ports/133273: [NEW PORT]biology/p5-Bio-Glite:An Perl Interface to G-language

[Wen Heping]

>Number:         133273
>Category:       ports
>Synopsis:       [NEW PORT]biology/p5-Bio-Glite:An Perl Interface to G-language
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Wed Apr 01 14:50:01 UTC 2009
>Closed-Date:
>Last-Modified:
>Originator:     Wen Heping
>Release:        FreeBSD 8.0-CURRENT
>Organization:
ChangAn Middle School
>Environment:
FreeBSD fb8.wenjing.com 8.0-CURRENT FreeBSD 8.0-CURRENT #0: Sun Mar 22 22:12:06 CST 2009     root at fb8.wenjing.com:/usr/obj/usr/src/sys/GENERIC  i386
>Description:
Bio::Glite is an interface to G-language Genome Analysis Environment
through its REST web service (http://www.g-language.org). This module
allows almost everything G-language GAE can do, without installing
all necessary tookits and modules.

Advantage of this module over the standard installation of
G-language GAE package is:
   1. Easy installation from CPAN
   2. Extremely light-weight (less than 1000 lines of code)
   3. Does not require much CPU/RAM (all calculation is done on
the cloud)

Disadvantages includes:
   1. Slower analysis speed
   2. Internet connection is required
   3. No other software interfaces such as the G-language Shell

WWW: http://search.cpan.org/dist/Bio-Glite/
>How-To-Repeat:

>Fix:


Patch attached with submission follows:

# This is a shell archive.  Save it in a file, remove anything before
# this line, and then unpack it by entering "sh file".  Note, it may
# create directories; files and directories will be owned by you and
# have default permissions.
#
# This archive contains:
#
#	p5-Bio-Glite
#	p5-Bio-Glite/Makefile
#	p5-Bio-Glite/distinfo
#	p5-Bio-Glite/pkg-descr
#	p5-Bio-Glite/pkg-plist
#
echo c - p5-Bio-Glite
mkdir -p p5-Bio-Glite > /dev/null 2>&1
echo x - p5-Bio-Glite/Makefile
sed 's/^X//' >p5-Bio-Glite/Makefile << '7d4ec605039b42bbd2f2e7c7f02b8b27'
X# New ports collection makefile for:	p5-Bio-Glite
X# Date created:				1st April, 2009
X# Whom:					Wen Heping <wenheping at gmail.com>
X#
X# $FreeBSD$
X#
X
XPORTNAME=	Bio-Glite
XPORTVERSION=	0.10
XCATEGORIES=	biology perl5
XMASTER_SITES=	CPAN
XPKGNAMEPREFIX=	p5-
X
XMAINTAINER=	wenheping at gmail.com
XCOMMENT=	An Perl Interface to G-language
X
XBUILD_DEPENDS=	p5-Data-Dumper>=2.121:${PORTSDIR}/devel/p5-Data-Dumper \
X		p5-libwww>=5:${PORTSDIR}/www/p5-libwww
XRUN_DEPENDS=	${BUILD_DEPENDS}
X
XPERL_CONFIGURE=	YES
X
XMAN3=	Bio::Glite.3
X
X.include <bsd.port.mk>
7d4ec605039b42bbd2f2e7c7f02b8b27
echo x - p5-Bio-Glite/distinfo
sed 's/^X//' >p5-Bio-Glite/distinfo << '874310c657e59fd351157696919512b2'
XMD5 (Bio-Glite-0.10.tar.gz) = 54a973b4d7332fb9eca63e8b8a712161
XSHA256 (Bio-Glite-0.10.tar.gz) = f747af67efe6feb6daca599034624510f75c6f73f1509f3eef3836f2030dfc71
XSIZE (Bio-Glite-0.10.tar.gz) = 25801
874310c657e59fd351157696919512b2
echo x - p5-Bio-Glite/pkg-descr
sed 's/^X//' >p5-Bio-Glite/pkg-descr << '0d62cd5c273dba69ad3f1f933fec6118'
XBio::Glite is an interface to G-language Genome Analysis Environment
Xthrough its REST web service (http://www.g-language.org). This module
Xallows almost everything G-language GAE can do, without installing
Xall necessary tookits and modules.
X
XAdvantage of this module over the standard installation of
XG-language GAE package is:
X   1. Easy installation from CPAN
X   2. Extremely light-weight (less than 1000 lines of code)
X   3. Does not require much CPU/RAM (all calculation is done on
Xthe cloud)
X
XDisadvantages includes:
X   1. Slower analysis speed
X   2. Internet connection is required
X   3. No other software interfaces such as the G-language Shell
X
XWWW: http://search.cpan.org/dist/Bio-Glite/
0d62cd5c273dba69ad3f1f933fec6118
echo x - p5-Bio-Glite/pkg-plist
sed 's/^X//' >p5-Bio-Glite/pkg-plist << 'be57d8e45296f0cb3f4a9f82806e8dc8'
X%%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/Glite/.packlist
X%%SITE_PERL%%/Bio/Glite.pm
X at dirrmtry %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio/Glite
X at dirrmtry %%SITE_PERL%%/%%PERL_ARCH%%/auto/Bio
X at dirrmtry %%SITE_PERL%%/Bio
be57d8e45296f0cb3f4a9f82806e8dc8
exit



>Release-Note:
>Audit-Trail:
>Unformatted: