cvs commit: ports/science Makefile ports/science/massxpert Makefile distinfo pkg-descr pkg-plist

[Max Brazhnikov]

USE_LDCONFIG is excessive here, since no shared libraries are installed.
man pages shouldn't be recorded in plist

Max

On Thu, 20 May 2010 09:43:14 +0000 (UTC), Wen Heping wrote:
> wen         2010-05-20 09:43:14 UTC
> 
>   FreeBSD ports repository
> 
>   Modified files:
>     science              Makefile
>   Added files:
>     science/massxpert    Makefile distinfo pkg-descr pkg-plist
>   Log:
>   The massXpert project aims at providing (bio)chemists with a software
>   package allowing the following:
> 
>   * User-specific atom definitions and polymer chemistry definitions;
>   * Powerful sequence editing with user-defined glyphs for each monomer
>   and monomer chemical modification. Multi-region selections;
>   * Polymer sequence chemical/enzymatic cleavage;
>   * Intramolecular cross-linking, like disulfide bonds with total
> resolution of the peptides generated upon enzymatic cleavage;
>   * Gas-phase fragmentation of oligomers;
>   * Mass-to-charge ratio calculations with inline change of ionization
> agent; * Calculation of net electrical charge and of isoelectric point
> (even by taking into account monomer modifications if polymer is a
> protein); * Simulation of isotopic patterns for any chemical formula and z
> charge; * A number of plugins allow 1) translation of the sequence from
> one format to another (using a dictionary, like between the 1-letter code
> and the 3-letter code of proteins) 2) conversion of number format
> according to any localized number format 3) sort mass lists.
> 
>   PR:             ports/146564
>   Submitted by:   Gvozdikov Veniamin <g.veniamin at googlemail.com>
> 
>   Revision  Changes    Path
>   1.189     +1 -0      ports/science/Makefile
>   1.1       +28 -0     ports/science/massxpert/Makefile (new)
>   1.1       +3 -0      ports/science/massxpert/distinfo (new)
>   1.1       +20 -0     ports/science/massxpert/pkg-descr (new)
>   1.1       +225 -0    ports/science/massxpert/pkg-plist (new)