ports/104261: R : update to R-2.4.0
Vittorio De Martino
vdemart1 at tin.it
Tue Oct 10 13:20:28 UTC 2006
>Number: 104261
>Category: ports
>Synopsis: R : update to R-2.4.0
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: change-request
>Submitter-Id: current-users
>Arrival-Date: Tue Oct 10 13:20:26 GMT 2006
>Closed-Date:
>Last-Modified:
>Originator: Vittorio De Martino
>Release: 6.1
>Organization:
>Environment:
FreeBSD statistiche 6.1-RELEASE FreeBSD 6.1-RELEASE #1: Fri Sep 8 17:07:35 CEST 2006 root at statistiche:/usr/obj/usr/src/sys/SERVER5 i386
>Description:
This is the update of R from version 2.3.1 to 2.4.0 to be submitted to the mantainer
>How-To-Repeat:
>Fix:
Patch attached with submission follows:
diff -ruN R.orig/Makefile R/Makefile
--- R.orig/Makefile Sun Sep 3 18:03:30 2006
+++ R/Makefile Tue Oct 10 13:14:54 2006
@@ -7,7 +7,7 @@
#
PORTNAME= R
-PORTVERSION= 2.3.1
+PORTVERSION= 2.4.0
CATEGORIES= math lang
MASTER_SITES= http://cran.r-project.org/src/base/R-2/ \
ftp://cran.r-project.org/pub/R/src/base/R-2/ \
diff -ruN R.orig/distinfo R/distinfo
--- R.orig/distinfo Sun Sep 3 18:03:30 2006
+++ R/distinfo Tue Oct 10 13:29:54 2006
@@ -1,3 +1,3 @@
-MD5 (R-2.3.1.tar.gz) = a1d6d8081af4c71006a6e5a3ed54e4da
-SHA256 (R-2.3.1.tar.gz) = 1952bcf0d169cfe98aef33015a988f85eda72bf0223cd5833669e197fea2e427
-SIZE (R-2.3.1.tar.gz) = 14285120
+MD5 (R-2.4.0.tar.gz) = f32379469d8712e9f5dd6435d30127d3
+SHA256 (R-2.4.0.tar.gz) = 0a0263acf42230c291ca5cf371541077aae3a1f8a586e1bf336bdb6af76946e2
+SIZE (R-2.4.0.tar.gz) = 14597440
diff -ruN R.orig/pkg-plist R/pkg-plist
--- R.orig/pkg-plist Sun Sep 3 18:03:30 2006
+++ R/pkg-plist Tue Oct 10 14:56:27 2006
@@ -16,11 +16,14 @@
lib/R/bin/Rprof
lib/R/bin/SHLIB
lib/R/bin/Sd2Rd
+lib/R/bin/Stangle
+lib/R/bin/Sweave
lib/R/bin/build
lib/R/bin/check
lib/R/bin/config
lib/R/bin/exec/R
lib/R/bin/f77_f2c
+lib/R/bin/javareconf
lib/R/bin/libtool
lib/R/bin/mkinstalldirs
lib/R/bin/pager
@@ -62,6 +65,7 @@
lib/R/include/Rconfig.h
lib/R/include/Rdefines.h
lib/R/include/Rdevices.h
+lib/R/include/Rembedded.h
lib/R/include/Rgraphics.h
lib/R/include/Rinterface.h
lib/R/include/Rinternals.h
@@ -707,6 +711,7 @@
lib/R/library/base/Meta/package.rds
lib/R/library/base/R-ex/Arithmetic.R
lib/R/library/base/R-ex/Bessel.R
+lib/R/library/base/R-ex/Colon.R
lib/R/library/base/R-ex/Comparison.R
lib/R/library/base/R-ex/Constants.R
lib/R/library/base/R-ex/Control.R
@@ -724,6 +729,7 @@
lib/R/library/base/R-ex/Memory.R
lib/R/library/base/R-ex/NA.R
lib/R/library/base/R-ex/NULL.R
+lib/R/library/base/R-ex/Ops.Date.R
lib/R/library/base/R-ex/Paren.R
lib/R/library/base/R-ex/Platform.R
lib/R/library/base/R-ex/Primitive.R
@@ -861,6 +867,7 @@
lib/R/library/base/R-ex/is.object.R
lib/R/library/base/R-ex/is.recursive.R
lib/R/library/base/R-ex/isR.R
+lib/R/library/base/R-ex/isS4.R
lib/R/library/base/R-ex/isSymmetric.R
lib/R/library/base/R-ex/jitter.R
lib/R/library/base/R-ex/kappa.R
@@ -934,9 +941,9 @@
lib/R/library/base/R-ex/qr.R
lib/R/library/base/R-ex/qraux.R
lib/R/library/base/R-ex/quit.R
-lib/R/library/base/R-ex/r2dtable.R
lib/R/library/base/R-ex/range.R
lib/R/library/base/R-ex/rank.R
+lib/R/library/base/R-ex/rapply.R
lib/R/library/base/R-ex/raw.R
lib/R/library/base/R-ex/rawConversion.R
lib/R/library/base/R-ex/readBin.R
@@ -1035,6 +1042,7 @@
lib/R/library/base/help/Arithmetic
lib/R/library/base/help/AsIs
lib/R/library/base/help/Bessel
+lib/R/library/base/help/Colon
lib/R/library/base/help/Comparison
lib/R/library/base/help/Constants
lib/R/library/base/help/Control
@@ -1059,6 +1067,7 @@
lib/R/library/base/help/NA
lib/R/library/base/help/NULL
lib/R/library/base/help/NumericConstants
+lib/R/library/base/help/Ops.Date
lib/R/library/base/help/Paren
lib/R/library/base/help/Platform
lib/R/library/base/help/Primitive
@@ -1222,6 +1231,7 @@
lib/R/library/base/help/is.recursive
lib/R/library/base/help/is.single
lib/R/library/base/help/isR
+lib/R/library/base/help/isS4
lib/R/library/base/help/isSymmetric
lib/R/library/base/help/jitter
lib/R/library/base/help/kappa
@@ -1305,9 +1315,9 @@
lib/R/library/base/help/qr
lib/R/library/base/help/qraux
lib/R/library/base/help/quit
-lib/R/library/base/help/r2dtable
lib/R/library/base/help/range
lib/R/library/base/help/rank
+lib/R/library/base/help/rapply
lib/R/library/base/help/raw
lib/R/library/base/help/rawConversion
lib/R/library/base/help/read.table
@@ -1417,6 +1427,7 @@
lib/R/library/base/html/Arithmetic.html
lib/R/library/base/html/AsIs.html
lib/R/library/base/html/Bessel.html
+lib/R/library/base/html/Colon.html
lib/R/library/base/html/Comparison.html
lib/R/library/base/html/Constants.html
lib/R/library/base/html/Control.html
@@ -1441,6 +1452,7 @@
lib/R/library/base/html/NA.html
lib/R/library/base/html/NULL.html
lib/R/library/base/html/NumericConstants.html
+lib/R/library/base/html/Ops.Date.html
lib/R/library/base/html/Paren.html
lib/R/library/base/html/Platform.html
lib/R/library/base/html/Primitive.html
@@ -1604,6 +1616,7 @@
lib/R/library/base/html/is.recursive.html
lib/R/library/base/html/is.single.html
lib/R/library/base/html/isR.html
+lib/R/library/base/html/isS4.html
lib/R/library/base/html/isSymmetric.html
lib/R/library/base/html/jitter.html
lib/R/library/base/html/kappa.html
@@ -1687,9 +1700,9 @@
lib/R/library/base/html/qr.html
lib/R/library/base/html/qraux.html
lib/R/library/base/html/quit.html
-lib/R/library/base/html/r2dtable.html
lib/R/library/base/html/range.html
lib/R/library/base/html/rank.html
+lib/R/library/base/html/rapply.html
lib/R/library/base/html/raw.html
lib/R/library/base/html/rawConversion.html
lib/R/library/base/html/read.table.html
@@ -1798,6 +1811,7 @@
lib/R/library/base/latex/Arithmetic.tex
lib/R/library/base/latex/AsIs.tex
lib/R/library/base/latex/Bessel.tex
+lib/R/library/base/latex/Colon.tex
lib/R/library/base/latex/Comparison.tex
lib/R/library/base/latex/Constants.tex
lib/R/library/base/latex/Control.tex
@@ -1822,6 +1836,7 @@
lib/R/library/base/latex/NA.tex
lib/R/library/base/latex/NULL.tex
lib/R/library/base/latex/NumericConstants.tex
+lib/R/library/base/latex/Ops.Date.tex
lib/R/library/base/latex/Paren.tex
lib/R/library/base/latex/Platform.tex
lib/R/library/base/latex/Primitive.tex
@@ -1985,6 +2000,7 @@
lib/R/library/base/latex/is.recursive.tex
lib/R/library/base/latex/is.single.tex
lib/R/library/base/latex/isR.tex
+lib/R/library/base/latex/isS4.tex
lib/R/library/base/latex/isSymmetric.tex
lib/R/library/base/latex/jitter.tex
lib/R/library/base/latex/kappa.tex
@@ -2068,9 +2084,9 @@
lib/R/library/base/latex/qr.tex
lib/R/library/base/latex/qraux.tex
lib/R/library/base/latex/quit.tex
-lib/R/library/base/latex/r2dtable.tex
lib/R/library/base/latex/range.tex
lib/R/library/base/latex/rank.tex
+lib/R/library/base/latex/rapply.tex
lib/R/library/base/latex/raw.tex
lib/R/library/base/latex/rawConversion.tex
lib/R/library/base/latex/read.table.tex
@@ -3131,6 +3147,7 @@
lib/R/library/foreign/COPYING
lib/R/library/foreign/DESCRIPTION
lib/R/library/foreign/INDEX
+lib/R/library/foreign/LICENCE
lib/R/library/foreign/Meta/Rd.rds
lib/R/library/foreign/Meta/hsearch.rds
lib/R/library/foreign/Meta/nsInfo.rds
@@ -3227,6 +3244,7 @@
lib/R/library/grDevices/R-ex/contourLines.R
lib/R/library/grDevices/R-ex/convertColor.R
lib/R/library/grDevices/R-ex/dev.R
+lib/R/library/grDevices/R-ex/dev.interactive.R
lib/R/library/grDevices/R-ex/dev2.R
lib/R/library/grDevices/R-ex/extendrange.R
lib/R/library/grDevices/R-ex/getGraphicsEvent.R
@@ -3244,6 +3262,7 @@
lib/R/library/grDevices/R-ex/png.R
lib/R/library/grDevices/R-ex/postscript.R
lib/R/library/grDevices/R-ex/postscriptFonts.R
+lib/R/library/grDevices/R-ex/ps.options.R
lib/R/library/grDevices/R-ex/quartzFonts.R
lib/R/library/grDevices/R-ex/recordGraphics.R
lib/R/library/grDevices/R-ex/rgb.R
@@ -3383,7 +3402,7 @@
lib/R/library/grDevices/help/embedFonts
lib/R/library/grDevices/help/extendrange
lib/R/library/grDevices/help/getGraphicsEvent
-lib/R/library/grDevices/help/grDevices-deprecated
+lib/R/library/grDevices/help/grDevices-defunct
lib/R/library/grDevices/help/grDevices-package
lib/R/library/grDevices/help/gray
lib/R/library/grDevices/help/gray.colors
@@ -3400,6 +3419,7 @@
lib/R/library/grDevices/help/png
lib/R/library/grDevices/help/postscript
lib/R/library/grDevices/help/postscriptFonts
+lib/R/library/grDevices/help/ps.options
lib/R/library/grDevices/help/quartz
lib/R/library/grDevices/help/quartzFonts
lib/R/library/grDevices/help/recordGraphics
@@ -3433,7 +3453,7 @@
lib/R/library/grDevices/html/embedFonts.html
lib/R/library/grDevices/html/extendrange.html
lib/R/library/grDevices/html/getGraphicsEvent.html
-lib/R/library/grDevices/html/grDevices-deprecated.html
+lib/R/library/grDevices/html/grDevices-defunct.html
lib/R/library/grDevices/html/grDevices-package.html
lib/R/library/grDevices/html/gray.colors.html
lib/R/library/grDevices/html/gray.html
@@ -3450,6 +3470,7 @@
lib/R/library/grDevices/html/png.html
lib/R/library/grDevices/html/postscript.html
lib/R/library/grDevices/html/postscriptFonts.html
+lib/R/library/grDevices/html/ps.options.html
lib/R/library/grDevices/html/quartz.html
lib/R/library/grDevices/html/quartzFonts.html
lib/R/library/grDevices/html/recordGraphics.html
@@ -3482,7 +3503,7 @@
lib/R/library/grDevices/latex/embedFonts.tex
lib/R/library/grDevices/latex/extendrange.tex
lib/R/library/grDevices/latex/getGraphicsEvent.tex
-lib/R/library/grDevices/latex/grDevices-deprecated.tex
+lib/R/library/grDevices/latex/grDevices-defunct.tex
lib/R/library/grDevices/latex/grDevices-package.tex
lib/R/library/grDevices/latex/gray.colors.tex
lib/R/library/grDevices/latex/gray.tex
@@ -3499,6 +3520,7 @@
lib/R/library/grDevices/latex/png.tex
lib/R/library/grDevices/latex/postscript.tex
lib/R/library/grDevices/latex/postscriptFonts.tex
+lib/R/library/grDevices/latex/ps.options.tex
lib/R/library/grDevices/latex/quartz.tex
lib/R/library/grDevices/latex/quartzFonts.tex
lib/R/library/grDevices/latex/recordGraphics.tex
@@ -3935,6 +3957,7 @@
lib/R/library/grid/help/grid.xaxis
lib/R/library/grid/help/grid.xspline
lib/R/library/grid/help/grid.yaxis
+lib/R/library/grid/help/grobName
lib/R/library/grid/help/grobWidth
lib/R/library/grid/help/grobX
lib/R/library/grid/help/plotViewport
@@ -4007,6 +4030,7 @@
lib/R/library/grid/html/grid.xaxis.html
lib/R/library/grid/html/grid.xspline.html
lib/R/library/grid/html/grid.yaxis.html
+lib/R/library/grid/html/grobName.html
lib/R/library/grid/html/grobWidth.html
lib/R/library/grid/html/grobX.html
lib/R/library/grid/html/plotViewport.html
@@ -4078,6 +4102,7 @@
lib/R/library/grid/latex/grid.xaxis.tex
lib/R/library/grid/latex/grid.xspline.tex
lib/R/library/grid/latex/grid.yaxis.tex
+lib/R/library/grid/latex/grobName.tex
lib/R/library/grid/latex/grobWidth.tex
lib/R/library/grid/latex/grobX.tex
lib/R/library/grid/latex/plotViewport.tex
@@ -4110,6 +4135,7 @@
lib/R/library/grid/po/ru/LC_MESSAGES/R-grid.mo
lib/R/library/grid/po/ru/LC_MESSAGES/grid.mo
lib/R/library/lattice/CONTENTS
+lib/R/library/lattice/COPYING
lib/R/library/lattice/Changes
lib/R/library/lattice/DESCRIPTION
lib/R/library/lattice/INDEX
@@ -4121,6 +4147,7 @@
lib/R/library/lattice/Meta/package.rds
lib/R/library/lattice/NAMESPACE
lib/R/library/lattice/R-ex/Lattice.R
+lib/R/library/lattice/R-ex/axis.default.R
lib/R/library/lattice/R-ex/barchart.table.R
lib/R/library/lattice/R-ex/barley.R
lib/R/library/lattice/R-ex/cloud.R
@@ -4157,6 +4184,7 @@
lib/R/library/lattice/help/AnIndex
lib/R/library/lattice/help/Lattice
lib/R/library/lattice/help/Rows
+lib/R/library/lattice/help/axis.default
lib/R/library/lattice/help/banking
lib/R/library/lattice/help/barchart.table
lib/R/library/lattice/help/barley
@@ -4175,6 +4203,7 @@
lib/R/library/lattice/help/make.groups
lib/R/library/lattice/help/melanoma
lib/R/library/lattice/help/oneway
+lib/R/library/lattice/help/packet.panel.default
lib/R/library/lattice/help/panel.axis
lib/R/library/lattice/help/panel.barchart
lib/R/library/lattice/help/panel.bwplot
@@ -4184,6 +4213,7 @@
lib/R/library/lattice/help/panel.functions
lib/R/library/lattice/help/panel.histogram
lib/R/library/lattice/help/panel.levelplot
+lib/R/library/lattice/help/panel.number
lib/R/library/lattice/help/panel.pairs
lib/R/library/lattice/help/panel.parallel
lib/R/library/lattice/help/panel.qqmath
@@ -4212,6 +4242,7 @@
lib/R/library/lattice/html/00Index.html
lib/R/library/lattice/html/Lattice.html
lib/R/library/lattice/html/Rows.html
+lib/R/library/lattice/html/axis.default.html
lib/R/library/lattice/html/banking.html
lib/R/library/lattice/html/barchart.table.html
lib/R/library/lattice/html/barley.html
@@ -4230,6 +4261,7 @@
lib/R/library/lattice/html/make.groups.html
lib/R/library/lattice/html/melanoma.html
lib/R/library/lattice/html/oneway.html
+lib/R/library/lattice/html/packet.panel.default.html
lib/R/library/lattice/html/panel.axis.html
lib/R/library/lattice/html/panel.barchart.html
lib/R/library/lattice/html/panel.bwplot.html
@@ -4239,6 +4271,7 @@
lib/R/library/lattice/html/panel.functions.html
lib/R/library/lattice/html/panel.histogram.html
lib/R/library/lattice/html/panel.levelplot.html
+lib/R/library/lattice/html/panel.number.html
lib/R/library/lattice/html/panel.pairs.html
lib/R/library/lattice/html/panel.parallel.html
lib/R/library/lattice/html/panel.qqmath.html
@@ -4266,6 +4299,7 @@
lib/R/library/lattice/html/xyplot.html
lib/R/library/lattice/latex/Lattice.tex
lib/R/library/lattice/latex/Rows.tex
+lib/R/library/lattice/latex/axis.default.tex
lib/R/library/lattice/latex/banking.tex
lib/R/library/lattice/latex/barchart.table.tex
lib/R/library/lattice/latex/barley.tex
@@ -4284,6 +4318,7 @@
lib/R/library/lattice/latex/make.groups.tex
lib/R/library/lattice/latex/melanoma.tex
lib/R/library/lattice/latex/oneway.tex
+lib/R/library/lattice/latex/packet.panel.default.tex
lib/R/library/lattice/latex/panel.axis.tex
lib/R/library/lattice/latex/panel.barchart.tex
lib/R/library/lattice/latex/panel.bwplot.tex
@@ -4293,6 +4328,7 @@
lib/R/library/lattice/latex/panel.functions.tex
lib/R/library/lattice/latex/panel.histogram.tex
lib/R/library/lattice/latex/panel.levelplot.tex
+lib/R/library/lattice/latex/panel.number.tex
lib/R/library/lattice/latex/panel.pairs.tex
lib/R/library/lattice/latex/panel.parallel.tex
lib/R/library/lattice/latex/panel.qqmath.tex
@@ -4331,6 +4367,7 @@
lib/R/library/methods/R-ex/GenericFunctions.R
lib/R/library/methods/R-ex/NextMethod.R
lib/R/library/methods/R-ex/RMethodUtils.R
+lib/R/library/methods/R-ex/S4groupGeneric.R
lib/R/library/methods/R-ex/as.R
lib/R/library/methods/R-ex/canCoerce.R
lib/R/library/methods/R-ex/cbind2.R
@@ -4375,6 +4412,7 @@
lib/R/library/methods/help/ObjectsWithPackage-class
lib/R/library/methods/help/RClassUtils
lib/R/library/methods/help/RMethodUtils
+lib/R/library/methods/help/S4groupGeneric
lib/R/library/methods/help/SClassExtension-class
lib/R/library/methods/help/Session
lib/R/library/methods/help/StructureClasses
@@ -4433,6 +4471,7 @@
lib/R/library/methods/html/ObjectsWithPackage-class.html
lib/R/library/methods/html/RClassUtils.html
lib/R/library/methods/html/RMethodUtils.html
+lib/R/library/methods/html/S4groupGeneric.html
lib/R/library/methods/html/SClassExtension-class.html
lib/R/library/methods/html/Session.html
lib/R/library/methods/html/StructureClasses.html
@@ -4490,6 +4529,7 @@
lib/R/library/methods/latex/ObjectsWithPackage-class.tex
lib/R/library/methods/latex/RClassUtils.tex
lib/R/library/methods/latex/RMethodUtils.tex
+lib/R/library/methods/latex/S4groupGeneric.tex
lib/R/library/methods/latex/SClassExtension-class.tex
lib/R/library/methods/latex/Session.tex
lib/R/library/methods/latex/StructureClasses.tex
@@ -5938,6 +5978,7 @@
lib/R/library/rpart/CONTENTS
lib/R/library/rpart/DESCRIPTION
lib/R/library/rpart/INDEX
+lib/R/library/rpart/LICENCE
lib/R/library/rpart/Meta/Rd.rds
lib/R/library/rpart/Meta/data.rds
lib/R/library/rpart/Meta/hsearch.rds
@@ -6483,6 +6524,7 @@
lib/R/library/stats/R-ex/qqnorm.R
lib/R/library/stats/R-ex/quade.test.R
lib/R/library/stats/R-ex/quantile.R
+lib/R/library/stats/R-ex/r2dtable.R
lib/R/library/stats/R-ex/read.ftable.R
lib/R/library/stats/R-ex/rect.hclust.R
lib/R/library/stats/R-ex/relevel.R
@@ -6780,6 +6822,7 @@
lib/R/library/stats/help/qqnorm
lib/R/library/stats/help/quade.test
lib/R/library/stats/help/quantile
+lib/R/library/stats/help/r2dtable
lib/R/library/stats/help/read.ftable
lib/R/library/stats/help/rect.hclust
lib/R/library/stats/help/relevel
@@ -7084,6 +7127,7 @@
lib/R/library/stats/html/qqnorm.html
lib/R/library/stats/html/quade.test.html
lib/R/library/stats/html/quantile.html
+lib/R/library/stats/html/r2dtable.html
lib/R/library/stats/html/read.ftable.html
lib/R/library/stats/html/rect.hclust.html
lib/R/library/stats/html/relevel.html
@@ -7387,6 +7431,7 @@
lib/R/library/stats/latex/qqnorm.tex
lib/R/library/stats/latex/quade.test.tex
lib/R/library/stats/latex/quantile.tex
+lib/R/library/stats/latex/r2dtable.tex
lib/R/library/stats/latex/read.ftable.tex
lib/R/library/stats/latex/rect.hclust.tex
lib/R/library/stats/latex/relevel.tex
@@ -7471,6 +7516,8 @@
lib/R/library/stats/po/ko/LC_MESSAGES/stats.mo
lib/R/library/stats/po/pt_BR/LC_MESSAGES/R-stats.mo
lib/R/library/stats/po/pt_BR/LC_MESSAGES/stats.mo
+lib/R/library/stats/po/ru/LC_MESSAGES/R-stats.mo
+lib/R/library/stats/po/ru/LC_MESSAGES/stats.mo
lib/R/library/stats/po/zh_CN/LC_MESSAGES/R-stats.mo
lib/R/library/stats4/CONTENTS
lib/R/library/stats4/DESCRIPTION
@@ -7801,17 +7848,17 @@
lib/R/library/tcltk/Meta/Rd.rds
lib/R/library/tcltk/Meta/demo.rds
lib/R/library/tcltk/Meta/hsearch.rds
-%%TCLTK%%lib/R/library/tcltk/Meta/nsInfo.rds
+lib/R/library/tcltk/Meta/nsInfo.rds
lib/R/library/tcltk/Meta/package.rds
-%%TCLTK%%lib/R/library/tcltk/NAMESPACE
+lib/R/library/tcltk/NAMESPACE
lib/R/library/tcltk/R-ex/TclInterface.R
lib/R/library/tcltk/R-ex/TkCommands.R
lib/R/library/tcltk/R-ex/TkWidgetcmds.R
lib/R/library/tcltk/R-ex/TkWidgets.R
lib/R/library/tcltk/R-ex/tclServiceMode.R
lib/R/library/tcltk/R/tcltk
-%%TCLTK%%lib/R/library/tcltk/R/tcltk.rdb
-%%TCLTK%%lib/R/library/tcltk/R/tcltk.rdx
+lib/R/library/tcltk/R/tcltk.rdb
+lib/R/library/tcltk/R/tcltk.rdx
lib/R/library/tcltk/demo/tkcanvas.R
lib/R/library/tcltk/demo/tkdensity.R
lib/R/library/tcltk/demo/tkfaq.R
@@ -7833,7 +7880,7 @@
lib/R/library/tcltk/help/TkWidgetcmds
lib/R/library/tcltk/help/TkWidgets
lib/R/library/tcltk/help/tclServiceMode
-lib/R/library/tcltk/help/tcltk-deprecated
+lib/R/library/tcltk/help/tcltk-defunct
lib/R/library/tcltk/help/tcltk-package
lib/R/library/tcltk/help/tkStartGUI
lib/R/library/tcltk/help/tk_select.list
@@ -7844,7 +7891,7 @@
lib/R/library/tcltk/html/TkWidgetcmds.html
lib/R/library/tcltk/html/TkWidgets.html
lib/R/library/tcltk/html/tclServiceMode.html
-lib/R/library/tcltk/html/tcltk-deprecated.html
+lib/R/library/tcltk/html/tcltk-defunct.html
lib/R/library/tcltk/html/tcltk-package.html
lib/R/library/tcltk/html/tkStartGUI.html
lib/R/library/tcltk/html/tk_select.list.html
@@ -7854,12 +7901,12 @@
lib/R/library/tcltk/latex/TkWidgetcmds.tex
lib/R/library/tcltk/latex/TkWidgets.tex
lib/R/library/tcltk/latex/tclServiceMode.tex
-lib/R/library/tcltk/latex/tcltk-deprecated.tex
+lib/R/library/tcltk/latex/tcltk-defunct.tex
lib/R/library/tcltk/latex/tcltk-package.tex
lib/R/library/tcltk/latex/tkStartGUI.tex
lib/R/library/tcltk/latex/tk_select.list.tex
lib/R/library/tcltk/latex/tkpager.tex
-%%TCLTK%%lib/R/library/tcltk/libs/tcltk.so
+lib/R/library/tcltk/libs/tcltk.so
lib/R/library/tcltk/man/tcltk.Rd.gz
lib/R/library/tcltk/po/en at quot/LC_MESSAGES/R-tcltk.mo
lib/R/library/tcltk/po/fr/LC_MESSAGES/R-tcltk.mo
@@ -8000,6 +8047,8 @@
lib/R/library/utils/NAMESPACE
lib/R/library/utils/R-ex/RSiteSearch.R
lib/R/library/utils/R-ex/Rprof.R
+lib/R/library/utils/R-ex/Rprofmem.R
+lib/R/library/utils/R-ex/SHLIB.R
lib/R/library/utils/R-ex/Sweave.R
lib/R/library/utils/R-ex/SweaveSyntConv.R
lib/R/library/utils/R-ex/URLencode.R
@@ -8010,6 +8059,7 @@
lib/R/library/utils/R-ex/capture.output.R
lib/R/library/utils/R-ex/citEntry.R
lib/R/library/utils/R-ex/citation.R
+lib/R/library/utils/R-ex/combn.R
lib/R/library/utils/R-ex/compareVersion.R
lib/R/library/utils/R-ex/data.R
lib/R/library/utils/R-ex/dataentry.R
@@ -8034,6 +8084,7 @@
lib/R/library/utils/R-ex/make.socket.R
lib/R/library/utils/R-ex/menu.R
lib/R/library/utils/R-ex/methods.R
+lib/R/library/utils/R-ex/modifyList.R
lib/R/library/utils/R-ex/normalizePath.R
lib/R/library/utils/R-ex/nsl.R
lib/R/library/utils/R-ex/object.size.R
@@ -8048,12 +8099,14 @@
lib/R/library/utils/R-ex/read.fortran.R
lib/R/library/utils/R-ex/read.fwf.R
lib/R/library/utils/R-ex/read.socket.R
+lib/R/library/utils/R-ex/readNEWS.R
lib/R/library/utils/R-ex/recover.R
lib/R/library/utils/R-ex/savehistory.R
lib/R/library/utils/R-ex/select.list.R
lib/R/library/utils/R-ex/sessionInfo.R
lib/R/library/utils/R-ex/str.R
lib/R/library/utils/R-ex/summaryRprof.R
+lib/R/library/utils/R-ex/tracemem.R
lib/R/library/utils/R-ex/update.packages.R
lib/R/library/utils/R-ex/url.show.R
lib/R/library/utils/R-ex/vignette.R
@@ -8071,6 +8124,7 @@
lib/R/library/utils/help/RHOME
lib/R/library/utils/help/RSiteSearch
lib/R/library/utils/help/Rprof
+lib/R/library/utils/help/Rprofmem
lib/R/library/utils/help/Rtangle
lib/R/library/utils/help/RweaveLatex
lib/R/library/utils/help/SHLIB
@@ -8088,6 +8142,7 @@
lib/R/library/utils/help/citEntry
lib/R/library/utils/help/citation
lib/R/library/utils/help/close.socket
+lib/R/library/utils/help/combn
lib/R/library/utils/help/compareVersion
lib/R/library/utils/help/data
lib/R/library/utils/help/dataentry
@@ -8114,9 +8169,11 @@
lib/R/library/utils/help/ls_str
lib/R/library/utils/help/make.packages.html
lib/R/library/utils/help/make.socket
+lib/R/library/utils/help/memory.size
lib/R/library/utils/help/menu
lib/R/library/utils/help/methods
lib/R/library/utils/help/mirrorAdmin
+lib/R/library/utils/help/modifyList
lib/R/library/utils/help/normalizePath
lib/R/library/utils/help/nsl
lib/R/library/utils/help/object.size
@@ -8128,9 +8185,11 @@
lib/R/library/utils/help/prompt
lib/R/library/utils/help/promptData
lib/R/library/utils/help/promptPackage
+lib/R/library/utils/help/read.DIF
lib/R/library/utils/help/read.fortran
lib/R/library/utils/help/read.fwf
lib/R/library/utils/help/read.socket
+lib/R/library/utils/help/readNEWS
lib/R/library/utils/help/recover
lib/R/library/utils/help/remove.packages
lib/R/library/utils/help/savehistory
@@ -8140,6 +8199,7 @@
lib/R/library/utils/help/str
lib/R/library/utils/help/summaryRprof
lib/R/library/utils/help/toLatex
+lib/R/library/utils/help/tracemem
lib/R/library/utils/help/update.packages
lib/R/library/utils/help/url.show
lib/R/library/utils/help/utils-defunct
@@ -8156,6 +8216,7 @@
lib/R/library/utils/html/RHOME.html
lib/R/library/utils/html/RSiteSearch.html
lib/R/library/utils/html/Rprof.html
+lib/R/library/utils/html/Rprofmem.html
lib/R/library/utils/html/Rtangle.html
lib/R/library/utils/html/RweaveLatex.html
lib/R/library/utils/html/SHLIB.html
@@ -8173,6 +8234,7 @@
lib/R/library/utils/html/citEntry.html
lib/R/library/utils/html/citation.html
lib/R/library/utils/html/close.socket.html
+lib/R/library/utils/html/combn.html
lib/R/library/utils/html/compareVersion.html
lib/R/library/utils/html/data.html
lib/R/library/utils/html/dataentry.html
@@ -8199,9 +8261,11 @@
lib/R/library/utils/html/ls_str.html
lib/R/library/utils/html/make.packages.html.html
lib/R/library/utils/html/make.socket.html
+lib/R/library/utils/html/memory.size.html
lib/R/library/utils/html/menu.html
lib/R/library/utils/html/methods.html
lib/R/library/utils/html/mirrorAdmin.html
+lib/R/library/utils/html/modifyList.html
lib/R/library/utils/html/normalizePath.html
lib/R/library/utils/html/nsl.html
lib/R/library/utils/html/object.size.html
@@ -8213,9 +8277,11 @@
lib/R/library/utils/html/prompt.html
lib/R/library/utils/html/promptData.html
lib/R/library/utils/html/promptPackage.html
+lib/R/library/utils/html/read.DIF.html
lib/R/library/utils/html/read.fortran.html
lib/R/library/utils/html/read.fwf.html
lib/R/library/utils/html/read.socket.html
+lib/R/library/utils/html/readNEWS.html
lib/R/library/utils/html/recover.html
lib/R/library/utils/html/remove.packages.html
lib/R/library/utils/html/savehistory.html
@@ -8225,6 +8291,7 @@
lib/R/library/utils/html/str.html
lib/R/library/utils/html/summaryRprof.html
lib/R/library/utils/html/toLatex.html
+lib/R/library/utils/html/tracemem.html
lib/R/library/utils/html/update.packages.html
lib/R/library/utils/html/url.show.html
lib/R/library/utils/html/utils-defunct.html
@@ -8241,6 +8308,7 @@
lib/R/library/utils/latex/RHOME.tex
lib/R/library/utils/latex/RSiteSearch.tex
lib/R/library/utils/latex/Rprof.tex
+lib/R/library/utils/latex/Rprofmem.tex
lib/R/library/utils/latex/Rtangle.tex
lib/R/library/utils/latex/RweaveLatex.tex
lib/R/library/utils/latex/SHLIB.tex
@@ -8258,6 +8326,7 @@
lib/R/library/utils/latex/citEntry.tex
lib/R/library/utils/latex/citation.tex
lib/R/library/utils/latex/close.socket.tex
+lib/R/library/utils/latex/combn.tex
lib/R/library/utils/latex/compareVersion.tex
lib/R/library/utils/latex/data.tex
lib/R/library/utils/latex/dataentry.tex
@@ -8284,9 +8353,11 @@
lib/R/library/utils/latex/ls_str.tex
lib/R/library/utils/latex/make.packages.html.tex
lib/R/library/utils/latex/make.socket.tex
+lib/R/library/utils/latex/memory.size.tex
lib/R/library/utils/latex/menu.tex
lib/R/library/utils/latex/methods.tex
lib/R/library/utils/latex/mirrorAdmin.tex
+lib/R/library/utils/latex/modifyList.tex
lib/R/library/utils/latex/normalizePath.tex
lib/R/library/utils/latex/nsl.tex
lib/R/library/utils/latex/object.size.tex
@@ -8298,9 +8369,11 @@
lib/R/library/utils/latex/prompt.tex
lib/R/library/utils/latex/promptData.tex
lib/R/library/utils/latex/promptPackage.tex
+lib/R/library/utils/latex/read.DIF.tex
lib/R/library/utils/latex/read.fortran.tex
lib/R/library/utils/latex/read.fwf.tex
lib/R/library/utils/latex/read.socket.tex
+lib/R/library/utils/latex/readNEWS.tex
lib/R/library/utils/latex/recover.tex
lib/R/library/utils/latex/remove.packages.tex
lib/R/library/utils/latex/savehistory.tex
@@ -8310,6 +8383,7 @@
lib/R/library/utils/latex/str.tex
lib/R/library/utils/latex/summaryRprof.tex
lib/R/library/utils/latex/toLatex.tex
+lib/R/library/utils/latex/tracemem.tex
lib/R/library/utils/latex/update.packages.tex
lib/R/library/utils/latex/url.show.tex
lib/R/library/utils/latex/utils-defunct.tex
@@ -8321,7 +8395,7 @@
lib/R/library/utils/po/fr/LC_MESSAGES/R-utils.mo
lib/R/library/utils/po/ko/LC_MESSAGES/R-utils.mo
lib/R/library/utils/po/zh_CN/LC_MESSAGES/R-utils.mo
-%%X11%%lib/R/modules/R_X11.so
+lib/R/modules/R_X11.so
lib/R/modules/internet.so
lib/R/modules/lapack.so
lib/R/modules/vfonts.so
@@ -8331,6 +8405,7 @@
lib/R/share/R/packloader.R
lib/R/share/encodings/Adobe-glyphlist
lib/R/share/encodings/character-sets
+lib/R/share/java/getsp.class
lib/R/share/licenses/Artistic
lib/R/share/licenses/BSD
lib/R/share/licenses/GPL-2
@@ -8428,6 +8503,9 @@
%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-intro.dvi
%%DOCSDIR%%/manual/R-intro.html
%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-intro.pdf
+%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-ints.dvi
+%%DOCSDIR%%/manual/R-ints.html
+%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-ints.pdf
%%DVI_MANUAL%%%%DOCSDIR%%/manual/R-lang.dvi
%%DOCSDIR%%/manual/R-lang.html
%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-lang.pdf
@@ -8440,6 +8518,8 @@
%%DVI_MANUAL%%%%DOCSDIR%%/manual/refman.dvi
%%PDF_MANUAL%%%%DOCSDIR%%/manual/refman.pdf
%%DVI_MANUAL%%@dirrm %%DOCSDIR%%/manual/images
+ at dirrm share/nls/en_US.US-ASCII
+ at dirrm share/nls/POSIX
@dirrm %%DOCSDIR%%/manual
@dirrm %%DOCSDIR%%/html/search
@dirrm %%DOCSDIR%%/html
@@ -8478,6 +8558,7 @@
@dirrm lib/R/share/locale/de
@dirrm lib/R/share/locale
@dirrm lib/R/share/licenses
+ at dirrm lib/R/share/java
@dirrm lib/R/share/encodings
@dirrm lib/R/share/R
@dirrm lib/R/share
@@ -8585,6 +8666,8 @@
@dirrm lib/R/library/stats4
@dirrm lib/R/library/stats/po/zh_CN/LC_MESSAGES
@dirrm lib/R/library/stats/po/zh_CN
+ at dirrm lib/R/library/stats/po/ru/LC_MESSAGES
+ at dirrm lib/R/library/stats/po/ru
@dirrm lib/R/library/stats/po/pt_BR/LC_MESSAGES
@dirrm lib/R/library/stats/po/pt_BR
@dirrm lib/R/library/stats/po/ko/LC_MESSAGES
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