ports/68199: fix biology/fasta3 and take maintainership
fernan at iib.unsam.edu.ar
Tue Jun 22 13:31:30 UTC 2004
>Synopsis: fix biology/fasta3 and take maintainership
>Arrival-Date: Tue Jun 22 13:30:23 GMT 2004
>Originator: Fernan Aguero
>Release: FreeBSD 4.10-RELEASE i386
FreeBSD pi.iib.unsam.edu.ar 4.10-RELEASE FreeBSD 4.10-RELEASE #0: Wed May 26 12:56:43 ART 2004 fernan at pi.iib.unsam.edu.ar:/usr/obj/usr/src/sys/PI i386
biology/fasta3 was marked as BROKEN due to a checksum mismatch.
It is now scheduled for removal on August 20.
I am now fixing the build problems and asking for
maintainership of the port. Johann (the current maintainer) has
not been very active lately and he already has agreed on me
taking maintainership of other biology/ ports (p5-bioperl,
emboss (which BTW I still have to finish)).
Although there are new versions of fasta3 (see
ftp://ftp.virginia.edu/pub/fasta/), in this PR I am just fixing
the problems with fasta33t08d4.
I don't know what could have changed in the files, since the
version has remained the same ... so the answer about the change
in checksum is: I really don't know what caused the checksum
mismatch. I've checked the pkg-plist and nothing new is
installed ... so to fix it I just went to
fasta33t08d4.shar.Z and updated the distinfo file accordingly.
Now everything builds and installs fine.
I hope this is enough to save the port.
I am planning to update it soon to the latest version
(fasta34t24b1). But that will be in another PR :)
--- Makefile.diff begins here ---
--- /usr/ports/biology/fasta3/Makefile Sat Feb 28 01:03:30 2004
+++ Makefile Tue Jun 22 10:02:29 2004
@@ -8,14 +8,12 @@
-MAINTAINER= wjv at FreeBSD.org
+MAINTAINER= fernan at iib.unsam.edu.ar
COMMENT= A collection of programs for searching DNA and protein databases, v3
-BROKEN= "Checksum mismatch"
NO_CDROM= May not be sold or incorporated into a commercial product
--- Makefile.diff ends here ---
--- distinfo.diff begins here ---
--- /usr/ports/biology/fasta3/distinfo Sat Apr 3 01:03:35 2004
+++ distinfo Tue Jun 22 09:49:44 2004
@@ -1,2 +1,2 @@
-MD5 (fasta33t08d4.shar.Z) = 66f0c4731a6ff1cf123067c6ec46e352
-SIZE (fasta33t08d4.shar.Z) = 690366
+MD5 (fasta33t08d4.shar.Z) = e6217268e122b2ca7c51b443425e40e3
+SIZE (fasta33t08d4.shar.Z) = 685912
--- distinfo.diff ends here ---
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