ports/104635: [PATCH] biology/py24-biopython: update to 1.42
Thomas Abthorpe
thomas at goodking.ca
Fri Oct 20 22:30:19 UTC 2006
>Number: 104635
>Category: ports
>Synopsis: [PATCH] biology/py24-biopython: update to 1.42
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: update
>Submitter-Id: current-users
>Arrival-Date: Fri Oct 20 22:30:18 GMT 2006
>Closed-Date:
>Last-Modified:
>Originator: Thomas Abthorpe
>Release: FreeBSD 6.2-PRERELEASE i386
>Organization:
GoodKing.Ca
>Environment:
System: FreeBSD goodking.goodking.ca 6.2-PRERELEASE FreeBSD 6.2-PRERELEASE #2: Mon Oct 2 02:05:54 EDT
>Description:
- Update to 1.42
Port maintainer (mauricio at arareko.net) is cc'd.
Generated with FreeBSD Port Tools 0.77
>How-To-Repeat:
>Fix:
--- py24-biopython-1.42.patch begins here ---
Index: Makefile
===================================================================
RCS file: /home/ncvs/ports/biology/py-biopython/Makefile,v
retrieving revision 1.21
diff -u -r1.21 Makefile
--- Makefile 11 Nov 2005 01:15:34 -0000 1.21
+++ Makefile 20 Oct 2006 22:21:57 -0000
@@ -6,9 +6,9 @@
#
PORTNAME= biopython
-PORTVERSION= 1.41
+PORTVERSION= 1.42
CATEGORIES= biology python
-MASTER_SITES= http://www.biopython.org/files/
+MASTER_SITES= http://www.biopython.org/DIST/
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= mauricio at arareko.net
Index: distinfo
===================================================================
RCS file: /home/ncvs/ports/biology/py-biopython/distinfo,v
retrieving revision 1.12
diff -u -r1.12 distinfo
--- distinfo 11 Nov 2005 01:15:34 -0000 1.12
+++ distinfo 20 Oct 2006 22:21:57 -0000
@@ -1,3 +1,3 @@
-MD5 (biopython-1.41.tar.gz) = 03f8efc258fb49b07d1a2b642fa8362e
-SHA256 (biopython-1.41.tar.gz) = 15b708b7635fd993aad3c53fd4cfc28601da6d4332b027d09899f1cb5178cef9
-SIZE (biopython-1.41.tar.gz) = 3807547
+MD5 (biopython-1.42.tar.gz) = 6d9bf58d0fcfa5a3b2053ad419069ff3
+SHA256 (biopython-1.42.tar.gz) = ba4d00fdf7de67196ecba317dee09a14850b40596bd83d73e458c5f19fc9fc58
+SIZE (biopython-1.42.tar.gz) = 3933507
Index: pkg-plist
===================================================================
RCS file: /home/ncvs/ports/biology/py-biopython/pkg-plist,v
retrieving revision 1.11
diff -u -r1.11 pkg-plist
--- pkg-plist 11 Nov 2005 01:15:34 -0000 1.11
+++ pkg-plist 20 Oct 2006 22:21:57 -0000
@@ -7,9 +7,6 @@
%%PYTHON_SITELIBDIR%%/Bio/Ais/__init__.py
%%PYTHON_SITELIBDIR%%/Bio/Ais/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/Ais/__init__.pyo
-%%PYTHON_SITELIBDIR%%/Bio/Ais/example_ais2.py
-%%PYTHON_SITELIBDIR%%/Bio/Ais/example_ais2.pyc
-%%PYTHON_SITELIBDIR%%/Bio/Ais/example_ais2.pyo
%%PYTHON_SITELIBDIR%%/Bio/Align/AlignInfo.py
%%PYTHON_SITELIBDIR%%/Bio/Align/AlignInfo.pyc
%%PYTHON_SITELIBDIR%%/Bio/Align/AlignInfo.pyo
@@ -98,9 +95,6 @@
%%PYTHON_SITELIBDIR%%/Bio/Cluster/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/Cluster/__init__.pyo
%%PYTHON_SITELIBDIR%%/Bio/Cluster/cluster.so
-%%PYTHON_SITELIBDIR%%/Bio/Cluster/data.py
-%%PYTHON_SITELIBDIR%%/Bio/Cluster/data.pyc
-%%PYTHON_SITELIBDIR%%/Bio/Cluster/data.pyo
%%PYTHON_SITELIBDIR%%/Bio/Compass/__init__.py
%%PYTHON_SITELIBDIR%%/Bio/Compass/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/Compass/__init__.pyo
@@ -678,10 +672,6 @@
%%PYTHON_SITELIBDIR%%/Bio/PDB/__init__.py
%%PYTHON_SITELIBDIR%%/Bio/PDB/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/PDB/__init__.pyo
-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/MMCIFlex.so
-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/__init__.py
-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/__init__.pyc
-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/__init__.pyo
%%PYTHON_SITELIBDIR%%/Bio/PDB/parse_pdb_header.py
%%PYTHON_SITELIBDIR%%/Bio/PDB/parse_pdb_header.pyc
%%PYTHON_SITELIBDIR%%/Bio/PDB/parse_pdb_header.pyo
@@ -727,12 +717,6 @@
%%PYTHON_SITELIBDIR%%/Bio/Rebase/__init__.py
%%PYTHON_SITELIBDIR%%/Bio/Rebase/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/Rebase/__init__.pyo
-%%PYTHON_SITELIBDIR%%/Bio/RecordFile.py
-%%PYTHON_SITELIBDIR%%/Bio/RecordFile.pyc
-%%PYTHON_SITELIBDIR%%/Bio/RecordFile.pyo
-%%PYTHON_SITELIBDIR%%/Bio/ReseekFile.py
-%%PYTHON_SITELIBDIR%%/Bio/ReseekFile.pyc
-%%PYTHON_SITELIBDIR%%/Bio/ReseekFile.pyo
%%PYTHON_SITELIBDIR%%/Bio/Restriction/DNAUtils.so
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.py
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.pyc
@@ -791,9 +775,6 @@
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/__init__.py
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/__init__.pyo
-%%PYTHON_SITELIBDIR%%/Bio/SVM.py
-%%PYTHON_SITELIBDIR%%/Bio/SVM.pyc
-%%PYTHON_SITELIBDIR%%/Bio/SVM.pyo
%%PYTHON_SITELIBDIR%%/Bio/Saf/Record.py
%%PYTHON_SITELIBDIR%%/Bio/Saf/Record.pyc
%%PYTHON_SITELIBDIR%%/Bio/Saf/Record.pyo
@@ -942,9 +923,7 @@
%%PYTHON_SITELIBDIR%%/Bio/builders/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/builders/__init__.pyo
%%PYTHON_SITELIBDIR%%/Bio/cMarkovModel.so
-%%PYTHON_SITELIBDIR%%/Bio/cSVM.so
%%PYTHON_SITELIBDIR%%/Bio/cdistance.so
-%%PYTHON_SITELIBDIR%%/Bio/ckMeans.so
%%PYTHON_SITELIBDIR%%/Bio/clistfns.so
%%PYTHON_SITELIBDIR%%/Bio/cmathfns.so
%%PYTHON_SITELIBDIR%%/Bio/config/DBRegistry.py
@@ -1075,9 +1054,6 @@
%%PYTHON_SITELIBDIR%%/Bio/formatdefs/swissprot.py
%%PYTHON_SITELIBDIR%%/Bio/formatdefs/swissprot.pyc
%%PYTHON_SITELIBDIR%%/Bio/formatdefs/swissprot.pyo
-%%PYTHON_SITELIBDIR%%/Bio/kMeans.py
-%%PYTHON_SITELIBDIR%%/Bio/kMeans.pyc
-%%PYTHON_SITELIBDIR%%/Bio/kMeans.pyo
%%PYTHON_SITELIBDIR%%/Bio/kNN.py
%%PYTHON_SITELIBDIR%%/Bio/kNN.pyc
%%PYTHON_SITELIBDIR%%/Bio/kNN.pyo
@@ -1093,9 +1069,6 @@
%%PYTHON_SITELIBDIR%%/Bio/pairwise2.py
%%PYTHON_SITELIBDIR%%/Bio/pairwise2.pyc
%%PYTHON_SITELIBDIR%%/Bio/pairwise2.pyo
-%%PYTHON_SITELIBDIR%%/Bio/sequtils.py
-%%PYTHON_SITELIBDIR%%/Bio/sequtils.pyc
-%%PYTHON_SITELIBDIR%%/Bio/sequtils.pyo
%%PYTHON_SITELIBDIR%%/Bio/stringfns.py
%%PYTHON_SITELIBDIR%%/Bio/stringfns.pyc
%%PYTHON_SITELIBDIR%%/Bio/stringfns.pyo
@@ -1121,9 +1094,6 @@
%%PYTHON_SITELIBDIR%%/Bio/writers/__init__.py
%%PYTHON_SITELIBDIR%%/Bio/writers/__init__.pyc
%%PYTHON_SITELIBDIR%%/Bio/writers/__init__.pyo
-%%PYTHON_SITELIBDIR%%/Bio/xkMeans.py
-%%PYTHON_SITELIBDIR%%/Bio/xkMeans.pyc
-%%PYTHON_SITELIBDIR%%/Bio/xkMeans.pyo
%%PYTHON_SITELIBDIR%%/BioSQL/BioSeq.py
%%PYTHON_SITELIBDIR%%/BioSQL/BioSeq.pyc
%%PYTHON_SITELIBDIR%%/BioSQL/BioSeq.pyo
@@ -1184,92 +1154,91 @@
%%PYTHON_SITELIBDIR%%/Martel/setup.py
%%PYTHON_SITELIBDIR%%/Martel/setup.pyc
%%PYTHON_SITELIBDIR%%/Martel/setup.pyo
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Affy
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Ais
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Align
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/AlignAce
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Alphabet
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Application
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Blast
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/CAPS
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/CDD
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Clustalw
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Cluster
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Compass
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Crystal
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Data
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/ECell
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Emboss
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Encodings
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Enzyme
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/FSSP
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Fasta
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Crossover
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Mutation
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Repair
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Selection
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/GFF
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/GenBank
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Geo
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Gobase
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Graphics
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/HMM
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/IntelliGenetics
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/InterPro
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Compound
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Enzyme
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Map
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Kabat
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/LocusLink
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/MEME
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Medline
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/MetaTool
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Mindy
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/MultiProc
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/NBRF
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/NMR
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Ndb
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/BackPropagation
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/Gene
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Nexus
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/PDB
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Parsers
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway/Rep
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Prosite
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Rebase
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction/_Update
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/SCOP
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Saf
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqIO
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqUtils
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Sequencing
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Statistics
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/SubsMat
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/SwissProt
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/UniGene
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/WWW
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/Wise
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/Search
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/SeqRecord
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/builders
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/config
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/dbdefs
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/blast
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/embl
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/swissprot
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions
- at dirrm %%PYTHON_SITELIBDIR%%/Bio/formatdefs
+ at dirrm %%PYTHON_SITELIBDIR%%/Martel
+ at dirrm %%PYTHON_SITELIBDIR%%/BioSQL
@dirrm %%PYTHON_SITELIBDIR%%/Bio/writers/SeqRecord
@dirrm %%PYTHON_SITELIBDIR%%/Bio/writers
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/formatdefs
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/swissprot
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/embl
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/blast
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/dbdefs
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/config
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/SeqRecord
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/Search
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/builders
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Wise
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/WWW
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/UniGene
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/SwissProt
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/SubsMat
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Statistics
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Sequencing
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqUtils
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqIO
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Saf
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/SCOP
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction/_Update
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Rebase
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Prosite
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway/Rep
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Parsers
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/PDB
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Nexus
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/Gene
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/BackPropagation
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Ndb
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/NMR
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/NBRF
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/MultiProc
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Mindy
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/MetaTool
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Medline
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/MEME
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/LocusLink
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Kabat
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Map
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Enzyme
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Compound
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/InterPro
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/IntelliGenetics
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/HMM
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Graphics
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Gobase
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Geo
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/GenBank
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/GFF
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Selection
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Repair
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Mutation
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Crossover
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/GA
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Fasta
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/FSSP
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Enzyme
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Encodings
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Emboss
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/ECell
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Data
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Crystal
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Compass
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Cluster
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Clustalw
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/CDD
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/CAPS
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Blast
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Application
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Alphabet
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/AlignAce
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Align
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Ais
+ at dirrm %%PYTHON_SITELIBDIR%%/Bio/Affy
@dirrm %%PYTHON_SITELIBDIR%%/Bio
- at dirrm %%PYTHON_SITELIBDIR%%/BioSQL
- at dirrm %%PYTHON_SITELIBDIR%%/Martel
--- py24-biopython-1.42.patch ends here ---
>Release-Note:
>Audit-Trail:
>Unformatted:
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