[ports-i386@FreeBSD.org: PDL-2.4.2 failed on i386 6]

Kris Kennaway kris at obsecurity.org
Sat Feb 25 06:10:08 PST 2006


FYI; can you please investigate and/or report to the developers?  If
you are already aware of this problem but do not yet have a fix,
please mark the port BROKEN in the appropriate case, so that users do
not unexpectedly encounter it.

See http://pointyhat.freebsd.org for the full log.

Thanks,
Kris

----- Forwarded message from User Ports-i386 <ports-i386 at FreeBSD.org> -----

X-Original-To: kkenn at localhost
Delivered-To: kkenn at localhost.obsecurity.org
X-Original-To: kris at FreeBSD.org
Delivered-To: kris at FreeBSD.org
Date: Sat, 25 Feb 2006 07:30:48 GMT
From: User Ports-i386 <ports-i386 at FreeBSD.org>
To: freebsd+buildfail at lovett.com, kris at FreeBSD.org
Subject: PDL-2.4.2 failed on i386 6
X-UIDL: !Yp!!HDf"!'8%#!)%8!!
X-Bogosity: Ham, tests=bogofilter, spamicity=0.000000, version=1.0.1

building PDL-2.4.2 on gohan34.freebsd.org
in directory /x/tmp/6/chroot/90309
maintained by: perl at FreeBSD.org
port directory: /usr/ports/math/PDL
build started at Sat Feb 25 07:18:47 UTC 2006
FETCH_DEPENDS=
PATCH_DEPENDS=perl-5.8.8.tbz
EXTRACT_DEPENDS=perl-5.8.8.tbz
BUILD_DEPENDS=expat-2.0.0_1.tbz fftw-2.1.5_3.tbz fontconfig-2.3.2_3,1.tbz freetype2-2.1.10_3.tbz gd-2.0.33_4,1.tbz gsl-1.6_1.tbz jpeg-6b_4.tbz libdrm-2.0_1.tbz libltdl-1.5.22.tbz libunicode-0.4_5.tbz p5-Astro-FITS-Header-2.8.1.tbz p5-Digest-1.14.tbz p5-Digest-MD5-2.36.tbz p5-ExtUtils-F77-1.14.tbz p5-Filter-1.32.tbz p5-Inline-0.44.tbz p5-MIME-Base64-3.07.tbz p5-Parse-RecDescent-1.94.tbz p5-ReadLine-Perl-1.0203.tbz p5-Text-Balanced-1.95.tbz perl-5.8.8.tbz pgperl-2.18.tbz pgplot-5.2.2_3.tbz pkgconfig-0.20.tbz plplot-5.5.2.tbz png-1.2.8_3.tbz qhull-1.0_1.tbz xorg-libraries-6.9.0.tbz
RUN_DEPENDS=expat-2.0.0_1.tbz fftw-2.1.5_3.tbz fontconfig-2.3.2_3,1.tbz freetype2-2.1.10_3.tbz gd-2.0.33_4,1.tbz gsl-1.6_1.tbz jpeg-6b_4.tbz libdrm-2.0_1.tbz libltdl-1.5.22.tbz libunicode-0.4_5.tbz p5-Astro-FITS-Header-2.8.1.tbz p5-Digest-1.14.tbz p5-Digest-MD5-2.36.tbz p5-ExtUtils-F77-1.14.tbz p5-Filter-1.32.tbz p5-Inline-0.44.tbz p5-MIME-Base64-3.07.tbz p5-Parse-RecDescent-1.94.tbz p5-ReadLine-Perl-1.0203.tbz p5-Text-Balanced-1.95.tbz perl-5.8.8.tbz pgperl-2.18.tbz pgplot-5.2.2_3.tbz pkgconfig-0.20.tbz plplot-5.5.2.tbz png-1.2.8_3.tbz qhull-1.0_1.tbz xorg-libraries-6.9.0.tbz
prefixes: LOCALBASE=usr/local X11BASE=usr/X11R6
add_pkg
================================================================
====================<phase 1: make checksum>====================
=> PDL-2.4.2.tar.gz doesn't seem to exist in /tmp/distfiles/.
=> Attempting to fetch from ftp://ftp-master.freebsd.org/pub/FreeBSD/ports/distfiles/.
PDL-2.4.2.tar.gz                                      2100 kB 1525 kBps
=> MD5 Checksum OK for PDL-2.4.2.tar.gz.
=> SHA256 Checksum OK for PDL-2.4.2.tar.gz.
================================================================
====================<phase 2: make extract>====================
add_pkg perl-5.8.8.tbz
adding dependencies
pkg_add perl-5.8.8.tbz
Removing stale symlinks from /usr/bin...
    Skipping /usr/bin/perl
    Skipping /usr/bin/perl5
Done.
Creating various symlinks in /usr/bin...
    Symlinking /usr/local/bin/perl5.8.8 to /usr/bin/perl
    Symlinking /usr/local/bin/perl5.8.8 to /usr/bin/perl5
Done.
Cleaning up /etc/make.conf... Done.
Spamming /etc/make.conf... Done.
Cleaning up /etc/manpath.config... Done.
Spamming /etc/manpath.config... Done.
===>  Extracting for PDL-2.4.2
=> MD5 Checksum OK for PDL-2.4.2.tar.gz.
=> SHA256 Checksum OK for PDL-2.4.2.tar.gz.
===>   PDL-2.4.2 depends on file: /usr/local/bin/perl5.8.8 - found
You can build additional functionality into PDL by defining KITCHEN_SINK
Deleting perl-5.8.8
Removing stale symlinks from /usr/bin...
    Removing /usr/bin/perl
    Removing /usr/bin/perl5
Done.
Cleaning up /etc/make.conf... Done.
Cleaning up /etc/manpath.config... Done.
================================================================
====================<phase 3: make patch>====================
add_pkg perl-5.8.8.tbz
adding dependencies
pkg_add perl-5.8.8.tbz
Removing stale symlinks from /usr/bin...
    Skipping /usr/bin/perl
    Skipping /usr/bin/perl5
Done.
Creating various symlinks in /usr/bin...
    Symlinking /usr/local/bin/perl5.8.8 to /usr/bin/perl
    Symlinking /usr/local/bin/perl5.8.8 to /usr/bin/perl5
Done.
Cleaning up /etc/make.conf... Done.
Spamming /etc/make.conf... Done.
Cleaning up /etc/manpath.config... Done.
Spamming /etc/manpath.config... Done.
===>  Patching for PDL-2.4.2
===>   PDL-2.4.2 depends on file: /usr/local/bin/perl5.8.8 - found
===>  Applying FreeBSD patches for PDL-2.4.2
Deleting perl-5.8.8
Removing stale symlinks from /usr/bin...
    Removing /usr/bin/perl
    Removing /usr/bin/perl5
Done.
Cleaning up /etc/make.conf... Done.
Cleaning up /etc/manpath.config... Done.
================================================================
====================<phase 4: make build>====================
add_pkg expat-2.0.0_1.tbz fftw-2.1.5_3.tbz fontconfig-2.3.2_3,1.tbz freetype2-2.1.10_3.tbz gd-2.0.33_4,1.tbz gsl-1.6_1.tbz jpeg-6b_4.tbz libdrm-2.0_1.tbz libltdl-1.5.22.tbz libunicode-0.4_5.tbz p5-Astro-FITS-Header-2.8.1.tbz p5-Digest-1.14.tbz p5-Digest-MD5-2.36.tbz p5-ExtUtils-F77-1.14.tbz p5-Filter-1.32.tbz p5-Inline-0.44.tbz p5-MIME-Base64-3.07.tbz p5-Parse-RecDescent-1.94.tbz p5-ReadLine-Perl-1.0203.tbz p5-Text-Balanced-1.95.tbz perl-5.8.8.tbz pgperl-2.18.tbz pgplot-5.2.2_3.tbz pkgconfig-0.20.tbz plplot-5.5.2.tbz png-1.2.8_3.tbz qhull-1.0_1.tbz xorg-libraries-6.9.0.tbz
adding dependencies
pkg_add expat-2.0.0_1.tbz
pkg_add fftw-2.1.5_3.tbz
pkg_add fontconfig-2.3.2_3,1.tbz
Running fc-cache to build fontconfig cache...
fc-cache: "/usr/X11R6/lib/X11/fonts": caching, 0 fonts, 1 dirs
fc-cache: "/usr/X11R6/lib/X11/fonts/local": caching, 0 fonts, 0 dirs
fc-cache: "/root/.fonts": skipping, no such directory
fc-cache: succeeded
pkg_add freetype2-2.1.10_3.tbz
skipping freetype2-2.1.10_3, already added
pkg_add gd-2.0.33_4,1.tbz
pkg_add gsl-1.6_1.tbz
pkg_add jpeg-6b_4.tbz
skipping jpeg-6b_4, already added
pkg_add libdrm-2.0_1.tbz
pkg_add libltdl-1.5.22.tbz
pkg_add libunicode-0.4_5.tbz
pkg_add p5-Astro-FITS-Header-2.8.1.tbz
Removing stale symlinks from /usr/bin...
    Skipping /usr/bin/perl
    Skipping /usr/bin/perl5
Done.
Creating various symlinks in /usr/bin...
    Symlinking /usr/local/bin/perl5.8.8 to /usr/bin/perl
    Symlinking /usr/local/bin/perl5.8.8 to /usr/bin/perl5
Done.
Cleaning up /etc/make.conf... Done.
Spamming /etc/make.conf... Done.
Cleaning up /etc/manpath.config... Done.
Spamming /etc/manpath.config... Done.
pkg_add p5-Digest-1.14.tbz
pkg_add p5-Digest-MD5-2.36.tbz
pkg_add p5-ExtUtils-F77-1.14.tbz
pkg_add p5-Filter-1.32.tbz
pkg_add p5-Inline-0.44.tbz
pkg_add p5-MIME-Base64-3.07.tbz
skipping p5-MIME-Base64-3.07, already added
pkg_add p5-Parse-RecDescent-1.94.tbz
skipping p5-Parse-RecDescent-1.94, already added
pkg_add p5-ReadLine-Perl-1.0203.tbz
pkg_add p5-Text-Balanced-1.95.tbz
skipping p5-Text-Balanced-1.95, already added
pkg_add perl-5.8.8.tbz
skipping perl-5.8.8, already added
pkg_add pgperl-2.18.tbz
pkg_add pgplot-5.2.2_3.tbz
skipping pgplot-5.2.2_3, already added
pkg_add pkgconfig-0.20.tbz
skipping pkgconfig-0.20, already added
pkg_add plplot-5.5.2.tbz
pkg_add png-1.2.8_3.tbz
skipping png-1.2.8_3, already added
pkg_add qhull-1.0_1.tbz
skipping qhull-1.0_1, already added
pkg_add xorg-libraries-6.9.0.tbz
skipping xorg-libraries-6.9.0, already added
===>   PDL-2.4.2 depends on file: /usr/local/lib/perl5/site_perl/5.8.8/mach/PGPLOT.pm - found
===>   PDL-2.4.2 depends on file: /usr/local/lib/perl5/site_perl/5.8.8/ExtUtils/F77.pm - found
===>   PDL-2.4.2 depends on file: /usr/local/lib/perl5/site_perl/5.8.8/Inline.pm - found
===>   PDL-2.4.2 depends on file: /usr/local/lib/perl5/site_perl/5.8.8/mach/Filter/Util/Call.pm - found
===>   PDL-2.4.2 depends on file: /usr/local/lib/perl5/site_perl/5.8.8/Astro/FITS/Header.pm - found
===>   PDL-2.4.2 depends on file: /usr/local/lib/perl5/site_perl/5.8.8/mach/PGPLOT.pm - found
===>   PDL-2.4.2 depends on file: /usr/local/lib/perl5/site_perl/5.8.8/Term/ReadLine/readline.pm - found
===>   PDL-2.4.2 depends on file: /usr/local/bin/perl5.8.8 - found
===>   PDL-2.4.2 depends on shared library: plplotd.10 - found
===>   PDL-2.4.2 depends on shared library: fftw.2 - found
===>   PDL-2.4.2 depends on shared library: gsl.7 - found
===>   PDL-2.4.2 depends on shared library: X11.6 - found
===>  Configuring for PDL-2.4.2
making PDL_B...
making PDL_S...
making PDL_US...
making PDL_L...
making PDL_LL...
making PDL_F...
making PDL_D...
Extracting Types.pm
Checking if your kit is complete...
Looks good
Loaded ExtUtils::F77 version 1.14
Found compiler f77
Writing Makefile for PDL::pod
Writing Makefile for Inline
Writing Makefile for PDL::PP
Writing Makefile for PDL::NiceSlice
Trying to figure out POSIX threads support ...
	Saw pthread.h. Fine.
On FreeBSD try building perl with libc_r instead of libc
	==> PDL will be built without POSIX thread support.
	==> *NOTE*: PDL threads are unrelated to perl threads (usethreads=y)!
	==> Enabling perl threads will not help!

Trying to figure out endian-ness of machine... It is little endian
Writing Makefile for PDL::Core

	building PDL without bad value support (WITH_BADVAL!=1)

Writing Makefile for PDL::Bad
Writing Makefile for PDL::Ops
Writing Makefile for PDL::Ufunc
Writing Makefile for PDL::Primitive
Writing Makefile for PDL::Slices
Writing Makefile for PDL::Tests
Source of functions
System:       acosh asinh atanh erf erfc j0 j1 jn rint y1
Distribution: erfi fixy0 fixyn infinity nan ndtri polyroots

Writing Makefile for PDL::Math
Writing Makefile for PDL::MatrixOps
Writing Makefile for PDL::Complex
Writing Makefile for PDL
Writing Makefile for PDL::Demos
Writing Makefile for PDL::Pod::Parser
Writing Makefile for PDL::Doc

   Trying OpenGL configuration -L/usr/X11R6/lib -lGL -lGLU -lXext -lX11

     Trying -L/usr/X11R6/lib -lGL -lGLU -lXext -lX11...
     		YES

    Success using -L/usr/X11R6/lib -lGL -lGLU -lXext -lX11 -DGL_GLEXT_LEGACY

Writing Makefile for PDL::Graphics::TriD::Rout
Writing Makefile for PDL::Graphics::VRML
Writing Makefile for PDL::Graphics::OpenGL
Writing Makefile for PDL::Graphics::OpenGLQ
Writing Makefile for PDL::Graphics::TriD
Writing Makefile for PDL::Graphics::PGPLOT::Window
Writing Makefile for PDL::Graphics::PGPLOT
Writing Makefile for PDL::Graphics::LUT::tables::DATA
Writing Makefile for PDL::Graphics::LUT::ramps::DATA
Writing Makefile for PDL::Graphics::LUT

      Not building PDL::Graphics::Karma, turn on WITH_KARMA if this is incorrect

writing dummy Makefile
Writing Makefile for PDL::Graphics::IIS

Checking PDL::Graphics::PLplot...
found_plplot is 1
	Succeeded linking PLplot with -L/usr/local/lib -lplplotd
	plsmem function found, in-memory plotting available!
	plsvect function found, vector plotting available!
	plpoly3 needs 6 arguments => version 5.2.0 or later!
Writing Makefile for PDL::Graphics::PLplot
Writing Makefile for PDL::Graphics::Limits
Writing Makefile for PDL

   Building PDL::IO::Browser. Turn off WITH_IO_BROWSER if this is incorrect.

Writing Makefile for PDL::IO::FastRaw
Writing Makefile for PDL::IO::Misc
Writing Makefile for PDL::IO::FlexRaw
Writing Makefile for PDL::IO::Pnm
Writing Makefile for PDL::IO::NDF
Writing Makefile for PDL::IO::Storable
Writing Makefile for PDL::IO::FITS
Writing Makefile for PDL::IO::Browser
Writing Makefile for PDL::IO
Writing Makefile for PDL::Opt::Simplex
Writing Makefile for PDL::Opt
Writing Makefile for PDL::ImageRGB
Writing Makefile for PDL::Fit::Gaussian
Writing Makefile for PDL::Fit
Writing Makefile for PDL::FFT
Writing Makefile for PDL::Filter
Writing Makefile for PDL::Image2D
Writing Makefile for PDL::ImageND
Writing Makefile for PDL::CallExt
ExtUtils::F77: Using system=Freebsd compiler=F77
Checking for gcc in disguise:
Compiler is gcc version 3.4.4 [FreeBSD] 20050518
Runtime: -L/usr/lib  -lg2c  -lm -L/usr/lib -lgcc
ExtUtils::F77: Validating -L/usr/lib  -lg2c  -lm -L/usr/lib -lgcc   [ok]
ExtUtils::F77: There does not appear to be any configuration info about
ExtUtils::F77: the F77 compiler name. Will assume 'f77'.
ExtUtils::F77: Compiler: f77
ExtUtils::F77: There does not appear to be any configuration info about
ExtUtils::F77: the options for the F77 compiler. Will assume none
ExtUtils::F77: necessary.
ExtUtils::F77: Cflags: 
(ExtUtils Version 1.14)
Compiling the test Fortran program...
Executing the test program...
Congratulations you seem to have a working f77!

   Building PDL::Slatec. Turn off WITH_SLATEC if there are any problems

Writing Makefile for PDL::Slatec
     Trying gsl diff libraries...
     		YES

   Building PDL::GSL::DIFF.Turn off WITH_GSL if there are any problems

Writing Makefile for PDL::GSL::DIFF
     Trying gsl numerical integration libraries...
     		YES

   Building PDL::GSL::INTEG.Turn off WITH_GSL if there are any problems

Writing Makefile for PDL::GSL::INTEG
     Trying gsl interp libraries...
     		YES

   Building PDL::GSL::INTERP.Turn off WITH_GSL if there are any problems

Writing Makefile for PDL::GSL::INTERP
     Trying gsl rng libraries...
     		YES

   Building PDL::GSL::RNG.Turn off WITH_GSL if there are any problems

Writing Makefile for PDL::GSL::RNG
     Trying gsl SF libraries...
     		YES

   Building PDL::GSLSF.Turn off WITH_GSL if there are any problems

Writing Makefile for PDL::GSLSF::AIRY
Writing Makefile for PDL::GSLSF::BESSEL
Writing Makefile for PDL::GSLSF::CLAUSEN
Writing Makefile for PDL::GSLSF::COULOMB
Writing Makefile for PDL::GSLSF::COUPLING
Writing Makefile for PDL::GSLSF::DAWSON
Writing Makefile for PDL::GSLSF::DEBYE
Writing Makefile for PDL::GSLSF::DILOG
Writing Makefile for PDL::GSLSF::ELEMENTARY
Writing Makefile for PDL::GSLSF::ELLINT
Writing Makefile for PDL::GSLSF::ELLJAC
Writing Makefile for PDL::GSLSF::ERF
Writing Makefile for PDL::GSLSF::EXP
Writing Makefile for PDL::GSLSF::EXPINT
Writing Makefile for PDL::GSLSF::FERMI_DIRAC
Writing Makefile for PDL::GSLSF::GAMMA
Writing Makefile for PDL::GSLSF::GEGENBAUER
Writing Makefile for PDL::GSLSF::HYPERG
Writing Makefile for PDL::GSLSF::LAGUERRE
Writing Makefile for PDL::GSLSF::LEGENDRE
Writing Makefile for PDL::GSLSF::LOG
Writing Makefile for PDL::GSLSF::POLY
Writing Makefile for PDL::GSLSF::POW_INT
Writing Makefile for PDL::GSLSF::PSI
Writing Makefile for PDL::GSLSF::SYNCHROTRON
Writing Makefile for PDL::GSLSF::TRANSPORT
Writing Makefile for PDL::GSLSF::TRIG
Writing Makefile for PDL::GSLSF::ZETA
Writing Makefile for PDL::GSLSF
Writing Makefile for PDL::GSL
Found FFTW2 double version in /usr/local/include/fftw.h !
 FFTW Libs also found.
Building double version

   Building PDL::FFTW. Turn off WITH_FFTW if there are any problems

Writing Makefile for PDL::FFTW
Writing Basic/Core/Config.pm
Writing Makefile for PDL::Transform::Cartography
Writing Makefile for PDL::Transform
Writing Makefile for PDL::Lib
Writing Makefile for PDL
===>  Building for PDL-2.4.2
Graph cycles through pm_to_blib

cp Reduce.pm ../blib/lib/PDL/Reduce.pm
cp PDL.pm ../blib/lib/PDL.pm
cp Lite.pm ../blib/lib/PDL/Lite.pm
cp Options.pm ../blib/lib/PDL/Options.pm
cp LiteF.pm ../blib/lib/PDL/LiteF.pm
cp default.perldlrc ../blib/lib/PDL/default.perldlrc
cp AutoLoader.pm ../blib/lib/PDL/AutoLoader.pm
cp Lvalue.pm ../blib/lib/PDL/Lvalue.pm
cp Matrix.pm ../blib/lib/PDL/Matrix.pm
podselect ../Gen/Inline/Pdlpp.pm > PP-Inline.pod
cp BadValues.pod ../../blib/lib/PDL/BadValues.pod
cp Impatient.pod ../../blib/lib/PDL/Impatient.pod
cp Internals.pod ../../blib/lib/PDL/Internals.pod
cp Tips.pod ../../blib/lib/PDL/Tips.pod
cp PP-Inline.pod ../../blib/lib/PDL/PP-Inline.pod
cp Dataflow.pod ../../blib/lib/PDL/Dataflow.pod
cp Delta.pod ../../blib/lib/PDL/Delta.pod
cp FAQ.pod ../../blib/lib/PDL/FAQ.pod
cp Philosophy.pod ../../blib/lib/PDL/Philosophy.pod
cp Indexing.pod ../../blib/lib/PDL/Indexing.pod
cp Objects.pod ../../blib/lib/PDL/Objects.pod
cp Intro.pod ../../blib/lib/PDL/Intro.pod
cp PP.pod ../../blib/lib/PDL/PP.pod
cp API.pod ../../blib/lib/PDL/API.pod
Manifying ../../blib/man1/PDL::Impatient.1
Manifying ../../blib/man1/PDL::BadValues.1
Manifying ../../blib/man1/PDL::Internals.1
Manifying ../../blib/man1/PDL::PP-Inline.1
Manifying ../../blib/man1/PDL::Tips.1
Manifying ../../blib/man1/PDL::Dataflow.1
Manifying ../../blib/man1/PDL::Delta.1
Manifying ../../blib/man1/PDL::Philosophy.1
Manifying ../../blib/man1/PDL::FAQ.1
Manifying ../../blib/man1/PDL::Objects.1
Manifying ../../blib/man1/PDL::Indexing.1
Manifying ../../blib/man1/pdl.1
Manifying ../../blib/man1/PDL::PP.1
Manifying ../../blib/man1/PDL::API.1
/usr/local/bin/perl5.8.8 PP/dump.pp > PP/Dump.pm.tmp
mv PP/Dump.pm.tmp PP/Dump.pm
Graph cycles through pm_to_blib

cp Pdlpp.pm ../../../blib/lib/Inline/Pdlpp.pm
cp MakePdlppInstallable.pm ../../../blib/lib/Inline/MakePdlppInstallable.pm
Manifying ../../../blib/man3/Pdlpp.3
cp pptemplate ../../blib/script/pptemplate
cp: pptemplate: No such file or directory
*** Error code 1

Stop in /work/a/ports/math/PDL/work/PDL-2.4.2/Basic/Gen.
*** Error code 1

Stop in /work/a/ports/math/PDL/work/PDL-2.4.2/Basic.
*** Error code 1

Stop in /work/a/ports/math/PDL/work/PDL-2.4.2.
*** Error code 1

Stop in /a/ports/math/PDL.
================================================================
build of /usr/ports/math/PDL ended at Sat Feb 25 07:30:37 UTC 2006


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