R/library/methods/html/setGeneric.html
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lib/R/library/methods/html/slot.html
lib/R/library/methods/html/substituteDirect.html
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lib/R/library/methods/html/validObject.html
lib/R/library/methods/html/zBasicFunsList.html
lib/R/library/methods/latex/BasicClasses.tex
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lib/R/library/methods/latex/cbind2.tex
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lib/R/library/methods/latex/dotsMethods.tex
lib/R/library/methods/latex/findClass.tex
lib/R/library/methods/latex/findMethods.tex
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lib/R/library/methods/latex/methods-package.tex
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lib/R/library/methods/latex/promptClass.tex
lib/R/library/methods/latex/promptMethods.tex
lib/R/library/methods/latex/representation.tex
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lib/R/library/methods/latex/setClass.tex
lib/R/library/methods/latex/setClassUnion.tex
lib/R/library/methods/latex/setGeneric.tex
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lib/R/library/methods/latex/slot.tex
lib/R/library/methods/latex/substituteDirect.tex
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lib/R/library/methods/latex/validObject.tex
lib/R/library/methods/latex/zBasicFunsList.tex
lib/R/library/methods/libs/methods.so
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lib/R/library/mgcv/NAMESPACE
lib/R/library/mgcv/R-ex/Predict.matrix.R
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lib/R/library/mgcv/R-ex/anova.gam.R
lib/R/library/mgcv/R-ex/cSplineDes.R
lib/R/library/mgcv/R-ex/choose.k.R
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lib/R/library/mgcv/R/mgcv
lib/R/library/mgcv/R/mgcv.rdb
lib/R/library/mgcv/R/mgcv.rdx
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lib/R/library/mgcv/help/AnIndex
lib/R/library/mgcv/help/Predict.matrix
lib/R/library/mgcv/help/anova.gam
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lib/R/library/mgcv/help/gam.convergence
lib/R/library/mgcv/help/gam.fit
lib/R/library/mgcv/help/gam.fit3
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lib/R/library/mgcv/help/gam.outer
lib/R/library/mgcv/help/gam.selection
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lib/R/library/mgcv/help/gam.side
lib/R/library/mgcv/help/gam2objective
lib/R/library/mgcv/help/gamObject
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lib/R/library/mgcv/help/gamm
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lib/R/library/mgcv/help/get.var
lib/R/library/mgcv/help/influence.gam
lib/R/library/mgcv/help/initial.sp
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lib/R/library/mgcv/help/uniquecombs
lib/R/library/mgcv/help/vcov.gam
lib/R/library/mgcv/help/vis.gam
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lib/R/library/mgcv/html/00Index.html
lib/R/library/mgcv/html/Predict.matrix.html
lib/R/library/mgcv/html/anova.gam.html
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lib/R/library/mgcv/html/gam.fit3.html
lib/R/library/mgcv/html/gam.html
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lib/R/library/mgcv/html/get.var.html
lib/R/library/mgcv/html/influence.gam.html
lib/R/library/mgcv/html/initial.sp.html
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lib/R/library/mgcv/html/vcov.gam.html
lib/R/library/mgcv/html/vis.gam.html
lib/R/library/mgcv/latex/Predict.matrix.tex
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lib/R/library/mgcv/latex/anova.gam.tex
lib/R/library/mgcv/latex/cSplineDes.tex
lib/R/library/mgcv/latex/choose.k.tex
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lib/R/library/mgcv/latex/gam.fit.tex
lib/R/library/mgcv/latex/gam.fit3.tex
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lib/R/library/mgcv/latex/gam.models.tex
lib/R/library/mgcv/latex/gam.outer.tex
lib/R/library/mgcv/latex/gam.selection.tex
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lib/R/library/mgcv/latex/gam.side.tex
lib/R/library/mgcv/latex/gam.tex
lib/R/library/mgcv/latex/gam2objective.tex
lib/R/library/mgcv/latex/gamObject.tex
lib/R/library/mgcv/latex/gamSim.tex
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lib/R/library/mgcv/latex/gamm.tex
lib/R/library/mgcv/latex/get.var.tex
lib/R/library/mgcv/latex/influence.gam.tex
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lib/R/library/nnet/latex/which.is.max.tex
lib/R/library/nnet/libs/nnet.so
lib/R/library/nnet/man/nnet.Rd.gz
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lib/R/library/rpart/CONTENTS
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lib/R/library/stats/R-ex/plot.profile.nls.R
lib/R/library/stats/R-ex/plot.stepfun.R
lib/R/library/stats/R-ex/plot.ts.R
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lib/R/library/stats/R-ex/poly.R
lib/R/library/stats/R-ex/power.R
lib/R/library/stats/R-ex/power.anova.test.R
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lib/R/library/stats/help/plot.stepfun
lib/R/library/stats/help/plot.ts
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lib/R/library/stats/help/poly
lib/R/library/stats/help/power
lib/R/library/stats/help/power.anova.test
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lib/R/library/stats/html/plot.spec.html
lib/R/library/stats/html/plot.stepfun.html
lib/R/library/stats/html/plot.ts.html
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lib/R/library/stats/html/poly.html
lib/R/library/stats/html/power.anova.test.html
lib/R/library/stats/html/power.html
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lib/R/library/stats/latex/plot.spec.tex
lib/R/library/stats/latex/plot.stepfun.tex
lib/R/library/stats/latex/plot.ts.tex
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lib/R/library/stats/latex/poly.tex
lib/R/library/stats/latex/power.anova.test.tex
lib/R/library/stats/latex/power.prop.test.tex
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lib/R/library/survival/Meta/package.rds
lib/R/library/survival/NAMESPACE
lib/R/library/survival/R-ex/Surv.R
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lib/R/library/survival/R-ex/anova.coxph.R
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lib/R/library/survival/R-ex/attrassign.R
lib/R/library/survival/R-ex/cch.R
lib/R/library/survival/R-ex/clogit.R
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lib/R/library/survival/R-ex/coxph.R
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lib/R/library/survival/R-ex/frailty.R
lib/R/library/survival/R-ex/is.ratetable.R
lib/R/library/survival/R-ex/kidney.R
lib/R/library/survival/R-ex/lines.survfit.R
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lib/R/library/survival/R-ex/nwtco.R
lib/R/library/survival/R-ex/plot.cox.zph.R
lib/R/library/survival/R-ex/plot.survfit.R
lib/R/library/survival/R-ex/predict.coxph.R
lib/R/library/survival/R-ex/predict.survreg.R
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lib/R/library/survival/R-ex/pspline.R
lib/R/library/survival/R-ex/pyears.R
lib/R/library/survival/R-ex/ratetable.R
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lib/R/library/survival/R-ex/residuals.survreg.R
lib/R/library/survival/R-ex/ridge.R
lib/R/library/survival/R-ex/strata.R
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lib/R/library/survival/R-ex/summary.survfit.R
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lib/R/library/survival/R-ex/survSplit.R
lib/R/library/survival/R-ex/survdiff.R
lib/R/library/survival/R-ex/survexp.R
lib/R/library/survival/R-ex/survexp.us.R
lib/R/library/survival/R-ex/survfit.R
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lib/R/library/survival/R-ex/survobrien.R
lib/R/library/survival/R-ex/survreg.R
lib/R/library/survival/R-ex/survreg.distributions.R
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lib/R/library/survival/R-ex/tcut.R
lib/R/library/survival/R-ex/tobin.R
lib/R/library/survival/R-ex/untangle.specials.R
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lib/R/library/survival/data/Rdata.rdb
lib/R/library/survival/data/Rdata.rds
lib/R/library/survival/data/Rdata.rdx
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lib/R/library/survival/help/AnIndex
lib/R/library/survival/help/Surv
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lib/R/library/survival/help/aml
lib/R/library/survival/help/anova.coxph
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lib/R/library/survival/help/attrassign
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lib/R/library/survival/help/bladder
lib/R/library/survival/help/cch
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lib/R/library/survival/help/clogit
lib/R/library/survival/help/cluster
lib/R/library/survival/help/colon
lib/R/library/survival/help/cox.zph
lib/R/library/survival/help/coxph
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lib/R/library/survival/help/coxph.detail
lib/R/library/survival/help/coxph.object
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lib/R/library/survival/help/frailty
lib/R/library/survival/help/heart
lib/R/library/survival/help/is.ratetable
lib/R/library/survival/help/kidney
lib/R/library/survival/help/lines.survfit
lib/R/library/survival/help/lung
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lib/R/library/survival/help/nwtco
lib/R/library/survival/help/ovarian
lib/R/library/survival/help/pbc
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lib/R/library/survival/help/plot.cox.zph
lib/R/library/survival/help/plot.survfit
lib/R/library/survival/help/predict.coxph
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lib/R/library/survival/help/print.survfit
lib/R/library/survival/help/pspline
lib/R/library/survival/help/pyears
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lib/R/library/survival/help/ridge
lib/R/library/survival/help/stanford2
lib/R/library/survival/help/strata
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lib/R/library/survival/help/summary.survfit
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lib/R/library/survival/help/survSplit
lib/R/library/survival/help/survdiff
lib/R/library/survival/help/survexp
lib/R/library/survival/help/survexp.fit
lib/R/library/survival/help/survexp.us
lib/R/library/survival/help/survfit
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lib/R/library/survival/help/survfit.object
lib/R/library/survival/help/survival-internal
lib/R/library/survival/help/survobrien
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lib/R/library/survival/help/survreg.distributions
lib/R/library/survival/help/survreg.object
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lib/R/library/survival/help/tcut
lib/R/library/survival/help/tobin
lib/R/library/survival/help/untangle.specials
lib/R/library/survival/help/veteran
lib/R/library/survival/html/00Index.html
lib/R/library/survival/html/Surv.html
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lib/R/library/survival/html/aml.html
lib/R/library/survival/html/anova.coxph.html
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lib/R/library/survival/html/attrassign.html
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lib/R/library/survival/html/bladder.html
lib/R/library/survival/html/cch.html
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lib/R/library/survival/html/clogit.html
lib/R/library/survival/html/cluster.html
lib/R/library/survival/html/colon.html
lib/R/library/survival/html/cox.zph.html
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lib/R/library/survival/html/coxph.detail.html
lib/R/library/survival/html/coxph.html
lib/R/library/survival/html/coxph.object.html
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lib/R/library/survival/html/frailty.html
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lib/R/library/survival/html/is.ratetable.html
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lib/R/library/survival/html/lines.survfit.html
lib/R/library/survival/html/lung.html
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lib/R/library/survival/html/nwtco.html
lib/R/library/survival/html/ovarian.html
lib/R/library/survival/html/pbc.html
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lib/R/library/survival/html/plot.cox.zph.html
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lib/R/library/survival/html/pspline.html
lib/R/library/survival/html/pyears.html
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lib/R/library/survival/html/stanford2.html
lib/R/library/survival/html/strata.html
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lib/R/library/survival/html/survexp.html
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lib/R/library/survival/html/survfit.object.html
lib/R/library/survival/html/survival-internal.html
@@ -8033,44 +8565,48 @@
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lib/R/library/survival/html/tcut.html
lib/R/library/survival/html/tobin.html
lib/R/library/survival/html/untangle.specials.html
lib/R/library/survival/html/veteran.html
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lib/R/library/survival/latex/aml.tex
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lib/R/library/survival/latex/attrassign.tex
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lib/R/library/survival/latex/cch.tex
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lib/R/library/survival/latex/cluster.tex
lib/R/library/survival/latex/colon.tex
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lib/R/library/survival/latex/coxph.object.tex
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lib/R/library/survival/latex/heart.tex
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lib/R/library/survival/latex/lines.survfit.tex
lib/R/library/survival/latex/lung.tex
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lib/R/library/survival/latex/nwtco.tex
lib/R/library/survival/latex/ovarian.tex
lib/R/library/survival/latex/pbc.tex
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lib/R/library/survival/latex/plot.survfit.tex
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lib/R/library/survival/latex/predict.survreg.tex
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lib/R/library/survival/latex/print.survfit.tex
lib/R/library/survival/latex/pspline.tex
lib/R/library/survival/latex/pyears.tex
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lib/R/library/survival/latex/stanford2.tex
lib/R/library/survival/latex/strata.tex
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lib/R/library/survival/latex/summary.survfit.tex
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lib/R/library/survival/latex/survexp.fit.tex
lib/R/library/survival/latex/survexp.tex
lib/R/library/survival/latex/survexp.us.tex
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lib/R/library/survival/latex/survfit.object.tex
lib/R/library/survival/latex/survfit.tex
lib/R/library/survival/latex/survival-internal.tex
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lib/R/library/survival/latex/survreg.object.tex
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lib/R/library/survival/latex/survreg.tex
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lib/R/library/survival/latex/tcut.tex
lib/R/library/survival/latex/tobin.tex
lib/R/library/survival/latex/untangle.specials.tex
lib/R/library/survival/latex/veteran.tex
lib/R/library/survival/libs/survival.so
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lib/R/library/tcltk/CONTENTS
lib/R/library/tcltk/DESCRIPTION
lib/R/library/tcltk/INDEX
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lib/R/library/tcltk/R/tcltk
lib/R/library/tcltk/R/tcltk.rdb
lib/R/library/tcltk/R/tcltk.rdx
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lib/R/library/tcltk/help/tkProgressBar
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lib/R/library/tcltk/help/tk_select.list
lib/R/library/tcltk/help/tkpager
lib/R/library/tcltk/html/00Index.html
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lib/R/library/tcltk/html/tkProgressBar.html
lib/R/library/tcltk/html/tkStartGUI.html
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lib/R/library/tcltk/html/tk_select.list.html
lib/R/library/tcltk/html/tkpager.html
lib/R/library/tcltk/latex/TclInterface.tex
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lib/R/library/tcltk/latex/tkStartGUI.tex
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lib/R/library/tcltk/latex/tk_select.list.tex
lib/R/library/tcltk/latex/tkpager.tex
lib/R/library/tcltk/libs/tcltk.so
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lib/R/library/tools/Meta/package.rds
lib/R/library/tools/NAMESPACE
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lib/R/library/tools/R-ex/Rdutils.R
lib/R/library/tools/R-ex/charsets.R
lib/R/library/tools/R-ex/checkFF.R
lib/R/library/tools/R-ex/delimMatch.R
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lib/R/library/tools/R-ex/fileutils.R
lib/R/library/tools/R-ex/getDepList.R
lib/R/library/tools/R-ex/installFoundDepends.R
lib/R/library/tools/R-ex/makeLazyLoading.R
lib/R/library/tools/R-ex/md5sum.R
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lib/R/library/tools/R-ex/readNEWS.R
lib/R/library/tools/R-ex/showNonASCII.R
lib/R/library/tools/R-ex/undoc.R
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lib/R/library/tools/help/QC
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lib/R/library/tools/help/Rdindex
lib/R/library/tools/help/Rdutils
lib/R/library/tools/help/buildVignettes
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lib/R/library/tools/help/codoc
lib/R/library/tools/help/delimMatch
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lib/R/library/tools/help/encoded
lib/R/library/tools/help/fileutils
lib/R/library/tools/help/getDepList
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lib/R/library/tools/help/md5sum
lib/R/library/tools/help/package.dependencies
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lib/R/library/tools/help/read.00Index
lib/R/library/tools/help/readNEWS
lib/R/library/tools/help/showNonASCII
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lib/R/library/tools/help/texi2dvi
lib/R/library/tools/help/tools-defunct
lib/R/library/tools/help/tools-deprecated
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lib/R/library/tools/help/xgettext
lib/R/library/tools/html/00Index.html
lib/R/library/tools/html/QC.html
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lib/R/library/tools/html/Rdindex.html
lib/R/library/tools/html/Rdutils.html
lib/R/library/tools/html/buildVignettes.html
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lib/R/library/tools/html/codoc.html
lib/R/library/tools/html/delimMatch.html
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lib/R/library/tools/html/encoded.html
lib/R/library/tools/html/fileutils.html
lib/R/library/tools/html/getDepList.html
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lib/R/library/tools/html/md5sum.html
lib/R/library/tools/html/package.dependencies.html
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lib/R/library/tools/html/read.00Index.html
lib/R/library/tools/html/readNEWS.html
lib/R/library/tools/html/showNonASCII.html
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lib/R/library/tools/html/texi2dvi.html
lib/R/library/tools/html/tools-defunct.html
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lib/R/library/tools/html/xgettext.html
lib/R/library/tools/latex/QC.tex
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lib/R/library/tools/latex/Rdindex.tex
lib/R/library/tools/latex/Rdutils.tex
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lib/R/library/tools/latex/codoc.tex
lib/R/library/tools/latex/delimMatch.tex
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lib/R/library/tools/latex/encoded.tex
lib/R/library/tools/latex/fileutils.tex
lib/R/library/tools/latex/getDepList.tex
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lib/R/library/tools/latex/makeLazyLoading.tex
lib/R/library/tools/latex/md5sum.tex
lib/R/library/tools/latex/package.dependencies.tex
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lib/R/library/tools/latex/read.00Index.tex
lib/R/library/tools/latex/readNEWS.tex
lib/R/library/tools/latex/showNonASCII.tex
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lib/R/library/tools/latex/texi2dvi.tex
lib/R/library/tools/latex/tools-defunct.tex
lib/R/library/tools/latex/tools-deprecated.tex
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lib/R/library/utils/R-ex/relist.R
lib/R/library/utils/R-ex/roman.R
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lib/R/library/utils/R-ex/savehistory.R
lib/R/library/utils/R-ex/select.list.R
lib/R/library/utils/R-ex/sessionInfo.R
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lib/R/library/utils/R-ex/write.table.R
lib/R/library/utils/R/utils
lib/R/library/utils/R/utils.rdb
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lib/R/library/utils/help/remove.packages
lib/R/library/utils/help/roman
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lib/R/library/utils/help/savehistory
lib/R/library/utils/help/select.list
lib/R/library/utils/help/sessionInfo
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lib/R/library/utils/help/toLatex
lib/R/library/utils/help/txtProgressBar
lib/R/library/utils/help/type.convert
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lib/R/library/utils/help/url.show
lib/R/library/utils/help/utils-defunct
lib/R/library/utils/help/utils-deprecated
lib/R/library/utils/help/utils-package
lib/R/library/utils/help/vignette
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lib/R/library/utils/help/write.table
lib/R/library/utils/help/zip.file.extract
lib/R/library/utils/html/00Index.html
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lib/R/library/utils/html/relist.html
lib/R/library/utils/html/remove.packages.html
lib/R/library/utils/html/roman.html
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lib/R/library/utils/html/savehistory.html
lib/R/library/utils/html/select.list.html
lib/R/library/utils/html/sessionInfo.html
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lib/R/library/utils/html/toLatex.html
lib/R/library/utils/html/txtProgressBar.html
lib/R/library/utils/html/type.convert.html
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lib/R/library/utils/html/update.packages.html
lib/R/library/utils/html/url.show.html
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lib/R/library/utils/html/write.table.html
lib/R/library/utils/html/zip.file.extract.html
lib/R/library/utils/iconvlist
@@ -8718,6 +9288,7 @@
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lib/R/library/utils/latex/remove.packages.tex
lib/R/library/utils/latex/roman.tex
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lib/R/library/utils/latex/select.list.tex
lib/R/library/utils/latex/sessionInfo.tex
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lib/R/library/utils/latex/toLatex.tex
lib/R/library/utils/latex/txtProgressBar.tex
lib/R/library/utils/latex/type.convert.tex
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lib/R/library/utils/latex/update.packages.tex
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lib/R/library/utils/latex/vignette.tex
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lib/R/library/utils/latex/write.table.tex
lib/R/library/utils/latex/zip.file.extract.tex
lib/R/library/utils/man/utils.Rd.gz
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lib/R/%%DATADIR%%/packloader.R
lib/R/share/encodings/Adobe-glyphlist
lib/R/share/encodings/character-sets
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lib/R/share/java/getsp.class
lib/R/share/licenses/AGPL-3
lib/R/share/licenses/Artistic-1.0
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lib/R/share/licenses/LGPL-3
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-lib/R/share/locale/pt_BR/LC_MESSAGES/R.mo
-lib/R/share/locale/ru/LC_MESSAGES/R.mo
-lib/R/share/locale/zh_CN/LC_MESSAGES/R.mo
-lib/R/share/locale/zh_TW/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/de/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/en/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/en at quot/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/en_GB/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/es/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/fr/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/it/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/ja/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/ko/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/pt_BR/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/ru/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/zh_CN/LC_MESSAGES/R.mo
+%%NLS%%lib/R/share/locale/zh_TW/LC_MESSAGES/R.mo
lib/R/share/make/check.mk
+lib/R/share/make/basepkg.mk
+lib/R/share/make/clean.mk
+lib/R/share/make/winshlib.mk
lib/R/share/make/config.mk
lib/R/share/make/shlib.mk
-lib/R/share/make/tests.mk
lib/R/share/make/vars.mk
lib/R/share/perl/File/Copy/Recursive.pm
lib/R/share/perl/R/Dcf.pm
@@ -8793,9 +9371,7 @@
lib/R/share/perl/R/Utils.pm
lib/R/share/perl/R/Vars.pm
lib/R/share/perl/Text/DelimMatch.pm
-lib/R/share/perl/build-help-windows.pl
lib/R/share/perl/build-help.pl
-lib/R/share/perl/massage-Examples.pl
lib/R/share/sh/dcf.sh
lib/R/share/sh/echo.sh
lib/R/share/sh/help-links.sh
@@ -8853,14 +9429,29 @@
%%DOCSDIR%%/manual/R-intro.html
%%DOCSDIR%%/manual/R-ints.html
%%DOCSDIR%%/manual/R-lang.html
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-admin.pdf
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-data.pdf
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-exts.pdf
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-FAQ.pdf
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-intro.pdf
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-ints.pdf
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-lang.pdf
-%%PDF_MANUAL%%%%DOCSDIR%%/manual/refman.pdf
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/images/QQ.eps
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/images/ecdf.eps
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/images/fig11.eps
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/images/fig12.eps
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/images/hist.eps
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/images/ice.eps
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-FAQ.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-admin.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-data.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-exts.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-intro.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-ints.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-lang.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%%%DOCSDIR%%/manual/refman.dvi
+%%PORTDOCS%%%%DVI_MANUAL%%@dirrm %%DOCSDIR%%/manual/images
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-admin.pdf
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-data.pdf
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-exts.pdf
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-FAQ.pdf
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-intro.pdf
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-ints.pdf
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-lang.pdf
+%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/refman.pdf
@dirrm %%DOCSDIR%%/manual
@dirrm %%DOCSDIR%%/html/search
@dirrm %%DOCSDIR%%/html
@@ -8873,33 +9464,33 @@
@dirrm lib/R/share/perl/File
@dirrm lib/R/share/perl
@dirrm lib/R/share/make
- at dirrm lib/R/share/locale/zh_TW/LC_MESSAGES
- at dirrm lib/R/share/locale/zh_TW
- at dirrm lib/R/share/locale/zh_CN/LC_MESSAGES
- at dirrm lib/R/share/locale/zh_CN
- at dirrm lib/R/share/locale/ru/LC_MESSAGES
- at dirrm lib/R/share/locale/ru
- at dirrm lib/R/share/locale/pt_BR/LC_MESSAGES
- at dirrm lib/R/share/locale/pt_BR
- at dirrm lib/R/share/locale/ko/LC_MESSAGES
- at dirrm lib/R/share/locale/ko
- at dirrm lib/R/share/locale/ja/LC_MESSAGES
- at dirrm lib/R/share/locale/ja
- at dirrm lib/R/share/locale/it/LC_MESSAGES
- at dirrm lib/R/share/locale/it
- at dirrm lib/R/share/locale/fr/LC_MESSAGES
- at dirrm lib/R/share/locale/fr
- at dirrm lib/R/share/locale/es/LC_MESSAGES
- at dirrm lib/R/share/locale/es
- at dirrm lib/R/share/locale/en_GB/LC_MESSAGES
- at dirrm lib/R/share/locale/en_GB
- at dirrm lib/R/share/locale/en at quot/LC_MESSAGES
- at dirrm lib/R/share/locale/en at quot
- at dirrm lib/R/share/locale/en/LC_MESSAGES
- at dirrm lib/R/share/locale/en
- at dirrm lib/R/share/locale/de/LC_MESSAGES
- at dirrm lib/R/share/locale/de
- at dirrm lib/R/share/locale
+%%NLS%%@dirrm lib/R/share/locale/zh_TW/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/zh_TW
+%%NLS%%@dirrm lib/R/share/locale/zh_CN/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/zh_CN
+%%NLS%%@dirrm lib/R/share/locale/ru/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/ru
+%%NLS%%@dirrm lib/R/share/locale/pt_BR/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/pt_BR
+%%NLS%%@dirrm lib/R/share/locale/ko/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/ko
+%%NLS%%@dirrm lib/R/share/locale/ja/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/ja
+%%NLS%%@dirrm lib/R/share/locale/it/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/it
+%%NLS%%@dirrm lib/R/share/locale/fr/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/fr
+%%NLS%%@dirrm lib/R/share/locale/es/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/es
+%%NLS%%@dirrm lib/R/share/locale/en_GB/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/en_GB
+%%NLS%%@dirrm lib/R/share/locale/en at quot/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/en at quot
+%%NLS%%@dirrm lib/R/share/locale/en/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/en
+%%NLS%%@dirrm lib/R/share/locale/de/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/de
+%%NLS%%@dirrm lib/R/share/locale
@dirrm lib/R/share/licenses
@dirrm lib/R/share/java
@dirrm lib/R/share/encodings
@@ -9087,15 +9678,15 @@
%%NLS%%@dirrm lib/R/library/spatial/po/en at quot/LC_MESSAGES
%%NLS%%@dirrm lib/R/library/spatial/po/en at quot
%%NLS%%@dirrm lib/R/library/spatial/po
-%%NLS%%@dirrm lib/R/library/spatial/man
-%%NLS%%@dirrm lib/R/library/spatial/libs
-%%NLS%%@dirrm lib/R/library/spatial/latex
-%%NLS%%@dirrm lib/R/library/spatial/html
-%%NLS%%@dirrm lib/R/library/spatial/help
-%%NLS%%@dirrm lib/R/library/spatial/R-ex
-%%NLS%%@dirrm lib/R/library/spatial/R
-%%NLS%%@dirrm lib/R/library/spatial/Meta
-%%NLS%%@dirrm lib/R/library/spatial
+ at dirrm lib/R/library/spatial/man
+ at dirrm lib/R/library/spatial/libs
+ at dirrm lib/R/library/spatial/latex
+ at dirrm lib/R/library/spatial/html
+ at dirrm lib/R/library/spatial/help
+ at dirrm lib/R/library/spatial/R-ex
+ at dirrm lib/R/library/spatial/R
+ at dirrm lib/R/library/spatial/Meta
+ at dirrm lib/R/library/spatial
%%NLS%%@dirrm lib/R/library/rpart/po/ru/LC_MESSAGES
%%NLS%%@dirrm lib/R/library/rpart/po/ru
%%NLS%%@dirrm lib/R/library/rpart/po/fr/LC_MESSAGES
@@ -9375,6 +9966,20 @@
@dirrm lib/R/library/base/R
@dirrm lib/R/library/base/Meta
@dirrm lib/R/library/base
+ at dirrm lib/R/library/Matrix/Meta
+ at dirrm lib/R/library/Matrix/R
+ at dirrm lib/R/library/Matrix/R-ex
+ at dirrm lib/R/library/Matrix/data
+ at dirrm lib/R/library/Matrix/doc/UFsparse
+ at dirrm lib/R/library/Matrix/doc
+ at dirrm lib/R/library/Matrix/external
+ at dirrm lib/R/library/Matrix/help
+ at dirrm lib/R/library/Matrix/html
+ at dirrm lib/R/library/Matrix/include
+ at dirrm lib/R/library/Matrix/latex
+ at dirrm lib/R/library/Matrix/libs
+ at dirrm lib/R/library/Matrix/man
+ at dirrm lib/R/library/Matrix
@dirrm lib/R/library/MASS/scripts
%%NLS%%@dirrm lib/R/library/MASS/po/fr/LC_MESSAGES
%%NLS%%@dirrm lib/R/library/MASS/po/fr
>Release-Note:
>Audit-Trail:
>Unformatted:
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