[REL - head-i386-default][science/cdo] Failed for cdo-1.6.1_1 in build
pkg-fallout-builder at FreeBSD.org
pkg-fallout-builder at FreeBSD.org
Sat Apr 12 13:51:42 UTC 2014
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: sunpoet at FreeBSD.org
Last committer: sunpoet at FreeBSD.org
Ident: $FreeBSD: head/science/cdo/Makefile 350294 2014-04-06 05:46:46Z sunpoet $
Log URL: http://beefy1.isc.freebsd.org/bulk/head-i386-default/2014-04-11_21h59m23s/logs/cdo-1.6.1_1.log
Build URL: http://beefy1.isc.freebsd.org/bulk/head-i386-default/2014-04-11_21h59m23s
Log:
====>> Building science/cdo
build started at Sat Apr 12 13:50:04 UTC 2014
port directory: /usr/ports/science/cdo
building for: FreeBSD head-i386-default-job-20 11.0-CURRENT FreeBSD 11.0-CURRENT r264257 i386
maintained by: sunpoet at FreeBSD.org
Makefile ident: $FreeBSD: head/science/cdo/Makefile 350294 2014-04-06 05:46:46Z sunpoet $
Poudriere version: 3.1-pre
---Begin Environment---
UNAME_m=i386
UNAME_p=i386
OSVERSION=1100018
UNAME_v=FreeBSD 11.0-CURRENT r264257
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
MASTERMNT=/usr/local/poudriere/data/build/head-i386-default/ref
PKG_EXT=txz
tpid=91862
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=cdo-1.6.1_1
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
PWD=/root
MASTERNAME=head-i386-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---
---Begin OPTIONS List---
===> The following configuration options are available for cdo-1.6.1_1:
HDF5=on: HDF-5 data format support
JASPER=off: JPEG 2000 support via JasPer
NETCDF=on: NetCDF data format support
PROJ=on: PROJ.4 cartographic projections support
SZIP=on: Szip compression support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--CONFIGURE_ARGS--
--enable-cdi-lib --program-transform-name="" --with-zlib=/usr --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" MAKE=gmake TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--
--MAKE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing" CPP="cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -L/usr/local/lib -pthread" CXX="c++" CXXFLAGS="-O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444"
--End MAKE_ENV--
--SUB_LIST--
HDF5=""
NO_HDF5="@comment
"
JASPER="@comment
"
NO_JASPER=""
NETCDF=""
NO_NETCDF="@comment
"
PROJ=""
NO_PROJ="@comment
"
SZIP=""
NO_SZIP="@comment
"
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/cdo
DOCSDIR=/usr/local/share/doc/cdo
EXAMPLESDIR=/usr/local/share/examples/cdo
WWWDIR=/usr/local/www/cdo
ETCDIR=/usr/local/etc/cdo
--End SUB_LIST--
---Begin make.conf---
ARCH=i386
MACHINE=i386
MACHINE_ARCH=i386
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===> Cleaning for cdo-1.6.1_1
=======================<phase: check-config >============================
===========================================================================
=======================<phase: pkg-depends >============================
===> cdo-1.6.1_1 depends on file: /usr/local/sbin/pkg - not found
===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===> Installing existing package /packages/All/pkg-1.2.7_2.txz
Installing pkg-1.2.7_2... done
If you are upgrading from the old package format, first run:
# pkg2ng
===> Returning to build of cdo-1.6.1_1
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by cdo-1.6.1_1 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by cdo-1.6.1_1 for building
=> SHA256 Checksum OK for cdo-1.6.1.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by cdo-1.6.1_1 for building
===> Extracting for cdo-1.6.1_1
=> SHA256 Checksum OK for cdo-1.6.1.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for cdo-1.6.1_1
===> Applying FreeBSD patches for cdo-1.6.1_1
===========================================================================
=======================<phase: build-depends >============================
===> cdo-1.6.1_1 depends on executable: gmake - not found
===> Verifying install for gmake in /usr/ports/devel/gmake
===> Installing existing package /packages/All/gmake-3.82_1.txz
Installing gmake-3.82_1...Installing gettext-0.18.3.1... done
done
===> Returning to build of cdo-1.6.1_1
===========================================================================
=======================<phase: lib-depends >============================
===> cdo-1.6.1_1 depends on shared library: libhdf5.so - not found
===> Verifying for libhdf5.so in /usr/ports/science/hdf5-18
===> Installing existing package /packages/All/hdf5-18-1.8.10_1.txz
Installing hdf5-18-1.8.10_1... done
===> Returning to build of cdo-1.6.1_1
===> cdo-1.6.1_1 depends on shared library: libnetcdf.so - not found
===> Verifying for libnetcdf.so in /usr/ports/science/netcdf4
===> Installing existing package /packages/All/netcdf-4.1.3_3.txz
Installing netcdf-4.1.3_3... done
===> Returning to build of cdo-1.6.1_1
===> cdo-1.6.1_1 depends on shared library: libproj.so - not found
===> Verifying for libproj.so in /usr/ports/graphics/proj
===> Installing existing package /packages/All/proj-4.8.0_2.txz
Installing proj-4.8.0_2... done
===> Returning to build of cdo-1.6.1_1
===> cdo-1.6.1_1 depends on shared library: libsz.so - not found
===> Verifying for libsz.so in /usr/ports/science/szip
===> Installing existing package /packages/All/hdf-szip-2.1_1.txz
Installing hdf-szip-2.1_1... done
===> Returning to build of cdo-1.6.1_1
===========================================================================
=======================<phase: configure >============================
===> Configuring for cdo-1.6.1_1
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/acinclude.m4
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/libcdi/acinclude.m4
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/libcdi/m4/libtool.m4
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/libcdi/aclocal.m4
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/libcdi/configure
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/m4/libtool.m4
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/aclocal.m4
===> FreeBSD 10 autotools fix applied to /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/configure
configure: loading site script /usr/ports/Templates/config.site
checking build system type... i386-portbld-freebsd11.0
checking host system type... i386-portbld-freebsd11.0
checking for a BSD-compatible install... /usr/bin/install -c -o root -g wheel
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p
checking for gawk... (cached) /usr/bin/awk
checking whether gmake sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
configure: setting up libtool
checking how to print strings... printf
checking for style of include used by gmake... GNU
checking for gcc... cc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking dependency style of cc... gcc3
<snip>
mv -f .deps/cdo-Ydrunpctl.Tpo .deps/cdo-Ydrunpctl.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Ydrunstat.o -MD -MP -MF .deps/cdo-Ydrunstat.Tpo -c -o cdo-Ydrunstat.o `test -f 'Ydrunstat.c' || echo './'`Ydrunstat.c
mv -f .deps/cdo-Ydrunstat.Tpo .deps/cdo-Ydrunstat.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Yhourarith.o -MD -MP -MF .deps/cdo-Yhourarith.Tpo -c -o cdo-Yhourarith.o `test -f 'Yhourarith.c' || echo './'`Yhourarith.c
mv -f .deps/cdo-Yhourarith.Tpo .deps/cdo-Yhourarith.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Yhourstat.o -MD -MP -MF .deps/cdo-Yhourstat.Tpo -c -o cdo-Yhourstat.o `test -f 'Yhourstat.c' || echo './'`Yhourstat.c
mv -f .deps/cdo-Yhourstat.Tpo .deps/cdo-Yhourstat.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Ymonarith.o -MD -MP -MF .deps/cdo-Ymonarith.Tpo -c -o cdo-Ymonarith.o `test -f 'Ymonarith.c' || echo './'`Ymonarith.c
mv -f .deps/cdo-Ymonarith.Tpo .deps/cdo-Ymonarith.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Ymonpctl.o -MD -MP -MF .deps/cdo-Ymonpctl.Tpo -c -o cdo-Ymonpctl.o `test -f 'Ymonpctl.c' || echo './'`Ymonpctl.c
mv -f .deps/cdo-Ymonpctl.Tpo .deps/cdo-Ymonpctl.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Ymonstat.o -MD -MP -MF .deps/cdo-Ymonstat.Tpo -c -o cdo-Ymonstat.o `test -f 'Ymonstat.c' || echo './'`Ymonstat.c
mv -f .deps/cdo-Ymonstat.Tpo .deps/cdo-Ymonstat.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Yseaspctl.o -MD -MP -MF .deps/cdo-Yseaspctl.Tpo -c -o cdo-Yseaspctl.o `test -f 'Yseaspctl.c' || echo './'`Yseaspctl.c
mv -f .deps/cdo-Yseaspctl.Tpo .deps/cdo-Yseaspctl.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Yseasstat.o -MD -MP -MF .deps/cdo-Yseasstat.Tpo -c -o cdo-Yseasstat.o `test -f 'Yseasstat.c' || echo './'`Yseasstat.c
mv -f .deps/cdo-Yseasstat.Tpo .deps/cdo-Yseasstat.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-Zonstat.o -MD -MP -MF .deps/cdo-Zonstat.Tpo -c -o cdo-Zonstat.o `test -f 'Zonstat.c' || echo './'`Zonstat.c
mv -f .deps/cdo-Zonstat.Tpo .deps/cdo-Zonstat.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-cdo_pthread.o -MD -MP -MF .deps/cdo-cdo_pthread.Tpo -c -o cdo-cdo_pthread.o `test -f 'cdo_pthread.c' || echo './'`cdo_pthread.c
cdo_pthread.c:47:49: warning: format specifies type 'int' but the argument has type 'unsigned long' [-Wformat]
fprintf(stderr, "PTHREAD_THREADS_MAX = %d\n", PTHREAD_THREADS_MAX);
~~ ^~~~~~~~~~~~~~~~~~~
%lu
/usr/include/pthread.h:55:31: note: expanded from macro 'PTHREAD_THREADS_MAX'
#define PTHREAD_THREADS_MAX __ULONG_MAX
^~~~~~~~~~~
/usr/include/x86/_limits.h:65:21: note: expanded from macro '__ULONG_MAX'
#define __ULONG_MAX 0xffffffffUL
^~~~~~~~~~~~
1 warning generated.
mv -f .deps/cdo-cdo_pthread.Tpo .deps/cdo-cdo_pthread.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-cdo_vlist.o -MD -MP -MF .deps/cdo-cdo_vlist.Tpo -c -o cdo-cdo_vlist.o `test -f 'cdo_vlist.c' || echo './'`cdo_vlist.c
mv -f .deps/cdo-cdo_vlist.Tpo .deps/cdo-cdo_vlist.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-color.o -MD -MP -MF .deps/cdo-color.Tpo -c -o cdo-color.o `test -f 'color.c' || echo './'`color.c
mv -f .deps/cdo-color.Tpo .deps/cdo-color.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-commandline.o -MD -MP -MF .deps/cdo-commandline.Tpo -c -o cdo-commandline.o `test -f 'commandline.c' || echo './'`commandline.c
mv -f .deps/cdo-commandline.Tpo .deps/cdo-commandline.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-ecacore.o -MD -MP -MF .deps/cdo-ecacore.Tpo -c -o cdo-ecacore.o `test -f 'ecacore.c' || echo './'`ecacore.c
mv -f .deps/cdo-ecacore.Tpo .deps/cdo-ecacore.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-ecautil.o -MD -MP -MF .deps/cdo-ecautil.Tpo -c -o cdo-ecautil.o `test -f 'ecautil.c' || echo './'`ecautil.c
mv -f .deps/cdo-ecautil.Tpo .deps/cdo-ecautil.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-exception.o -MD -MP -MF .deps/cdo-exception.Tpo -c -o cdo-exception.o `test -f 'exception.c' || echo './'`exception.c
mv -f .deps/cdo-exception.Tpo .deps/cdo-exception.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-expr.o -MD -MP -MF .deps/cdo-expr.Tpo -c -o cdo-expr.o `test -f 'expr.c' || echo './'`expr.c
mv -f .deps/cdo-expr.Tpo .deps/cdo-expr.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-expr_lex.o -MD -MP -MF .deps/cdo-expr_lex.Tpo -c -o cdo-expr_lex.o `test -f 'expr_lex.c' || echo './'`expr_lex.c
mv -f .deps/cdo-expr_lex.Tpo .deps/cdo-expr_lex.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-expr_yacc.o -MD -MP -MF .deps/cdo-expr_yacc.Tpo -c -o cdo-expr_yacc.o `test -f 'expr_yacc.c' || echo './'`expr_yacc.c
mv -f .deps/cdo-expr_yacc.Tpo .deps/cdo-expr_yacc.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-field.o -MD -MP -MF .deps/cdo-field.Tpo -c -o cdo-field.o `test -f 'field.c' || echo './'`field.c
mv -f .deps/cdo-field.Tpo .deps/cdo-field.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-field2.o -MD -MP -MF .deps/cdo-field2.Tpo -c -o cdo-field2.o `test -f 'field2.c' || echo './'`field2.c
mv -f .deps/cdo-field2.Tpo .deps/cdo-field2.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-fieldc.o -MD -MP -MF .deps/cdo-fieldc.Tpo -c -o cdo-fieldc.o `test -f 'fieldc.c' || echo './'`fieldc.c
mv -f .deps/cdo-fieldc.Tpo .deps/cdo-fieldc.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-fieldmem.o -MD -MP -MF .deps/cdo-fieldmem.Tpo -c -o cdo-fieldmem.o `test -f 'fieldmem.c' || echo './'`fieldmem.c
mv -f .deps/cdo-fieldmem.Tpo .deps/cdo-fieldmem.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-fieldmer.o -MD -MP -MF .deps/cdo-fieldmer.Tpo -c -o cdo-fieldmer.o `test -f 'fieldmer.c' || echo './'`fieldmer.c
mv -f .deps/cdo-fieldmer.Tpo .deps/cdo-fieldmer.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-fieldzon.o -MD -MP -MF .deps/cdo-fieldzon.Tpo -c -o cdo-fieldzon.o `test -f 'fieldzon.c' || echo './'`fieldzon.c
mv -f .deps/cdo-fieldzon.Tpo .deps/cdo-fieldzon.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-fouriertrans.o -MD -MP -MF .deps/cdo-fouriertrans.Tpo -c -o cdo-fouriertrans.o `test -f 'fouriertrans.c' || echo './'`fouriertrans.c
mv -f .deps/cdo-fouriertrans.Tpo .deps/cdo-fouriertrans.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-gradsdeslib.o -MD -MP -MF .deps/cdo-gradsdeslib.Tpo -c -o cdo-gradsdeslib.o `test -f 'gradsdeslib.c' || echo './'`gradsdeslib.c
mv -f .deps/cdo-gradsdeslib.Tpo .deps/cdo-gradsdeslib.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-grid.o -MD -MP -MF .deps/cdo-grid.Tpo -c -o cdo-grid.o `test -f 'grid.c' || echo './'`grid.c
mv -f .deps/cdo-grid.Tpo .deps/cdo-grid.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-grid_gme.o -MD -MP -MF .deps/cdo-grid_gme.Tpo -c -o cdo-grid_gme.o `test -f 'grid_gme.c' || echo './'`grid_gme.c
mv -f .deps/cdo-grid_gme.Tpo .deps/cdo-grid_gme.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-grid_lcc.o -MD -MP -MF .deps/cdo-grid_lcc.Tpo -c -o cdo-grid_lcc.o `test -f 'grid_lcc.c' || echo './'`grid_lcc.c
mv -f .deps/cdo-grid_lcc.Tpo .deps/cdo-grid_lcc.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-grid_rot.o -MD -MP -MF .deps/cdo-grid_rot.Tpo -c -o cdo-grid_rot.o `test -f 'grid_rot.c' || echo './'`grid_rot.c
mv -f .deps/cdo-grid_rot.Tpo .deps/cdo-grid_rot.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-griddes.o -MD -MP -MF .deps/cdo-griddes.Tpo -c -o cdo-griddes.o `test -f 'griddes.c' || echo './'`griddes.c
mv -f .deps/cdo-griddes.Tpo .deps/cdo-griddes.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-griddes_h5.o -MD -MP -MF .deps/cdo-griddes_h5.Tpo -c -o cdo-griddes_h5.o `test -f 'griddes_h5.c' || echo './'`griddes_h5.c
mv -f .deps/cdo-griddes_h5.Tpo .deps/cdo-griddes_h5.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-griddes_nc.o -MD -MP -MF .deps/cdo-griddes_nc.Tpo -c -o cdo-griddes_nc.o `test -f 'griddes_nc.c' || echo './'`griddes_nc.c
mv -f .deps/cdo-griddes_nc.Tpo .deps/cdo-griddes_nc.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-hetaeta.o -MD -MP -MF .deps/cdo-hetaeta.Tpo -c -o cdo-hetaeta.o `test -f 'hetaeta.c' || echo './'`hetaeta.c
mv -f .deps/cdo-hetaeta.Tpo .deps/cdo-hetaeta.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-history.o -MD -MP -MF .deps/cdo-history.Tpo -c -o cdo-history.o `test -f 'history.c' || echo './'`history.c
mv -f .deps/cdo-history.Tpo .deps/cdo-history.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-institution.o -MD -MP -MF .deps/cdo-institution.Tpo -c -o cdo-institution.o `test -f 'institution.c' || echo './'`institution.c
mv -f .deps/cdo-institution.Tpo .deps/cdo-institution.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-interpol.o -MD -MP -MF .deps/cdo-interpol.Tpo -c -o cdo-interpol.o `test -f 'interpol.c' || echo './'`interpol.c
mv -f .deps/cdo-interpol.Tpo .deps/cdo-interpol.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-job.o -MD -MP -MF .deps/cdo-job.Tpo -c -o cdo-job.o `test -f 'job.c' || echo './'`job.c
mv -f .deps/cdo-job.Tpo .deps/cdo-job.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-juldate.o -MD -MP -MF .deps/cdo-juldate.Tpo -c -o cdo-juldate.o `test -f 'juldate.c' || echo './'`juldate.c
mv -f .deps/cdo-juldate.Tpo .deps/cdo-juldate.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-kvlist.o -MD -MP -MF .deps/cdo-kvlist.Tpo -c -o cdo-kvlist.o `test -f 'kvlist.c' || echo './'`kvlist.c
kvlist.c:138:90: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
fprintf(stderr, "readLineFromBuffer: end of line not found (maxlen = %ld)!\n", len);
~~~ ^~~
%zu
1 warning generated.
mv -f .deps/cdo-kvlist.Tpo .deps/cdo-kvlist.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-legendre.o -MD -MP -MF .deps/cdo-legendre.Tpo -c -o cdo-legendre.o `test -f 'legendre.c' || echo './'`legendre.c
mv -f .deps/cdo-legendre.Tpo .deps/cdo-legendre.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-list.o -MD -MP -MF .deps/cdo-list.Tpo -c -o cdo-list.o `test -f 'list.c' || echo './'`list.c
mv -f .deps/cdo-list.Tpo .deps/cdo-list.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-merge_sort2.o -MD -MP -MF .deps/cdo-merge_sort2.Tpo -c -o cdo-merge_sort2.o `test -f 'merge_sort2.c' || echo './'`merge_sort2.c
mv -f .deps/cdo-merge_sort2.Tpo .deps/cdo-merge_sort2.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-modules.o -MD -MP -MF .deps/cdo-modules.Tpo -c -o cdo-modules.o `test -f 'modules.c' || echo './'`modules.c
In file included from modules.c:27:
./operator_help.h:4331:44: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T FLOAT Temperature threshold (<B0> Celsius, default: T = 25<B0> Celsius)",
^~~~ ~~~~
./operator_help.h:4383:45: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T FLOAT Temperature offset (<B0> Celsius, default: T = 5<B0> Celsius)",
^~~~ ~~~~
./operator_help.h:4490:78: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T FLOAT Temperature threshold (degree Celsius, default: T = 5<B0> Celsius)",
^~~~
./operator_help.h:4515:41: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T1 FLOAT Temperature limit (<B0> Celsius, default: T1 = 17<B0> Celsius)",
^~~~ ~~~~
./operator_help.h:4516:41: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T2 FLOAT Temperature limit (<B0> Celsius, default: T2 = T1)",
^~~~
./operator_help.h:4546:45: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T FLOAT Temperature offset (<B0> Celsius, default: T = 5<B0> Celsius)",
^~~~ ~~~~
./operator_help.h:4892:75: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T FLOAT Temperature threshold (degree Celsius, default: T = 25<B0> Celsius)",
^~~~
./operator_help.h:5002:44: warning: illegal character encoding in string literal [-Winvalid-source-encoding]
" T FLOAT Temperature threshold (<B0> Celsius, default: T = 20<B0> Celsius)",
^~~~ ~~~~
8 warnings generated.
mv -f .deps/cdo-modules.Tpo .deps/cdo-modules.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-namelist.o -MD -MP -MF .deps/cdo-namelist.Tpo -c -o cdo-namelist.o `test -f 'namelist.c' || echo './'`namelist.c
mv -f .deps/cdo-namelist.Tpo .deps/cdo-namelist.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-normal.o -MD -MP -MF .deps/cdo-normal.Tpo -c -o cdo-normal.o `test -f 'normal.c' || echo './'`normal.c
mv -f .deps/cdo-normal.Tpo .deps/cdo-normal.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-nth_element.o -MD -MP -MF .deps/cdo-nth_element.Tpo -c -o cdo-nth_element.o `test -f 'nth_element.c' || echo './'`nth_element.c
mv -f .deps/cdo-nth_element.Tpo .deps/cdo-nth_element.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-par_io.o -MD -MP -MF .deps/cdo-par_io.Tpo -c -o cdo-par_io.o `test -f 'par_io.c' || echo './'`par_io.c
mv -f .deps/cdo-par_io.Tpo .deps/cdo-par_io.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-percentiles.o -MD -MP -MF .deps/cdo-percentiles.Tpo -c -o cdo-percentiles.o `test -f 'percentiles.c' || echo './'`percentiles.c
mv -f .deps/cdo-percentiles.Tpo .deps/cdo-percentiles.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-pipe.o -MD -MP -MF .deps/cdo-pipe.Tpo -c -o cdo-pipe.o `test -f 'pipe.c' || echo './'`pipe.c
mv -f .deps/cdo-pipe.Tpo .deps/cdo-pipe.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-process.o -MD -MP -MF .deps/cdo-process.Tpo -c -o cdo-process.o `test -f 'process.c' || echo './'`process.c
mv -f .deps/cdo-process.Tpo .deps/cdo-process.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-pstream.o -MD -MP -MF .deps/cdo-pstream.Tpo -c -o cdo-pstream.o `test -f 'pstream.c' || echo './'`pstream.c
mv -f .deps/cdo-pstream.Tpo .deps/cdo-pstream.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-pthread_debug.o -MD -MP -MF .deps/cdo-pthread_debug.Tpo -c -o cdo-pthread_debug.o `test -f 'pthread_debug.c' || echo './'`pthread_debug.c
mv -f .deps/cdo-pthread_debug.Tpo .deps/cdo-pthread_debug.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-readline.o -MD -MP -MF .deps/cdo-readline.Tpo -c -o cdo-readline.o `test -f 'readline.c' || echo './'`readline.c
mv -f .deps/cdo-readline.Tpo .deps/cdo-readline.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-realtime.o -MD -MP -MF .deps/cdo-realtime.Tpo -c -o cdo-realtime.o `test -f 'realtime.c' || echo './'`realtime.c
mv -f .deps/cdo-realtime.Tpo .deps/cdo-realtime.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-remaplib.o -MD -MP -MF .deps/cdo-remaplib.Tpo -c -o cdo-remaplib.o `test -f 'remaplib.c' || echo './'`remaplib.c
mv -f .deps/cdo-remaplib.Tpo .deps/cdo-remaplib.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-remapsort.o -MD -MP -MF .deps/cdo-remapsort.Tpo -c -o cdo-remapsort.o `test -f 'remapsort.c' || echo './'`remapsort.c
mv -f .deps/cdo-remapsort.Tpo .deps/cdo-remapsort.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-specspace.o -MD -MP -MF .deps/cdo-specspace.Tpo -c -o cdo-specspace.o `test -f 'specspace.c' || echo './'`specspace.c
mv -f .deps/cdo-specspace.Tpo .deps/cdo-specspace.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-statistic.o -MD -MP -MF .deps/cdo-statistic.Tpo -c -o cdo-statistic.o `test -f 'statistic.c' || echo './'`statistic.c
mv -f .deps/cdo-statistic.Tpo .deps/cdo-statistic.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-table.o -MD -MP -MF .deps/cdo-table.Tpo -c -o cdo-table.o `test -f 'table.c' || echo './'`table.c
mv -f .deps/cdo-table.Tpo .deps/cdo-table.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-timer.o -MD -MP -MF .deps/cdo-timer.Tpo -c -o cdo-timer.o `test -f 'timer.c' || echo './'`timer.c
mv -f .deps/cdo-timer.Tpo .deps/cdo-timer.Po
cc -DHAVE_CONFIG_H -I. -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -DLOGPATH=/usr/local/log -c -o cdo-userlog.o `test -f 'userlog.c' || echo './'`userlog.c
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-util.o -MD -MP -MF .deps/cdo-util.Tpo -c -o cdo-util.o `test -f 'util.c' || echo './'`util.c
mv -f .deps/cdo-util.Tpo .deps/cdo-util.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-vinterp.o -MD -MP -MF .deps/cdo-vinterp.Tpo -c -o cdo-vinterp.o `test -f 'vinterp.c' || echo './'`vinterp.c
mv -f .deps/cdo-vinterp.Tpo .deps/cdo-vinterp.Po
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdo-zaxis.o -MD -MP -MF .deps/cdo-zaxis.Tpo -c -o cdo-zaxis.o `test -f 'zaxis.c' || echo './'`zaxis.c
mv -f .deps/cdo-zaxis.Tpo .deps/cdo-zaxis.Po
/bin/sh ../libtool --tag=CC --mode=link cc -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -L/usr/lib -L/usr/local/lib -pthread -o cdo cdo-cdo.o cdo-Adisit.o cdo-Arith.o cdo-Arithc.o cdo-Arithdays.o cdo-Arithlat.o cdo-CDItest.o cdo-CDIread.o cdo-CDIwrite.o cdo-Cat.o cdo-Change.o cdo-Change_e5slm.o cdo-Cloudlayer.o cdo-Command.o cdo-Comp.o cdo-Compc.o cdo-Complextorect.o cdo-Cond.o cdo-Cond2.o cdo-Condc.o cdo-Consecstat.o cdo-Copy.o cdo-Deltime.o cdo-Derivepar.o cdo-Detrend.o cdo-Diff.o cdo-Duplicate.o cdo-EOFs.o cdo-Eof3d.o cdo-EcaIndices.o cdo-Echam5ini.o cdo-Enlarge.o cdo-Enlargegrid.o cdo-Ensstat.o cdo-Ensstat3.o cdo-Ensval.o cdo-Eofcoeff.o cdo-Eofcoeff3d.o cdo-Exprf.o cdo-FC.o cdo-Filedes.o cdo-Fillmiss.o cdo-Filter.o cdo-Fldrms.o cdo-Fldstat.o cdo-Fldstat2.o cdo-Fourier.o cdo-Gather.o cdo-Gengrid.o cdo-Gradsdes.o cdo-Gridboxstat.o cdo-Gridcell.o cdo-Harmonic.o cdo-Hi.o cdo-Histogram.o cdo-Importamsr.o cdo-Importbinary.o cdo-Importcmsaf.o cdo-Imp
ortobs.o cdo-Info.o cdo-Input.o cdo-Intgrid.o cdo-Intgridtraj.o cdo-Intlevel.o cdo-Intlevel3d.o cdo-Intntime.o cdo-Inttime.o cdo-Intyear.o cdo-Invert.o cdo-Invertlev.o cdo-Isosurface.o cdo-Kvl.o cdo-Log.o cdo-Maskbox.o cdo-Mastrfu.o cdo-Math.o cdo-Merge.o cdo-Mergegrid.o cdo-Mergetime.o cdo-Merstat.o cdo-Monarith.o cdo-Mrotuv.o cdo-Mrotuvb.o cdo-Ninfo.o cdo-Nmltest.o cdo-Output.o cdo-Outputgmt.o cdo-Pack.o cdo-Pinfo.o cdo-Pressure.o cdo-Regres.o cdo-Remap.o cdo-Remapeta.o cdo-Replace.o cdo-Replacevalues.o cdo-Rhopot.o cdo-Rotuv.o cdo-Runpctl.o cdo-Runstat.o cdo-Scatter.o cdo-Seascount.o cdo-Seaspctl.o cdo-Seasstat.o cdo-Selbox.o cdo-Select.o cdo-Seloperator.o cdo-Selrec.o cdo-Seltime.o cdo-Selvar.o cdo-Set.o cdo-Setbox.o cdo-Setgatt.o cdo-Setgrid.o cdo-Sethalo.o cdo-Setmiss.o cdo-Setpartab.o cdo-Setrcaname.o cdo-Settime.o cdo-Setzaxis.o cdo-Showinfo.o cdo-Sinfo.o cdo-Smooth9.o cdo-Sort.o cdo-Sorttimestamp.o cdo-Specinfo.o cdo-Spectral.o cdo-Spectrum.o cdo-Split.o cdo-Splitrec.o cdo-
Splitsel.o cdo-Splittime.o cdo-Splityear.o c!
do-SSOpar.o cdo-Subtrend.o cdo-Tee.o cdo-Templates.o cdo-Test.o cdo-Tests.o cdo-Timcount.o cdo-Timpctl.o cdo-Timselpctl.o cdo-Timselstat.o cdo-Timsort.o cdo-Timstat.o cdo-Timstat2.o cdo-Timstat3.o cdo-Tinfo.o cdo-Tocomplex.o cdo-Transpose.o cdo-Trend.o cdo-Trms.o cdo-Tstepcount.o cdo-Vardup.o cdo-Vargen.o cdo-Varrms.o cdo-Vertint.o cdo-Vertstat.o cdo-Vertwind.o cdo-Wct.o cdo-Wind.o cdo-Writegrid.o cdo-Writerandom.o cdo-YAR.o cdo-Yearmonstat.o cdo-Ydayarith.o cdo-Ydaypctl.o cdo-Ydaystat.o cdo-Ydrunpctl.o cdo-Ydrunstat.o cdo-Yhourarith.o cdo-Yhourstat.o cdo-Ymonarith.o cdo-Ymonpctl.o cdo-Ymonstat.o cdo-Yseaspctl.o cdo-Yseasstat.o cdo-Zonstat.o cdo-cdo_pthread.o cdo-cdo_vlist.o cdo-color.o cdo-commandline.o cdo-ecacore.o cdo-ecautil.o cdo-exception.o cdo-expr.o cdo-expr_lex.o cdo-expr_yacc.o cdo-field.o cdo-field2.o cdo-fieldc.o cdo-fieldmem.o cdo-fieldmer.o cdo-fieldzon.o cdo-fouriertrans.o cdo-gradsdeslib.o cdo-grid.o cdo-grid_gme.o cdo-grid_lcc.o cdo-grid_rot.o cdo-griddes.o cdo-gri
ddes_h5.o cdo-griddes_nc.o cdo-hetaeta.o cdo-history.o cdo-institution.o cdo-interpol.o cdo-job.o cdo-juldate.o cdo-kvlist.o cdo-legendre.o cdo-list.o cdo-merge_sort2.o cdo-modules.o cdo-namelist.o cdo-normal.o cdo-nth_element.o cdo-par_io.o cdo-percentiles.o cdo-pipe.o cdo-process.o cdo-pstream.o cdo-pthread_debug.o cdo-readline.o cdo-realtime.o cdo-remaplib.o cdo-remapsort.o cdo-specspace.o cdo-statistic.o cdo-table.o cdo-timer.o cdo-userlog.o cdo-util.o cdo-vinterp.o cdo-zaxis.o ../libcdi/src/libcdi.la -lz -lm
libtool: link: cc -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -pthread -o .libs/cdo cdo-cdo.o cdo-Adisit.o cdo-Arith.o cdo-Arithc.o cdo-Arithdays.o cdo-Arithlat.o cdo-CDItest.o cdo-CDIread.o cdo-CDIwrite.o cdo-Cat.o cdo-Change.o cdo-Change_e5slm.o cdo-Cloudlayer.o cdo-Command.o cdo-Comp.o cdo-Compc.o cdo-Complextorect.o cdo-Cond.o cdo-Cond2.o cdo-Condc.o cdo-Consecstat.o cdo-Copy.o cdo-Deltime.o cdo-Derivepar.o cdo-Detrend.o cdo-Diff.o cdo-Duplicate.o cdo-EOFs.o cdo-Eof3d.o cdo-EcaIndices.o cdo-Echam5ini.o cdo-Enlarge.o cdo-Enlargegrid.o cdo-Ensstat.o cdo-Ensstat3.o cdo-Ensval.o cdo-Eofcoeff.o cdo-Eofcoeff3d.o cdo-Exprf.o cdo-FC.o cdo-Filedes.o cdo-Fillmiss.o cdo-Filter.o cdo-Fldrms.o cdo-Fldstat.o cdo-Fldstat2.o cdo-Fourier.o cdo-Gather.o cdo-Gengrid.o cdo-Gradsdes.o cdo-Gridboxstat.o cdo-Gridcell.o cdo-Harmonic.o cdo-Hi.o cdo-Histogram.o cdo-Importamsr.o cdo-Importbinary.o cdo-Importcmsaf.o cdo-Importobs.o cdo-Info.o cdo-Input.o cdo-Intgrid.o cdo-Intg
ridtraj.o cdo-Intlevel.o cdo-Intlevel3d.o cdo-Intntime.o cdo-Inttime.o cdo-Intyear.o cdo-Invert.o cdo-Invertlev.o cdo-Isosurface.o cdo-Kvl.o cdo-Log.o cdo-Maskbox.o cdo-Mastrfu.o cdo-Math.o cdo-Merge.o cdo-Mergegrid.o cdo-Mergetime.o cdo-Merstat.o cdo-Monarith.o cdo-Mrotuv.o cdo-Mrotuvb.o cdo-Ninfo.o cdo-Nmltest.o cdo-Output.o cdo-Outputgmt.o cdo-Pack.o cdo-Pinfo.o cdo-Pressure.o cdo-Regres.o cdo-Remap.o cdo-Remapeta.o cdo-Replace.o cdo-Replacevalues.o cdo-Rhopot.o cdo-Rotuv.o cdo-Runpctl.o cdo-Runstat.o cdo-Scatter.o cdo-Seascount.o cdo-Seaspctl.o cdo-Seasstat.o cdo-Selbox.o cdo-Select.o cdo-Seloperator.o cdo-Selrec.o cdo-Seltime.o cdo-Selvar.o cdo-Set.o cdo-Setbox.o cdo-Setgatt.o cdo-Setgrid.o cdo-Sethalo.o cdo-Setmiss.o cdo-Setpartab.o cdo-Setrcaname.o cdo-Settime.o cdo-Setzaxis.o cdo-Showinfo.o cdo-Sinfo.o cdo-Smooth9.o cdo-Sort.o cdo-Sorttimestamp.o cdo-Specinfo.o cdo-Spectral.o cdo-Spectrum.o cdo-Split.o cdo-Splitrec.o cdo-Splitsel.o cdo-Splittime.o cdo-Splityear.o cdo-SSOpar.
o cdo-Subtrend.o cdo-Tee.o cdo-Templates.o c!
do-Test.o cdo-Tests.o cdo-Timcount.o cdo-Timpctl.o cdo-Timselpctl.o cdo-Timselstat.o cdo-Timsort.o cdo-Timstat.o cdo-Timstat2.o cdo-Timstat3.o cdo-Tinfo.o cdo-Tocomplex.o cdo-Transpose.o cdo-Trend.o cdo-Trms.o cdo-Tstepcount.o cdo-Vardup.o cdo-Vargen.o cdo-Varrms.o cdo-Vertint.o cdo-Vertstat.o cdo-Vertwind.o cdo-Wct.o cdo-Wind.o cdo-Writegrid.o cdo-Writerandom.o cdo-YAR.o cdo-Yearmonstat.o cdo-Ydayarith.o cdo-Ydaypctl.o cdo-Ydaystat.o cdo-Ydrunpctl.o cdo-Ydrunstat.o cdo-Yhourarith.o cdo-Yhourstat.o cdo-Ymonarith.o cdo-Ymonpctl.o cdo-Ymonstat.o cdo-Yseaspctl.o cdo-Yseasstat.o cdo-Zonstat.o cdo-cdo_pthread.o cdo-cdo_vlist.o cdo-color.o cdo-commandline.o cdo-ecacore.o cdo-ecautil.o cdo-exception.o cdo-expr.o cdo-expr_lex.o cdo-expr_yacc.o cdo-field.o cdo-field2.o cdo-fieldc.o cdo-fieldmem.o cdo-fieldmer.o cdo-fieldzon.o cdo-fouriertrans.o cdo-gradsdeslib.o cdo-grid.o cdo-grid_gme.o cdo-grid_lcc.o cdo-grid_rot.o cdo-griddes.o cdo-griddes_h5.o cdo-griddes_nc.o cdo-hetaeta.o cdo-history.o
cdo-institution.o cdo-interpol.o cdo-job.o cdo-juldate.o cdo-kvlist.o cdo-legendre.o cdo-list.o cdo-merge_sort2.o cdo-modules.o cdo-namelist.o cdo-normal.o cdo-nth_element.o cdo-par_io.o cdo-percentiles.o cdo-pipe.o cdo-process.o cdo-pstream.o cdo-pthread_debug.o cdo-readline.o cdo-realtime.o cdo-remaplib.o cdo-remapsort.o cdo-specspace.o cdo-statistic.o cdo-table.o cdo-timer.o cdo-userlog.o cdo-util.o cdo-vinterp.o cdo-zaxis.o -L/usr/lib -L/usr/local/lib ../libcdi/src/.libs/libcdi.so -lz -lm -pthread -Wl,-rpath -Wl,/usr/local/lib
cc -DHAVE_CONFIG_H -I. -I../libcdi/src -I/usr/include -I/usr/local/include -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -MT cdotest-cdotest.o -MD -MP -MF .deps/cdotest-cdotest.Tpo -c -o cdotest-cdotest.o `test -f 'cdotest.c' || echo './'`cdotest.c
mv -f .deps/cdotest-cdotest.Tpo .deps/cdotest-cdotest.Po
/bin/sh ../libtool --tag=CC --mode=link cc -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -L/usr/lib -L/usr/local/lib -pthread -o cdotest cdotest-cdotest.o ../libcdi/src/libcdi.la -lz -lm
libtool: link: cc -O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fno-strict-aliasing -D_THREAD_SAFE -pthread -o .libs/cdotest cdotest-cdotest.o -L/usr/lib -L/usr/local/lib ../libcdi/src/.libs/libcdi.so -lz -lm -pthread -Wl,-rpath -Wl,/usr/local/lib
gmake[3]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/src'
gmake[2]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/src'
Making all in contrib
gmake[2]: Entering directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/contrib'
gmake[2]: Nothing to be done for `all'.
gmake[2]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/contrib'
Making all in test
gmake[2]: Entering directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/test'
gmake[2]: Nothing to be done for `all'.
gmake[2]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1/test'
gmake[2]: Entering directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1'
gmake[2]: Nothing to be done for `all-am'.
gmake[2]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1'
gmake[1]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.1'
Unsupported file type (library support not compiled in)
*** Error code 1
Stop.
make: stopped in /usr/ports/science/cdo
===> Cleaning for cdo-1.6.1_1
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