cvs commit: ports/biology Makefile ports/biology/njplot Makefile distinfo pkg-descr ports/biology/njplot/files patch-makefile

[Pav Lucistnik]

pav         2008-05-14 14:07:01 UTC

  FreeBSD ports repository

  Modified files:
    biology              Makefile 
  Added files:
    biology/njplot       Makefile distinfo pkg-descr 
    biology/njplot/files patch-makefile 
  Log:
  NJplot is a tree drawing program able to draw any phylogenetic tree expressed
  in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
  package). NJplot is especially convenient for rooting the unrooted trees
  obtained from parsimony, distance or maximum likelihood tree-building methods.
  
  The package contains the following programs:
  njplot      - draw phylogenetic trees and interactively modify them
  newicktops  - non-interactive version rendering into a PostScript file
  newicktotxt - non-interactive version rendering into a text file
  unrooted    - draw unrooted circular trees
  
  If you use NJplot in a published work, please cite the following reference:
  
  Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
  biological sequence banks. Biochimie, 78, 364-369.
  
  WWW: http://pbil.univ-lyon1.fr/software/njplot.html
  
  PR:             ports/118438
  Submitted by:   Motomichi Matsuzaki <mzaki at biol.s.u-tokyo.ac.jp>
  
  Revision  Changes    Path
  1.97      +1 -0      ports/biology/Makefile
  1.1       +55 -0     ports/biology/njplot/Makefile (new)
  1.1       +3 -0      ports/biology/njplot/distinfo (new)
  1.1       +69 -0     ports/biology/njplot/files/patch-makefile (new)
  1.1       +17 -0     ports/biology/njplot/pkg-descr (new)