ports/67735: biology/ncbi-toolkit does not build bl2seq

[Fernan Aguero]

>Number:         67735
>Category:       ports
>Synopsis:       biology/ncbi-toolkit does not build bl2seq
>Confidential:   no
>Severity:       serious
>Priority:       medium
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          sw-bug
>Submitter-Id:   current-users
>Arrival-Date:   Wed Jun 09 04:10:22 GMT 2004
>Closed-Date:
>Last-Modified:
>Originator:     Fernan Aguero
>Release:        FreeBSD 4.10-RELEASE i386
>Organization:
IIB-UNSAM
>Environment:
	FreeBSD pi.iib.unsam.edu.ar 4.10-RELEASE FreeBSD 4.10-RELEASE #0: Wed May 26 12:56:43 ART 2004 fernan at pi.iib.unsam.edu.ar:/usr/obj/usr/src/sys/PI  i386
	
>Description:
	The standard build of ncbi-toolkit does not produce the
	executable bl2seq, which is part of the toolkit.

	The source bl2seq.c is present under ncbi/build/, it is not
	compiled, and obviously it is not installed (bin/bl2seq is not
	listed in pkg-plist). However, I do remember using bl2seq about
	a year ago, and can see it in an old pkg-plist.

	The ncbi-toolkit has been updated, so perhaps this is
	already fixed in the new version?. I'm downloading the tarball
	now, but will not have time to work on it until late next week.
	
>How-To-Repeat:

	cd /usr/ports/biology/ncbi-toolkit
	make
	ls work/ncbi/build/bl2seq*

	you'll see just bl2seq.c (not bl2seq.o, not bl2seq)
>Fix:

	


>Release-Note:
>Audit-Trail:
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