ports/87276: [maintainer-update] new version of math/R

Eric van Gyzen eric at vangyzen.net
Tue Oct 11 19:40:18 UTC 2005


>Number:         87276
>Category:       ports
>Synopsis:       [maintainer-update] new version of math/R
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          maintainer-update
>Submitter-Id:   current-users
>Arrival-Date:   Tue Oct 11 19:40:15 GMT 2005
>Closed-Date:
>Last-Modified:
>Originator:     Eric van Gyzen
>Release:        FreeBSD 6.0-BETA4 i386
>Organization:
>Environment:
System: N/A

>Description:
new version of math/R

Note that the patches in the files/ directory are no longer necessary.

>How-To-Repeat:
N/A

>Fix:

Index: R/Makefile
===================================================================
RCS file: /freebsd/cvsroot/ports/math/R/Makefile,v
retrieving revision 1.46
diff -u -u -r1.46 Makefile
--- R/Makefile	10 Jul 2005 23:06:48 -0000	1.46
+++ R/Makefile	11 Oct 2005 00:13:08 -0000
@@ -1,14 +1,13 @@
-# ex: ts=8 sts=0 noet
-# New ports collection makefile for:	R
-# Date created:			Fri Feb  9 10:50:25 EST 2001
-# Whom:				Maurice Castro <maurice at serc.rmit.edu.au>
+# vim: tabstop=8 softtabstop=0 noexpandtab
+# Ports Makefile for:	R
+# Date created:		Fri Feb  9 10:50:25 EST 2001
+# Whom:			Maurice Castro <maurice at serc.rmit.edu.au>
 #
 # $FreeBSD: ports/math/R/Makefile,v 1.46 2005/07/10 23:06:48 pav Exp $
 #
 
 PORTNAME=	R
-PORTVERSION=	2.1.1
-PORTREVISION=	1
+PORTVERSION=	2.2.0
 CATEGORIES=	math lang
 MASTER_SITES=	http://cran.r-project.org/src/base/R-2/ \
 		ftp://cran.r-project.org/pub/R/src/base/R-2/ \
@@ -29,53 +28,123 @@
 		http://www.ibiblio.org/pub/languages/R/CRAN/src/base/R-2/ \
 		http://www.bioconductor.org/CRAN/src/base/R-2/
 
-MAINTAINER=	vangyzen at stat.duke.edu
+MAINTAINER=	eric+fbports at vangyzen.net
 COMMENT=	A language for statistical computing and graphics
 
-LIB_DEPENDS=	tcl84:${PORTSDIR}/lang/tcl84 \
-		tk84:${PORTSDIR}/x11-toolkits/tk84 \
-		jpeg.9:${PORTSDIR}/graphics/jpeg \
-		png.5:${PORTSDIR}/graphics/png \
-		pcre.0:${PORTSDIR}/devel/pcre
-
-.if defined(WITH_ATLAS)
-LIB_DEPENDS+=	f77blas.1:${PORTSDIR}/math/atlas
-CONFIGURE_ARGS=	--with-lapack="-lalapack -lcblas" --with-blas="-lf77blas"
-.else
-LIB_DEPENDS+=	lapack.3:${PORTSDIR}/math/lapack
-CONFIGURE_ARGS=	--with-lapack="-llapack" --with-blas="-lblas"
-.endif
+OPTIONS=	ATLAS        "Use ATLAS instead of BLAS/LAPACK"           off \
+		TCLTK        "Use Tcl/Tk (for the tcltk package)"         on  \
+		JPEG         "Enable the jpeg() graphics device"          on  \
+		PNG          "Enable the png() graphics device"           on  \
+		X11          "Enable the X11() graphics device"           on  \
+		GHOSTSCRIPT  "Enable the [dev2]bitmap() graphics devices" on  \
+		PCRE_PORT    "Use PCRE port instead of bundled source"    on  \
+		DVI_MANUALS  "Install DVI manuals (requires TeX)"         off \
+		PDF_MANUALS  "Install PDF manuals (requires TeX)"         on  \
+		INFO_MANUALS "Install GNU info manuals"                   on  \
+		LETTER_PAPER "Use US Letter paper"                        off
 
 MAN1=		R.1
 
+INSTALLS_SHLIB=	yes
+INSTALL_TARGET=	install install-libR
+ALL_TARGET=	all
 GNU_CONFIGURE=	yes
 USE_GETTEXT=	yes
-USE_XLIB=	yes
+USE_ICONV=	yes
 USE_PERL5=	yes
+
 CONFIGURE_ENV=	FFLAGS="${FFLAGS}" \
 		INSTALL_DATA="${INSTALL} ${COPY} ${_SHROWNGRP} -m 644"
-CONFIGURE_ARGS+=--enable-R-shlib --with-bzlib --with-pcre --with-zlib
+CONFIGURE_ARGS=	--enable-R-shlib --with-system-bzlib --with-system-zlib \
+		rdocdir=${PREFIX}/share/doc/R
 
-pre-fetch:
-.if !defined(PAPERSIZE)
-	@${ECHO}
-	@${ECHO} "    The default paper size for printing from R is A4."
-	@${ECHO} "    You can change it by setting the PAPERSIZE"
-	@${ECHO} "    make variable to one of:"
-	@${ECHO} "        a4 letter legal executive"
-	@${ECHO} "    For example:"
-	@${ECHO} "        # make PAPERSIZE=letter install clean"
-	@${ECHO}
-.else
-CONFIGURE_ENV+=	R_PAPERSIZE=${PAPERSIZE}
-.endif
+.include <bsd.port.pre.mk>
 
 test check: build
 	@(cd ${WRKSRC}; ${MAKE} check)
 check-all: build
 	@(cd ${WRKSRC}; ${MAKE} check-all)
 
-.include <bsd.port.pre.mk>
+.if defined(WITH_ATLAS)
+LIB_DEPENDS+=	f77blas.1:${PORTSDIR}/math/atlas
+CONFIGURE_ARGS+=--with-lapack="-lalapack -lcblas" --with-blas="-lf77blas"
+.else
+LIB_DEPENDS+=	blas.1:${PORTSDIR}/math/blas
+CONFIGURE_ARGS+=--with-blas="-lblas"
+.endif
+
+.if defined(WITHOUT_TCLTK)
+CONFIGURE_ARGS+=--without-tcltk
+.else
+LIB_DEPENDS+=	tcl84:${PORTSDIR}/lang/tcl84 \
+		tk84:${PORTSDIR}/x11-toolkits/tk84
+CONFIGURE_ARGS+=--with-tcltk
+.endif
+
+.if defined(WITHOUT_JPEG)
+CONFIGURE_ARGS+=--without-jpeglib
+.else
+LIB_DEPENDS+=	jpeg.9:${PORTSDIR}/graphics/jpeg
+CONFIGURE_ARGS+=--with-jpeglib
+.endif
+
+.if defined(WITHOUT_PNG)
+CONFIGURE_ARGS+=--without-libpng
+.else
+LIB_DEPENDS+=	png.5:${PORTSDIR}/graphics/png
+CONFIGURE_ARGS+=--with-libpng
+.endif
+
+.if defined(WITHOUT_X11)
+CONFIGURE_ARGS+=--without-x
+.else
+CONFIGURE_ARGS+=--with-x
+USE_XLIB=	yes
+.endif
+
+.if !defined(WITHOUT_GHOSTSCRIPT)
+USE_GHOSTSCRIPT_RUN=yes
+.endif
+
+.if defined(WITHOUT_PCRE_PORT)
+CONFIGURE_ARGS+=--without-system-pcre
+.else
+LIB_DEPENDS+=	pcre.0:${PORTSDIR}/devel/pcre
+CONFIGURE_ARGS+=--with-system-pcre
+.endif
+
+.if defined(WITH_DVI_MANUALS)
+BUILD_DEPENDS+=	pdflatex:${PORTSDIR}/print/teTeX-base
+ALL_TARGET+=	dvi
+INSTALL_TARGET+=install-dvi
+PLIST_SUB+=	DVI_MANUAL=''
+.else
+PLIST_SUB+=	DVI_MANUAL='@comment '
+.endif
+
+.if defined(WITHOUT_PDF_MANUALS)
+PLIST_SUB+=	PDF_MANUAL='@comment '
+.else
+PLIST_SUB+=	PDF_MANUAL=''
+BUILD_DEPENDS+=	pdflatex:${PORTSDIR}/print/teTeX-base
+ALL_TARGET+=	pdf
+INSTALL_TARGET+=install-pdf
+.endif
+
+.if !defined(WITHOUT_INFO_MANUALS)
+ALL_TARGET+=	info
+INFO=		R-FAQ R-admin R-data R-exts R-intro R-lang
+
+post-install:
+	(cd ${WRKSRC}/doc/manual; \
+	for infofile in ${INFO}; do \
+		${INSTALL_DATA} $${infofile}.info* ${PREFIX}/${INFO_PATH}/; \
+	done)
+.endif
+
+.if defined(WITH_LETTER_PAPER)
+CONFIGURE_ENV+=	R_PAPERSIZE=letter
+.endif
 
 .if ${OSVERSION} < 500000
 CONFIGURE_ARGS+=	--disable-mbcs
Index: R/distinfo
===================================================================
RCS file: /freebsd/cvsroot/ports/math/R/distinfo,v
retrieving revision 1.24
diff -u -u -r1.24 distinfo
--- R/distinfo	3 Jul 2005 16:45:58 -0000	1.24
+++ R/distinfo	8 Oct 2005 02:09:15 -0000
@@ -1,2 +1,2 @@
-MD5 (R-2.1.1.tar.gz) = e755b0ba5851ec261000af6b5c510335
-SIZE (R-2.1.1.tar.gz) = 12644376
+MD5 (R-2.2.0.tar.gz) = 6bddf439ae417a48bd31892996ea111c
+SIZE (R-2.2.0.tar.gz) = 13307492
Index: R/pkg-descr
===================================================================
RCS file: /freebsd/cvsroot/ports/math/R/pkg-descr,v
retrieving revision 1.5
diff -u -u -r1.5 pkg-descr
--- R/pkg-descr	31 Oct 2003 00:59:37 -0000	1.5
+++ R/pkg-descr	9 Oct 2005 21:00:28 -0000
@@ -1,22 +1,20 @@
-From <http://www.R-project.org/about.html>:
+From <http://cran.R-project.org/doc/FAQ/R-FAQ.html#What-is-R_003f>:
 
-    R is a language and environment for statistical computing and graphics.
-    It is a GNU project which is similar to the S language and environment
-    which was developed at Bell Laboratories (formerly AT&T, now Lucent
-    Technologies) by John Chambers and colleagues. R can be considered as a
-    different implementation of S. There are some important differences,
-    but much code written for S runs unaltered under R. 
+R is a system for statistical computation and graphics. It consists of
+a language plus a run-time environment with graphics, a debugger,
+access to certain system functions, and the ability to run programs
+stored in script files.
 
-    R provides a wide variety of statistical (linear and nonlinear modelling,
-    classical statistical tests, time-series analysis, classification,
-    clustering, ...) and graphical techniques, and is highly extensible.
-    The S language is often the vehicle of choice for research in statistical
-    methodology, and R provides an Open Source route to participation in that
-    activity. 
-
-    One of R's strengths is the ease with which well-designed
-    publication-quality plots can be produced, including mathematical symbols
-    and formulae where needed. Great care has been taken over the defaults for
-    the minor design choices in graphics, but the user retains full control. 
+The core of R is an interpreted computer language which allows branching
+and looping as well as modular programming using functions.  Most of the
+user-visible functions in R are written in R. It is possible for the user
+to interface to procedures written in the C, C++, or FORTRAN languages
+for efficiency. The R distribution contains functionality for a large
+number of statistical procedures. Among these are: linear and generalized
+linear models, nonlinear regression models, time series analysis, classical
+parametric and nonparametric tests, clustering and smoothing. There is also
+a large set of functions which provide a flexible graphical environment for
+creating various kinds of data presentations. Additional modules ("add-on
+packages") are available for a variety of specific purposes.
 
 WWW: http://www.R-project.org/
Index: R/pkg-plist
===================================================================
RCS file: /freebsd/cvsroot/ports/math/R/pkg-plist,v
retrieving revision 1.27
diff -u -u -r1.27 pkg-plist
--- R/pkg-plist	7 Jul 2005 18:01:24 -0000	1.27
+++ R/pkg-plist	10 Oct 2005 23:50:13 -0000
@@ -5,8 +5,8 @@
 lib/R/COPYRIGHTS
 lib/R/FAQ
 lib/R/NEWS
-lib/R/ONEWS
 lib/R/RESOURCES
+lib/R/SVN-REVISION
 lib/R/THANKS
 lib/R/bin/BATCH
 lib/R/bin/COMPILE
@@ -31,39 +31,6 @@
 lib/R/bin/mkinstalldirs
 lib/R/bin/pager
 lib/R/bin/texi2dvi
-lib/R/doc/CRAN_mirrors.csv
-lib/R/doc/KEYWORDS
-lib/R/doc/KEYWORDS.db
-lib/R/doc/html/R.css
-lib/R/doc/html/about.html
-lib/R/doc/html/index.html
-lib/R/doc/html/left.jpg
-lib/R/doc/html/logo.jpg
-lib/R/doc/html/logosm.jpg
-lib/R/doc/html/packages-head.html
-lib/R/doc/html/packages.html
-lib/R/doc/html/resources.html
-lib/R/doc/html/right.jpg
-lib/R/doc/html/search/IndexEntry.class
-lib/R/doc/html/search/IndexStream.class
-lib/R/doc/html/search/IndexTable.class
-lib/R/doc/html/search/SearchEngine-foot.html
-lib/R/doc/html/search/SearchEngine-head.html
-lib/R/doc/html/search/SearchEngine.class
-lib/R/doc/html/search/SearchEngine.html
-lib/R/doc/html/search/SearchObject.html
-lib/R/doc/html/search/Tracer.class
-lib/R/doc/html/search/Value.class
-lib/R/doc/html/search/index.txt
-lib/R/doc/html/template.html
-lib/R/doc/html/thanks.html
-lib/R/doc/html/up.jpg
-lib/R/doc/manual/R-FAQ.html
-lib/R/doc/manual/R-admin.html
-lib/R/doc/manual/R-data.html
-lib/R/doc/manual/R-exts.html
-lib/R/doc/manual/R-intro.html
-lib/R/doc/manual/R-lang.html
 lib/R/etc/Makeconf
 lib/R/etc/Renviron
 lib/R/etc/repositories
@@ -106,6 +73,7 @@
 lib/R/include/Rversion.h
 lib/R/include/S.h
 lib/R/lib/libR.so
+lib/R/lib/libRlapack.so
 lib/R/library/KernSmooth/CONTENTS
 lib/R/library/KernSmooth/DESCRIPTION
 lib/R/library/KernSmooth/INDEX
@@ -715,7 +683,6 @@
 lib/R/library/MASS/libs/MASS.so
 lib/R/library/MASS/man/MASS.Rd.gz
 lib/R/library/MASS/po/en at quot/LC_MESSAGES/R-MASS.mo
-lib/R/library/MASS/scripts/README
 lib/R/library/MASS/scripts/ch01.R
 lib/R/library/MASS/scripts/ch02.R
 lib/R/library/MASS/scripts/ch03.R
@@ -829,7 +796,6 @@
 lib/R/library/base/R-ex/data.matrix.R
 lib/R/library/base/R-ex/date.R
 lib/R/library/base/R-ex/dcf.R
-lib/R/library/base/R-ex/delay.R
 lib/R/library/base/R-ex/delayedAssign.R
 lib/R/library/base/R-ex/deparse.R
 lib/R/library/base/R-ex/det.R
@@ -865,6 +831,7 @@
 lib/R/library/base/R-ex/format.Date.R
 lib/R/library/base/R-ex/format.R
 lib/R/library/base/R-ex/format.info.R
+lib/R/library/base/R-ex/format.pval.R
 lib/R/library/base/R-ex/formatDL.R
 lib/R/library/base/R-ex/formatc.R
 lib/R/library/base/R-ex/function.R
@@ -883,6 +850,7 @@
 lib/R/library/base/R-ex/grep.R
 lib/R/library/base/R-ex/groupGeneric.R
 lib/R/library/base/R-ex/gzcon.R
+lib/R/library/base/R-ex/iconv.R
 lib/R/library/base/R-ex/identical.R
 lib/R/library/base/R-ex/ifelse.R
 lib/R/library/base/R-ex/integer.R
@@ -972,6 +940,7 @@
 lib/R/library/base/R-ex/raw.R
 lib/R/library/base/R-ex/rawConversion.R
 lib/R/library/base/R-ex/readBin.R
+lib/R/library/base/R-ex/readChar.R
 lib/R/library/base/R-ex/readLines.R
 lib/R/library/base/R-ex/readline.R
 lib/R/library/base/R-ex/reg.finalizer.R
@@ -1087,6 +1056,7 @@
 lib/R/library/base/help/Memory-limits
 lib/R/library/base/help/NA
 lib/R/library/base/help/NULL
+lib/R/library/base/help/NumericConstants
 lib/R/library/base/help/Paren
 lib/R/library/base/help/Platform
 lib/R/library/base/help/Primitive
@@ -1132,6 +1102,7 @@
 lib/R/library/base/help/base-defunct
 lib/R/library/base/help/base-deprecated
 lib/R/library/base/help/base-internal
+lib/R/library/base/help/base-package
 lib/R/library/base/help/basename
 lib/R/library/base/help/bindenv
 lib/R/library/base/help/body
@@ -1175,7 +1146,6 @@
 lib/R/library/base/help/date
 lib/R/library/base/help/dcf
 lib/R/library/base/help/debug
-lib/R/library/base/help/delay
 lib/R/library/base/help/delayedAssign
 lib/R/library/base/help/deparse
 lib/R/library/base/help/deparseOpts
@@ -1215,6 +1185,7 @@
 lib/R/library/base/help/format
 lib/R/library/base/help/format.Date
 lib/R/library/base/help/format.info
+lib/R/library/base/help/format.pval
 lib/R/library/base/help/formatDL
 lib/R/library/base/help/formatc
 lib/R/library/base/help/function
@@ -1234,6 +1205,7 @@
 lib/R/library/base/help/grep
 lib/R/library/base/help/groupGeneric
 lib/R/library/base/help/gzcon
+lib/R/library/base/help/iconv
 lib/R/library/base/help/identical
 lib/R/library/base/help/ifelse
 lib/R/library/base/help/integer
@@ -1336,6 +1308,7 @@
 lib/R/library/base/help/rawConversion
 lib/R/library/base/help/read.table
 lib/R/library/base/help/readBin
+lib/R/library/base/help/readChar
 lib/R/library/base/help/readLines
 lib/R/library/base/help/readline
 lib/R/library/base/help/real
@@ -1419,6 +1392,7 @@
 lib/R/library/base/help/unlist
 lib/R/library/base/help/unname
 lib/R/library/base/help/userhooks
+lib/R/library/base/help/utf8Conversion
 lib/R/library/base/help/vector
 lib/R/library/base/help/warning
 lib/R/library/base/help/warnings
@@ -1461,6 +1435,7 @@
 lib/R/library/base/html/Memory.html
 lib/R/library/base/html/NA.html
 lib/R/library/base/html/NULL.html
+lib/R/library/base/html/NumericConstants.html
 lib/R/library/base/html/Paren.html
 lib/R/library/base/html/Platform.html
 lib/R/library/base/html/Primitive.html
@@ -1506,6 +1481,7 @@
 lib/R/library/base/html/base-defunct.html
 lib/R/library/base/html/base-deprecated.html
 lib/R/library/base/html/base-internal.html
+lib/R/library/base/html/base-package.html
 lib/R/library/base/html/basename.html
 lib/R/library/base/html/bindenv.html
 lib/R/library/base/html/body.html
@@ -1549,7 +1525,6 @@
 lib/R/library/base/html/date.html
 lib/R/library/base/html/dcf.html
 lib/R/library/base/html/debug.html
-lib/R/library/base/html/delay.html
 lib/R/library/base/html/delayedAssign.html
 lib/R/library/base/html/deparse.html
 lib/R/library/base/html/deparseOpts.html
@@ -1589,6 +1564,7 @@
 lib/R/library/base/html/format.Date.html
 lib/R/library/base/html/format.html
 lib/R/library/base/html/format.info.html
+lib/R/library/base/html/format.pval.html
 lib/R/library/base/html/formatDL.html
 lib/R/library/base/html/formatc.html
 lib/R/library/base/html/function.html
@@ -1608,6 +1584,7 @@
 lib/R/library/base/html/grep.html
 lib/R/library/base/html/groupGeneric.html
 lib/R/library/base/html/gzcon.html
+lib/R/library/base/html/iconv.html
 lib/R/library/base/html/identical.html
 lib/R/library/base/html/ifelse.html
 lib/R/library/base/html/integer.html
@@ -1710,6 +1687,7 @@
 lib/R/library/base/html/rawConversion.html
 lib/R/library/base/html/read.table.html
 lib/R/library/base/html/readBin.html
+lib/R/library/base/html/readChar.html
 lib/R/library/base/html/readLines.html
 lib/R/library/base/html/readline.html
 lib/R/library/base/html/real.html
@@ -1793,6 +1771,7 @@
 lib/R/library/base/html/unlist.html
 lib/R/library/base/html/unname.html
 lib/R/library/base/html/userhooks.html
+lib/R/library/base/html/utf8Conversion.html
 lib/R/library/base/html/vector.html
 lib/R/library/base/html/warning.html
 lib/R/library/base/html/warnings.html
@@ -1834,6 +1813,7 @@
 lib/R/library/base/latex/Memory.tex
 lib/R/library/base/latex/NA.tex
 lib/R/library/base/latex/NULL.tex
+lib/R/library/base/latex/NumericConstants.tex
 lib/R/library/base/latex/Paren.tex
 lib/R/library/base/latex/Platform.tex
 lib/R/library/base/latex/Primitive.tex
@@ -1879,6 +1859,7 @@
 lib/R/library/base/latex/base-defunct.tex
 lib/R/library/base/latex/base-deprecated.tex
 lib/R/library/base/latex/base-internal.tex
+lib/R/library/base/latex/base-package.tex
 lib/R/library/base/latex/basename.tex
 lib/R/library/base/latex/bindenv.tex
 lib/R/library/base/latex/body.tex
@@ -1922,7 +1903,6 @@
 lib/R/library/base/latex/date.tex
 lib/R/library/base/latex/dcf.tex
 lib/R/library/base/latex/debug.tex
-lib/R/library/base/latex/delay.tex
 lib/R/library/base/latex/delayedAssign.tex
 lib/R/library/base/latex/deparse.tex
 lib/R/library/base/latex/deparseOpts.tex
@@ -1961,6 +1941,7 @@
 lib/R/library/base/latex/formals.tex
 lib/R/library/base/latex/format.Date.tex
 lib/R/library/base/latex/format.info.tex
+lib/R/library/base/latex/format.pval.tex
 lib/R/library/base/latex/format.tex
 lib/R/library/base/latex/formatDL.tex
 lib/R/library/base/latex/formatc.tex
@@ -1981,6 +1962,7 @@
 lib/R/library/base/latex/grep.tex
 lib/R/library/base/latex/groupGeneric.tex
 lib/R/library/base/latex/gzcon.tex
+lib/R/library/base/latex/iconv.tex
 lib/R/library/base/latex/identical.tex
 lib/R/library/base/latex/ifelse.tex
 lib/R/library/base/latex/integer.tex
@@ -2083,6 +2065,7 @@
 lib/R/library/base/latex/rawConversion.tex
 lib/R/library/base/latex/read.table.tex
 lib/R/library/base/latex/readBin.tex
+lib/R/library/base/latex/readChar.tex
 lib/R/library/base/latex/readLines.tex
 lib/R/library/base/latex/readline.tex
 lib/R/library/base/latex/real.tex
@@ -2166,6 +2149,7 @@
 lib/R/library/base/latex/unlist.tex
 lib/R/library/base/latex/unname.tex
 lib/R/library/base/latex/userhooks.tex
+lib/R/library/base/latex/utf8Conversion.tex
 lib/R/library/base/latex/vector.tex
 lib/R/library/base/latex/warning.tex
 lib/R/library/base/latex/warnings.tex
@@ -2188,6 +2172,7 @@
 lib/R/library/base/po/it/LC_MESSAGES/R-base.mo
 lib/R/library/base/po/ja/LC_MESSAGES/R-base.mo
 lib/R/library/base/po/ko/LC_MESSAGES/R-base.mo
+lib/R/library/base/po/pt_BR/LC_MESSAGES/R-base.mo
 lib/R/library/base/po/zh_CN/LC_MESSAGES/R-base.mo
 lib/R/library/boot/CONTENTS
 lib/R/library/boot/DESCRIPTION
@@ -2910,6 +2895,7 @@
 lib/R/library/datasets/help/cars
 lib/R/library/datasets/help/chickwts
 lib/R/library/datasets/help/co2
+lib/R/library/datasets/help/datasets-package
 lib/R/library/datasets/help/discoveries
 lib/R/library/datasets/help/esoph
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@@ -2994,6 +2980,7 @@
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+lib/R/library/datasets/html/datasets-package.html
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@@ -3077,6 +3064,7 @@
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+lib/R/library/datasets/latex/datasets-package.tex
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@@ -3226,7 +3219,10 @@
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+lib/R/library/grDevices/help/boxplot.stats
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+lib/R/library/grDevices/help/contourLines
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+lib/R/library/grDevices/help/extendrange
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+lib/R/library/utils/help/glob2rx
 lib/R/library/utils/help/head
 lib/R/library/utils/help/help
 lib/R/library/utils/help/help.search
 lib/R/library/utils/help/help.start
-lib/R/library/utils/help/iconv
 lib/R/library/utils/help/index.search
 lib/R/library/utils/help/installed.packages
 lib/R/library/utils/help/localeToCharset
@@ -7890,6 +7972,7 @@
 lib/R/library/utils/help/person
 lib/R/library/utils/help/prompt
 lib/R/library/utils/help/promptData
+lib/R/library/utils/help/promptPackage
 lib/R/library/utils/help/read.fortran
 lib/R/library/utils/help/read.fwf
 lib/R/library/utils/help/read.socket
@@ -7906,6 +7989,7 @@
 lib/R/library/utils/help/url.show
 lib/R/library/utils/help/utils-defunct
 lib/R/library/utils/help/utils-deprecated
+lib/R/library/utils/help/utils-package
 lib/R/library/utils/help/vignette
 lib/R/library/utils/html/00Index.html
 lib/R/library/utils/html/BATCH.html
@@ -7923,6 +8007,7 @@
 lib/R/library/utils/html/Sweave.html
 lib/R/library/utils/html/SweaveSyntConv.html
 lib/R/library/utils/html/SweaveUtils.html
+lib/R/library/utils/html/URLencode.html
 lib/R/library/utils/html/alarm.html
 lib/R/library/utils/html/apropos.html
 lib/R/library/utils/html/browseEnv.html
@@ -7948,11 +8033,11 @@
 lib/R/library/utils/html/getAnywhere.html
 lib/R/library/utils/html/getFromNamespace.html
 lib/R/library/utils/html/getS3method.html
+lib/R/library/utils/html/glob2rx.html
 lib/R/library/utils/html/head.html
 lib/R/library/utils/html/help.html
 lib/R/library/utils/html/help.search.html
 lib/R/library/utils/html/help.start.html
-lib/R/library/utils/html/iconv.html
 lib/R/library/utils/html/index.search.html
 lib/R/library/utils/html/installed.packages.html
 lib/R/library/utils/html/localeToCharset.html
@@ -7972,6 +8057,7 @@
 lib/R/library/utils/html/person.html
 lib/R/library/utils/html/prompt.html
 lib/R/library/utils/html/promptData.html
+lib/R/library/utils/html/promptPackage.html
 lib/R/library/utils/html/read.fortran.html
 lib/R/library/utils/html/read.fwf.html
 lib/R/library/utils/html/read.socket.html
@@ -7988,6 +8074,7 @@
 lib/R/library/utils/html/url.show.html
 lib/R/library/utils/html/utils-defunct.html
 lib/R/library/utils/html/utils-deprecated.html
+lib/R/library/utils/html/utils-package.html
 lib/R/library/utils/html/vignette.html
 lib/R/library/utils/iconvlist
 lib/R/library/utils/latex/BATCH.tex
@@ -8005,6 +8092,7 @@
 lib/R/library/utils/latex/Sweave.tex
 lib/R/library/utils/latex/SweaveSyntConv.tex
 lib/R/library/utils/latex/SweaveUtils.tex
+lib/R/library/utils/latex/URLencode.tex
 lib/R/library/utils/latex/alarm.tex
 lib/R/library/utils/latex/apropos.tex
 lib/R/library/utils/latex/browseEnv.tex
@@ -8030,11 +8118,11 @@
 lib/R/library/utils/latex/getAnywhere.tex
 lib/R/library/utils/latex/getFromNamespace.tex
 lib/R/library/utils/latex/getS3method.tex
+lib/R/library/utils/latex/glob2rx.tex
 lib/R/library/utils/latex/head.tex
 lib/R/library/utils/latex/help.search.tex
 lib/R/library/utils/latex/help.start.tex
 lib/R/library/utils/latex/help.tex
-lib/R/library/utils/latex/iconv.tex
 lib/R/library/utils/latex/index.search.tex
 lib/R/library/utils/latex/installed.packages.tex
 lib/R/library/utils/latex/localeToCharset.tex
@@ -8054,6 +8142,7 @@
 lib/R/library/utils/latex/person.tex
 lib/R/library/utils/latex/prompt.tex
 lib/R/library/utils/latex/promptData.tex
+lib/R/library/utils/latex/promptPackage.tex
 lib/R/library/utils/latex/read.fortran.tex
 lib/R/library/utils/latex/read.fwf.tex
 lib/R/library/utils/latex/read.socket.tex
@@ -8070,6 +8159,7 @@
 lib/R/library/utils/latex/url.show.tex
 lib/R/library/utils/latex/utils-defunct.tex
 lib/R/library/utils/latex/utils-deprecated.tex
+lib/R/library/utils/latex/utils-package.tex
 lib/R/library/utils/latex/vignette.tex
 lib/R/library/utils/man/utils.Rd.gz
 lib/R/library/utils/po/en at quot/LC_MESSAGES/R-utils.mo
@@ -8082,6 +8172,7 @@
 lib/R/share/R/nspackloader.R
 lib/R/share/R/nsrdaload.R
 lib/R/share/R/packloader.R
+lib/R/share/encodings/character-sets
 lib/R/share/licenses/Artistic
 lib/R/share/licenses/BSD
 lib/R/share/licenses/GPL-2
@@ -8098,6 +8189,7 @@
 lib/R/share/locale/pt_BR/LC_MESSAGES/R.mo
 lib/R/share/locale/ru/LC_MESSAGES/R.mo
 lib/R/share/locale/zh_CN/LC_MESSAGES/R.mo
+lib/R/share/locale/zh_TW/LC_MESSAGES/R.mo
 lib/R/share/make/check.mk
 lib/R/share/make/config.mk
 lib/R/share/make/shlib.mk
@@ -8127,12 +8219,74 @@
 lib/R/share/texmf/ts1aer.fd
 lib/R/share/texmf/ts1aett.fd
 lib/R/share/texmf/upquote.sty
+lib/libR.so
+share/doc/R/CRAN_mirrors.csv
+share/doc/R/KEYWORDS
+share/doc/R/KEYWORDS.db
+share/doc/R/html/R.css
+share/doc/R/html/about.html
+share/doc/R/html/index.html
+share/doc/R/html/left.jpg
+share/doc/R/html/logo.jpg
+share/doc/R/html/logosm.jpg
+share/doc/R/html/packages-head-utf8.html
+share/doc/R/html/packages-head.html
+share/doc/R/html/packages.html
+share/doc/R/html/resources.html
+share/doc/R/html/right.jpg
+share/doc/R/html/search/IndexEntry.class
+share/doc/R/html/search/IndexStream.class
+share/doc/R/html/search/IndexTable.class
+share/doc/R/html/search/SearchEngine-foot.html
+share/doc/R/html/search/SearchEngine-head.html
+share/doc/R/html/search/SearchEngine.class
+share/doc/R/html/search/SearchEngine.html
+share/doc/R/html/search/SearchObject.html
+share/doc/R/html/search/Tracer.class
+share/doc/R/html/search/Value.class
+share/doc/R/html/search/index.txt
+share/doc/R/html/template.html
+share/doc/R/html/thanks.html
+share/doc/R/html/up.jpg
+%%DVI_MANUAL%%share/doc/R/manual/R-FAQ.dvi
+share/doc/R/manual/R-FAQ.html
+%%PDF_MANUAL%%share/doc/R/manual/R-FAQ.pdf
+%%DVI_MANUAL%%share/doc/R/manual/R-admin.dvi
+share/doc/R/manual/R-admin.html
+%%PDF_MANUAL%%share/doc/R/manual/R-admin.pdf
+%%DVI_MANUAL%%share/doc/R/manual/R-data.dvi
+share/doc/R/manual/R-data.html
+%%PDF_MANUAL%%share/doc/R/manual/R-data.pdf
+%%DVI_MANUAL%%share/doc/R/manual/R-exts.dvi
+share/doc/R/manual/R-exts.html
+%%PDF_MANUAL%%share/doc/R/manual/R-exts.pdf
+%%DVI_MANUAL%%share/doc/R/manual/R-intro.dvi
+share/doc/R/manual/R-intro.html
+%%PDF_MANUAL%%share/doc/R/manual/R-intro.pdf
+%%DVI_MANUAL%%share/doc/R/manual/R-lang.dvi
+share/doc/R/manual/R-lang.html
+%%PDF_MANUAL%%share/doc/R/manual/R-lang.pdf
+%%DVI_MANUAL%%share/doc/R/manual/images/QQ.eps
+%%DVI_MANUAL%%share/doc/R/manual/images/ecdf.eps
+%%DVI_MANUAL%%share/doc/R/manual/images/fig11.eps
+%%DVI_MANUAL%%share/doc/R/manual/images/fig12.eps
+%%DVI_MANUAL%%share/doc/R/manual/images/hist.eps
+%%DVI_MANUAL%%share/doc/R/manual/images/ice.eps
+%%DVI_MANUAL%%share/doc/R/manual/refman.dvi
+%%PDF_MANUAL%%share/doc/R/manual/refman.pdf
+%%DVI_MANUAL%%@dirrm share/doc/R/manual/images
+ at dirrm share/doc/R/manual
+ at dirrm share/doc/R/html/search
+ at dirrm share/doc/R/html
+ at dirrm share/doc/R
 @dirrm lib/R/share/texmf
 @dirrm lib/R/share/sh
 @dirrm lib/R/share/perl/Text
 @dirrm lib/R/share/perl/R
 @dirrm lib/R/share/perl
 @dirrm lib/R/share/make
+ at dirrm lib/R/share/locale/zh_TW/LC_MESSAGES
+ at dirrm lib/R/share/locale/zh_TW
 @dirrm lib/R/share/locale/zh_CN/LC_MESSAGES
 @dirrm lib/R/share/locale/zh_CN
 @dirrm lib/R/share/locale/ru/LC_MESSAGES
@@ -8157,6 +8311,7 @@
 @dirrm lib/R/share/locale/de
 @dirrm lib/R/share/locale
 @dirrm lib/R/share/licenses
+ at dirrm lib/R/share/encodings
 @dirrm lib/R/share/R
 @dirrm lib/R/share
 @dirrm lib/R/modules
@@ -8247,6 +8402,8 @@
 @dirrm lib/R/library/stats4
 @dirrm lib/R/library/stats/po/zh_CN/LC_MESSAGES
 @dirrm lib/R/library/stats/po/zh_CN
+ at dirrm lib/R/library/stats/po/pt_BR/LC_MESSAGES
+ at dirrm lib/R/library/stats/po/pt_BR
 @dirrm lib/R/library/stats/po/ko/LC_MESSAGES
 @dirrm lib/R/library/stats/po/ko
 @dirrm lib/R/library/stats/po/ja/LC_MESSAGES
@@ -8341,6 +8498,8 @@
 @dirrm lib/R/library/mgcv/R
 @dirrm lib/R/library/mgcv/Meta
 @dirrm lib/R/library/mgcv
+ at dirrm lib/R/library/methods/po/zh_CN/LC_MESSAGES
+ at dirrm lib/R/library/methods/po/zh_CN
 @dirrm lib/R/library/methods/po/ko/LC_MESSAGES
 @dirrm lib/R/library/methods/po/ko
 @dirrm lib/R/library/methods/po/en at quot/LC_MESSAGES
@@ -8476,6 +8635,8 @@
 @dirrm lib/R/library/boot
 @dirrm lib/R/library/base/po/zh_CN/LC_MESSAGES
 @dirrm lib/R/library/base/po/zh_CN
+ at dirrm lib/R/library/base/po/pt_BR/LC_MESSAGES
+ at dirrm lib/R/library/base/po/pt_BR
 @dirrm lib/R/library/base/po/ko/LC_MESSAGES
 @dirrm lib/R/library/base/po/ko
 @dirrm lib/R/library/base/po/ja/LC_MESSAGES
@@ -8524,10 +8685,6 @@
 @dirrm lib/R/include/R_ext
 @dirrm lib/R/include
 @dirrm lib/R/etc
- at dirrm lib/R/doc/manual
- at dirrm lib/R/doc/html/search
- at dirrm lib/R/doc/html
- at dirrm lib/R/doc
 @dirrm lib/R/bin/exec
 @dirrm lib/R/bin
 @dirrm lib/R
>Release-Note:
>Audit-Trail:
>Unformatted:



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